RNA–Protein interactions for RNA: ENST00000534716.2

NDUFS3-213, Transcript of NADH:ubiquinone oxidoreductase core subunit S3, humanhuman

TSL 2 BASIC

Gene NDUFS3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3-213ENST00000534716 BTBD6Q96KE9 485 aa18.89■□□□□ 0.61
NDUFS3-213ENST00000534716 CCDC3Q9BQI4 270 aa18.89■□□□□ 0.61
NDUFS3-213ENST00000534716 NOD2Q9HC29 1040 aa18.89■□□□□ 0.61
NDUFS3-213ENST00000534716 ASCL3Q9NQ33 180 aa18.89■□□□□ 0.61
NDUFS3-213ENST00000534716 B4GALT6Q9UBX8 382 aa18.89■□□□□ 0.61
NDUFS3-213ENST00000534716 DOLKQ9UPQ8 538 aa18.89■□□□□ 0.61
NDUFS3-213ENST00000534716 PCDHGA8Q9Y5G5 932 aa18.89■□□□□ 0.61
NDUFS3-213ENST00000534716 ENTPD2Q9Y5L3 495 aa18.89■□□□□ 0.61
NDUFS3-213ENST00000534716 A0A1W2PNU3 283 aaPredicted RBP18.88■□□□□ 0.61
NDUFS3-213ENST00000534716 TMEM202A6NGA9 273 aa18.88■□□□□ 0.61
NDUFS3-213ENST00000534716 MYO1FO00160 1098 aa18.88■□□□□ 0.61
NDUFS3-213ENST00000534716 HNRNPH3P31942 346 aaKnown RBP18.88■□□□□ 0.61
NDUFS3-213ENST00000534716 ARSEP51690 589 aa18.88■□□□□ 0.61
NDUFS3-213ENST00000534716 TLE3Q04726 772 aa18.88■□□□□ 0.61
NDUFS3-213ENST00000534716 MARC1Q5VT66 337 aa18.88■□□□□ 0.61
NDUFS3-213ENST00000534716 PNCKQ6P2M8 343 aa18.88■□□□□ 0.61
NDUFS3-213ENST00000534716 OGFOD3Q6PK18 319 aa18.88■□□□□ 0.61
NDUFS3-213ENST00000534716 ATPAF2Q8N5M1 289 aa18.88■□□□□ 0.61
NDUFS3-213ENST00000534716 TEX26Q8N6G2 289 aa18.88■□□□□ 0.61
NDUFS3-213ENST00000534716 KYQ8NBH2 561 aa18.88■□□□□ 0.61
NDUFS3-213ENST00000534716 PDXPQ96GD0 296 aa18.88■□□□□ 0.61
NDUFS3-213ENST00000534716 BBC3Q96PG8 261 aaPredicted RBP18.88■□□□□ 0.61
NDUFS3-213ENST00000534716 PHTF1Q9UMS5 762 aa18.88■□□□□ 0.61
NDUFS3-213ENST00000534716 GPR34Q9UPC5 381 aa18.88■□□□□ 0.61
NDUFS3-213ENST00000534716 PPIL1Q9Y3C6 166 aa18.88■□□□□ 0.61
NDUFS3-213ENST00000534716 PCDHGC4Q9Y5F7 938 aa18.88■□□□□ 0.61
NDUFS3-213ENST00000534716 GOLGA6L19H0YKK7 550 aa18.87■□□□□ 0.61
NDUFS3-213ENST00000534716 PSMD11O00231 422 aa18.87■□□□□ 0.61
NDUFS3-213ENST00000534716 NFKBIAP25963 317 aa18.87■□□□□ 0.61
NDUFS3-213ENST00000534716 PDX1P52945 283 aa18.87■□□□□ 0.61
NDUFS3-213ENST00000534716 KCTD16Q68DU8 428 aa18.87■□□□□ 0.61
NDUFS3-213ENST00000534716 NYAP1Q6ZVC0 841 aa18.87■□□□□ 0.61
NDUFS3-213ENST00000534716 RD3Q7Z3Z2 195 aa18.87■□□□□ 0.61
NDUFS3-213ENST00000534716 SPACA3Q8IXA5 215 aa18.87■□□□□ 0.61
NDUFS3-213ENST00000534716 GPR156Q8NFN8 814 aa18.87■□□□□ 0.61
NDUFS3-213ENST00000534716 NSMCE1Q8WV22 266 aa18.87■□□□□ 0.61
NDUFS3-213ENST00000534716 CPLX3Q8WVH0 158 aa18.87■□□□□ 0.61
NDUFS3-213ENST00000534716 OR1E3Q8WZA6 343 aa18.87■□□□□ 0.61
NDUFS3-213ENST00000534716 FATE1Q969F0 183 aa18.87■□□□□ 0.61
NDUFS3-213ENST00000534716 SCRN2Q96FV2 425 aa18.87■□□□□ 0.61
NDUFS3-213ENST00000534716 ATXN7L3BQ96GX2 97 aa18.87■□□□□ 0.61
NDUFS3-213ENST00000534716 PRR11Q96HE9 360 aaPredicted RBP18.87■□□□□ 0.61
NDUFS3-213ENST00000534716 SLC46A1Q96NT5 459 aa18.87■□□□□ 0.61
NDUFS3-213ENST00000534716 MCCC1Q96RQ3 725 aaPredicted RBP18.87■□□□□ 0.61
NDUFS3-213ENST00000534716 UBL7Q96S82 380 aaPredicted RBP18.87■□□□□ 0.61
NDUFS3-213ENST00000534716 FGF22Q9HCT0 170 aa18.87■□□□□ 0.61
NDUFS3-213ENST00000534716 THSD1Q9NS62 852 aa18.87■□□□□ 0.61
NDUFS3-213ENST00000534716 RAI2Q9Y5P3 530 aa18.87■□□□□ 0.61
NDUFS3-213ENST00000534716 LRRK1Q38SD2 2015 aa18.86■□□□□ 0.61
NDUFS3-213ENST00000534716 TTC24A2A3L6 582 aaPredicted RBP18.86■□□□□ 0.61
NDUFS3-213ENST00000534716 PDE2AO00408 941 aaPredicted RBP18.86■□□□□ 0.61
NDUFS3-213ENST00000534716 HEXIM1O94992 359 aaKnown RBP18.86■□□□□ 0.61
NDUFS3-213ENST00000534716 CPP00450 1065 aa18.86■□□□□ 0.61
NDUFS3-213ENST00000534716 VIPR1P32241 457 aa18.86■□□□□ 0.61
NDUFS3-213ENST00000534716 MLLT3P42568 568 aaPredicted RBP18.86■□□□□ 0.61
NDUFS3-213ENST00000534716 MMP13P45452 471 aa18.86■□□□□ 0.61
NDUFS3-213ENST00000534716 CCDC173Q0VFZ6 552 aa18.86■□□□□ 0.61
NDUFS3-213ENST00000534716 TRAF2Q12933 501 aa18.86■□□□□ 0.61
NDUFS3-213ENST00000534716 ACOX1Q15067 660 aa18.86■□□□□ 0.61
NDUFS3-213ENST00000534716 CNGA3Q16281 694 aa18.86■□□□□ 0.61
NDUFS3-213ENST00000534716 HADHQ16836 314 aaKnown RBP18.86■□□□□ 0.61
NDUFS3-213ENST00000534716 CCDC122Q5T0U0 273 aa18.86■□□□□ 0.61
NDUFS3-213ENST00000534716 ALG1LQ6GMV1 187 aa18.86■□□□□ 0.61
NDUFS3-213ENST00000534716 CRTC1Q6UUV9 634 aa18.86■□□□□ 0.61
NDUFS3-213ENST00000534716 PAF1Q8N7H5 531 aa18.86■□□□□ 0.61
NDUFS3-213ENST00000534716 LGR4Q9BXB1 951 aa18.86■□□□□ 0.61
NDUFS3-213ENST00000534716 WDR26Q9H7D7 661 aa18.86■□□□□ 0.61
NDUFS3-213ENST00000534716 GULP1Q9UBP9 304 aa18.86■□□□□ 0.61
NDUFS3-213ENST00000534716 APPL1Q9UKG1 709 aa18.86■□□□□ 0.61
NDUFS3-213ENST00000534716 SATB2Q9UPW6 733 aa18.86■□□□□ 0.61
NDUFS3-213ENST00000534716 SSUH2Q9Y2M2 353 aa18.86■□□□□ 0.61
NDUFS3-213ENST00000534716 KALRNO60229 2985 aa18.86■□□□□ 0.61
NDUFS3-213ENST00000534716 A8MX80 341 aa18.85■□□□□ 0.61
NDUFS3-213ENST00000534716 FZD6O60353 706 aa18.85■□□□□ 0.61
NDUFS3-213ENST00000534716 PGLSO95336 258 aa18.85■□□□□ 0.61
NDUFS3-213ENST00000534716 PNLIPP16233 465 aa18.85■□□□□ 0.61
NDUFS3-213ENST00000534716 TEAD1P28347 426 aa18.85■□□□□ 0.61
NDUFS3-213ENST00000534716 SKOR1P84550 965 aa18.85■□□□□ 0.61
NDUFS3-213ENST00000534716 SPIDRQ14159 915 aa18.85■□□□□ 0.61
NDUFS3-213ENST00000534716 DPYSL3Q14195 570 aa18.85■□□□□ 0.61
NDUFS3-213ENST00000534716 KRT81Q14533 505 aa18.85■□□□□ 0.61
NDUFS3-213ENST00000534716 PAFAH1B3Q15102 231 aaKnown RBP18.85■□□□□ 0.61
NDUFS3-213ENST00000534716 NFKBIBQ15653 356 aa18.85■□□□□ 0.61
NDUFS3-213ENST00000534716 TSR1Q2NL82 804 aaKnown RBP18.85■□□□□ 0.61
NDUFS3-213ENST00000534716 PELI3Q8N2H9 469 aa18.85■□□□□ 0.61
NDUFS3-213ENST00000534716 LSM14AQ8ND56 463 aaKnown RBP18.85■□□□□ 0.61
NDUFS3-213ENST00000534716 ZNF564Q8TBZ8 553 aaPredicted RBP18.85■□□□□ 0.61
NDUFS3-213ENST00000534716 MAML1Q92585 1016 aa18.85■□□□□ 0.61
NDUFS3-213ENST00000534716 CCDC74AQ96AQ1 378 aa18.85■□□□□ 0.61
NDUFS3-213ENST00000534716 NUS1Q96E22 293 aa18.85■□□□□ 0.61
NDUFS3-213ENST00000534716 LIN37Q96GY3 246 aaPredicted RBP18.85■□□□□ 0.61
NDUFS3-213ENST00000534716 LGMNQ99538 433 aa18.85■□□□□ 0.61
NDUFS3-213ENST00000534716 TEX101Q9BY14 249 aa18.85■□□□□ 0.61
NDUFS3-213ENST00000534716 DPH1Q9BZG8 443 aa18.85■□□□□ 0.61
NDUFS3-213ENST00000534716 IFNKQ9P0W0 207 aa18.85■□□□□ 0.61
NDUFS3-213ENST00000534716 SIRPGQ9P1W8 387 aa18.85■□□□□ 0.61
NDUFS3-213ENST00000534716 UVRAGQ9P2Y5 699 aa18.85■□□□□ 0.61
NDUFS3-213ENST00000534716 LCMT1Q9UIC8 334 aa18.85■□□□□ 0.61
NDUFS3-213ENST00000534716 RABGEF1Q9UJ41 708 aa18.85■□□□□ 0.61
NDUFS3-213ENST00000534716 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms