RNA–Protein interactions for RNA: ENST00000535191.5

NEK4-207, Transcript of NIMA related kinase 4, humanhuman

TSL 2 BASIC

Gene NEK4, Length 2,452 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-207ENST00000535191 ECSITQ9BQ95 431 aa13.88□□□□□ -0.19
NEK4-207ENST00000535191 TTLL2Q9BWV7 592 aa13.88□□□□□ -0.19
NEK4-207ENST00000535191 NACA2Q9H009 215 aa13.88□□□□□ -0.19
NEK4-207ENST00000535191 TNFRSF12AQ9NP84 129 aa13.88□□□□□ -0.19
NEK4-207ENST00000535191 ZFP37Q9Y6Q3 630 aaPredicted RBP13.88□□□□□ -0.19
NEK4-207ENST00000535191 BRCA2P51587 3418 aa13.87□□□□□ -0.19
NEK4-207ENST00000535191 HTTP42858 3142 aa13.87□□□□□ -0.19
NEK4-207ENST00000535191 CFLARO15519 480 aa13.87□□□□□ -0.19
NEK4-207ENST00000535191 ADAM12O43184 909 aa13.87□□□□□ -0.19
NEK4-207ENST00000535191 SKAP2O75563 359 aaPredicted RBP13.87□□□□□ -0.19
NEK4-207ENST00000535191 INHAP05111 366 aa13.87□□□□□ -0.19
NEK4-207ENST00000535191 SLC11A2P49281 568 aa13.87□□□□□ -0.19
NEK4-207ENST00000535191 SATB1Q01826 763 aa13.87□□□□□ -0.19
NEK4-207ENST00000535191 DSG1Q02413 1049 aa13.87□□□□□ -0.19
NEK4-207ENST00000535191 ART3Q13508 389 aa13.87□□□□□ -0.19
NEK4-207ENST00000535191 TMEM154Q6P9G4 183 aa13.87□□□□□ -0.19
NEK4-207ENST00000535191 SDCCAG8Q86SQ7 713 aaPredicted RBP13.87□□□□□ -0.19
NEK4-207ENST00000535191 OR52K2Q8NGK3 314 aa13.87□□□□□ -0.19
NEK4-207ENST00000535191 OR4L1Q8NH43 312 aa13.87□□□□□ -0.19
NEK4-207ENST00000535191 CDK5RAP1Q96SZ6 601 aaKnown RBP13.87□□□□□ -0.19
NEK4-207ENST00000535191 ADAMTS6Q9UKP5 1117 aa13.87□□□□□ -0.19
NEK4-207ENST00000535191 PLXNA3P51805 1871 aa13.87□□□□□ -0.19
NEK4-207ENST00000535191 TRPA1O75762 1119 aa13.87□□□□□ -0.19
NEK4-207ENST00000535191 NDST3O95803 873 aa13.87□□□□□ -0.19
NEK4-207ENST00000535191 HOXD9P28356 352 aaPredicted RBP13.87□□□□□ -0.19
NEK4-207ENST00000535191 GALNT1Q10472 559 aaPredicted RBP13.87□□□□□ -0.19
NEK4-207ENST00000535191 ILF2Q12905 390 aaKnown RBP13.87□□□□□ -0.19
NEK4-207ENST00000535191 TCTN1Q2MV58 587 aa13.87□□□□□ -0.19
NEK4-207ENST00000535191 CAPRIN2Q6IMN6 1127 aaKnown RBP13.87□□□□□ -0.19
NEK4-207ENST00000535191 BNC2Q6ZN30 1099 aaPredicted RBP13.87□□□□□ -0.19
NEK4-207ENST00000535191 NPAS4Q8IUM7 802 aa13.87□□□□□ -0.19
NEK4-207ENST00000535191 REM2Q8IYK8 340 aaPredicted RBP13.87□□□□□ -0.19
NEK4-207ENST00000535191 BCL7CQ8WUZ0 217 aaPredicted RBP13.87□□□□□ -0.19
NEK4-207ENST00000535191 ZNF512Q96ME7 567 aaPredicted RBP13.87□□□□□ -0.19
NEK4-207ENST00000535191 TMEM175Q9BSA9 504 aa13.87□□□□□ -0.19
NEK4-207ENST00000535191 SEPT3Q9UH03 358 aa13.87□□□□□ -0.19
NEK4-207ENST00000535191 MTF2Q9Y483 593 aaPredicted RBP13.87□□□□□ -0.19
NEK4-207ENST00000535191 TRAF6Q9Y4K3 522 aa13.87□□□□□ -0.19
NEK4-207ENST00000535191 DPPA5A6NC42 116 aa13.86□□□□□ -0.19
NEK4-207ENST00000535191 TCAF2A6NFQ2 919 aa13.86□□□□□ -0.19
NEK4-207ENST00000535191 GJB5O95377 273 aa13.86□□□□□ -0.19
NEK4-207ENST00000535191 PENKP01210 267 aaPredicted RBP13.86□□□□□ -0.19
NEK4-207ENST00000535191 ENO3P13929 434 aaPredicted RBP13.86□□□□□ -0.19
NEK4-207ENST00000535191 FDXRP22570 491 aa13.86□□□□□ -0.19
NEK4-207ENST00000535191 PMLP29590 882 aa13.86□□□□□ -0.19
NEK4-207ENST00000535191 CDH4P55283 916 aa13.86□□□□□ -0.19
NEK4-207ENST00000535191 RPS24P62847 133 aaKnown RBP13.86□□□□□ -0.19
NEK4-207ENST00000535191 TIAL1Q01085 375 aaKnown RBP eCLIP13.86□□□□□ -0.19
NEK4-207ENST00000535191 SEMA3AQ14563 771 aa13.86□□□□□ -0.19
NEK4-207ENST00000535191 ALG1LQ6GMV1 187 aa13.86□□□□□ -0.19
NEK4-207ENST00000535191 DENND1CQ8IV53 801 aa13.86□□□□□ -0.19
NEK4-207ENST00000535191 PGAM4Q8N0Y7 254 aa13.86□□□□□ -0.19
NEK4-207ENST00000535191 PELI3Q8N2H9 469 aa13.86□□□□□ -0.19
NEK4-207ENST00000535191 RYBPQ8N488 228 aaPredicted RBP13.86□□□□□ -0.19
NEK4-207ENST00000535191 TRIB3Q96RU7 358 aa13.86□□□□□ -0.19
NEK4-207ENST00000535191 GSTO2Q9H4Y5 243 aa13.86□□□□□ -0.19
NEK4-207ENST00000535191 MEAF6Q9HAF1 191 aa13.86□□□□□ -0.19
NEK4-207ENST00000535191 CATSPERZQ9NTU4 200 aa13.86□□□□□ -0.19
NEK4-207ENST00000535191 VPS28Q9UK41 221 aa13.86□□□□□ -0.19
NEK4-207ENST00000535191 RIMKLBQ9ULI2 386 aa13.86□□□□□ -0.19
NEK4-207ENST00000535191 PHF24Q9UPV7 400 aa13.86□□□□□ -0.19
NEK4-207ENST00000535191 DOCK4Q8N1I0 1966 aa13.86□□□□□ -0.19
NEK4-207ENST00000535191 HOXA2O43364 376 aa13.86□□□□□ -0.19
NEK4-207ENST00000535191 SUPT7LO94864 414 aa13.86□□□□□ -0.19
NEK4-207ENST00000535191 RAG1P15918 1043 aa13.86□□□□□ -0.19
NEK4-207ENST00000535191 HOXB8P17481 243 aaPredicted RBP13.86□□□□□ -0.19
NEK4-207ENST00000535191 C1QTNF8P60827 252 aa13.86□□□□□ -0.19
NEK4-207ENST00000535191 LRRC36Q1X8D7 754 aa13.86□□□□□ -0.19
NEK4-207ENST00000535191 ZNF423Q2M1K9 1284 aa13.86□□□□□ -0.19
NEK4-207ENST00000535191 ZNF678Q5SXM1 525 aa13.86□□□□□ -0.19
NEK4-207ENST00000535191 CHSY3Q70JA7 882 aa13.86□□□□□ -0.19
NEK4-207ENST00000535191 CRIPAKQ8N1N5 446 aa13.86□□□□□ -0.19
NEK4-207ENST00000535191 PTERQ96BW5 349 aa13.86□□□□□ -0.19
NEK4-207ENST00000535191 CDKN2AIPNLQ96HQ2 116 aa13.86□□□□□ -0.19
NEK4-207ENST00000535191 PSKH2Q96QS6 385 aa13.86□□□□□ -0.19
NEK4-207ENST00000535191 MGME1Q9BQP7 344 aa13.86□□□□□ -0.19
NEK4-207ENST00000535191 TRMOQ9BU70 441 aa13.86□□□□□ -0.19
NEK4-207ENST00000535191 MRPL9Q9BYD2 267 aaKnown RBP13.86□□□□□ -0.19
NEK4-207ENST00000535191 RETREG1Q9H6L5 497 aa13.86□□□□□ -0.19
NEK4-207ENST00000535191 WDR41Q9HAD4 459 aa13.86□□□□□ -0.19
NEK4-207ENST00000535191 UBA2Q9UBT2 640 aaPredicted RBP13.86□□□□□ -0.19
NEK4-207ENST00000535191 MYLKQ15746 1914 aa13.86□□□□□ -0.19
NEK4-207ENST00000535191 VWA8A3KMH1 1905 aa13.85□□□□□ -0.19
NEK4-207ENST00000535191 H3BNC9 293 aa13.85□□□□□ -0.19
NEK4-207ENST00000535191 UBFD1O14562 309 aaKnown RBP13.85□□□□□ -0.19
NEK4-207ENST00000535191 UBDO15205 165 aa13.85□□□□□ -0.19
NEK4-207ENST00000535191 KDELR3O43731 214 aa13.85□□□□□ -0.19
NEK4-207ENST00000535191 SMIM24O75264 130 aa13.85□□□□□ -0.19
NEK4-207ENST00000535191 GPC4O75487 556 aa13.85□□□□□ -0.19
NEK4-207ENST00000535191 CD1DP15813 335 aa13.85□□□□□ -0.19
NEK4-207ENST00000535191 RPL17P18621 184 aaKnown RBP13.85□□□□□ -0.19
NEK4-207ENST00000535191 TSPAN8P19075 237 aa13.85□□□□□ -0.19
NEK4-207ENST00000535191 OR1D2P34982 312 aa13.85□□□□□ -0.19
NEK4-207ENST00000535191 TUFMP49411 452 aaKnown RBP13.85□□□□□ -0.19
NEK4-207ENST00000535191 SCNN1BP51168 640 aa13.85□□□□□ -0.19
NEK4-207ENST00000535191 THOP1P52888 689 aa13.85□□□□□ -0.19
NEK4-207ENST00000535191 OXCT1P55809 520 aa13.85□□□□□ -0.19
NEK4-207ENST00000535191 CDC16Q13042 620 aa13.85□□□□□ -0.19
NEK4-207ENST00000535191 EML3Q32P44 896 aa13.85□□□□□ -0.19
NEK4-207ENST00000535191 PIGGQ5H8A4 983 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms