RNA–Protein interactions for RNA: ENST00000534705.5

USP48-215, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 566 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-215ENST00000534705 EVPLQ92817 2033 aa3.67□□□□□ -1.82
USP48-215ENST00000534705 A0A0A0MQY5 61 aa3.67□□□□□ -1.82
USP48-215ENST00000534705 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.67□□□□□ -1.82
USP48-215ENST00000534705 FSD2A1L4K1 749 aa3.67□□□□□ -1.82
USP48-215ENST00000534705 CLEC18AA5D8T8 446 aa3.67□□□□□ -1.82
USP48-215ENST00000534705 OR6C68A6NDL8 312 aa3.67□□□□□ -1.82
USP48-215ENST00000534705 OR6C75A6NL08 312 aa3.67□□□□□ -1.82
USP48-215ENST00000534705 PRSS47A8MTI9 375 aa3.67□□□□□ -1.82
USP48-215ENST00000534705 LACTBL1A8MY62 500 aa3.67□□□□□ -1.82
USP48-215ENST00000534705 B9A039 149 aa3.67□□□□□ -1.82
USP48-215ENST00000534705 TCERG1O14776 1098 aaKnown RBP3.67□□□□□ -1.82
USP48-215ENST00000534705 RGS14O43566 566 aa3.67□□□□□ -1.82
USP48-215ENST00000534705 TSPAN3O60637 253 aa3.67□□□□□ -1.82
USP48-215ENST00000534705 CYP1A2P05177 515 aa3.67□□□□□ -1.82
USP48-215ENST00000534705 TPM2P07951 284 aa3.67□□□□□ -1.82
USP48-215ENST00000534705 HSP90AB1P08238 724 aaKnown RBP3.67□□□□□ -1.82
USP48-215ENST00000534705 HOXC6P09630 235 aa3.67□□□□□ -1.82
USP48-215ENST00000534705 CPA1P15085 419 aa3.67□□□□□ -1.82
USP48-215ENST00000534705 HOXD3P31249 432 aaPredicted RBP3.67□□□□□ -1.82
USP48-215ENST00000534705 PRKAR2BP31323 418 aa3.67□□□□□ -1.82
USP48-215ENST00000534705 AVPR1AP37288 418 aa3.67□□□□□ -1.82
USP48-215ENST00000534705 MLH1P40692 756 aa3.67□□□□□ -1.82
USP48-215ENST00000534705 GPR12P47775 334 aa3.67□□□□□ -1.82
USP48-215ENST00000534705 Q0VFX4 171 aa3.67□□□□□ -1.82
USP48-215ENST00000534705 SLC39A6Q13433 755 aa3.67□□□□□ -1.82
USP48-215ENST00000534705 C1orf141Q5JVX7 400 aa3.67□□□□□ -1.82
USP48-215ENST00000534705 C8orf82Q6P1X6 216 aaPredicted RBP3.67□□□□□ -1.82
USP48-215ENST00000534705 Q6ZTK2 550 aa3.67□□□□□ -1.82
USP48-215ENST00000534705 CTU1Q7Z7A3 348 aaKnown RBP3.67□□□□□ -1.82
USP48-215ENST00000534705 ZNF354CQ86Y25 554 aa3.67□□□□□ -1.82
USP48-215ENST00000534705 C2CD5Q86YS7 1000 aa3.67□□□□□ -1.82
USP48-215ENST00000534705 FBXL14Q8N1E6 418 aa3.67□□□□□ -1.82
USP48-215ENST00000534705 PDILTQ8N807 584 aa3.67□□□□□ -1.82
USP48-215ENST00000534705 CLEC18CQ8NCF0 446 aa3.67□□□□□ -1.82
USP48-215ENST00000534705 LINS1Q8NG48 757 aa3.67□□□□□ -1.82
USP48-215ENST00000534705 CEP70Q8NHQ1 597 aa3.67□□□□□ -1.82
USP48-215ENST00000534705 SLC35F5Q8WV83 523 aa3.67□□□□□ -1.82
USP48-215ENST00000534705 NR4A3Q92570 626 aa3.67□□□□□ -1.82
USP48-215ENST00000534705 TBC1D20Q96BZ9 403 aa3.67□□□□□ -1.82
USP48-215ENST00000534705 PHF21BQ96EK2 531 aa3.67□□□□□ -1.82
USP48-215ENST00000534705 RBM17Q96I25 401 aaKnown RBP3.67□□□□□ -1.82
USP48-215ENST00000534705 ZNF479Q96JC4 524 aa3.67□□□□□ -1.82
USP48-215ENST00000534705 ACAD9Q9H845 621 aa3.67□□□□□ -1.82
USP48-215ENST00000534705 PRKRIP1Q9H875 184 aaPredicted RBP3.67□□□□□ -1.82
USP48-215ENST00000534705 IL36RNQ9UBH0 155 aa3.67□□□□□ -1.82
USP48-215ENST00000534705 NAP1L2Q9ULW6 460 aaPredicted RBP3.67□□□□□ -1.82
USP48-215ENST00000534705 SUFUQ9UMX1 484 aa3.67□□□□□ -1.82
USP48-215ENST00000534705 GDAQ9Y2T3 454 aa3.67□□□□□ -1.82
USP48-215ENST00000534705 PCDHGB3Q9Y5G1 929 aa3.67□□□□□ -1.82
USP48-215ENST00000534705 RPS6KL1Q9Y6S9 549 aa3.67□□□□□ -1.82
USP48-215ENST00000534705 MORC2Q9Y6X9 1032 aaPredicted RBP3.67□□□□□ -1.82
USP48-215ENST00000534705 ZBED9Q6R2W3 1325 aa3.67□□□□□ -1.82
USP48-215ENST00000534705 A0A096LPK6 155 aa3.66□□□□□ -1.82
USP48-215ENST00000534705 C4orf47A7E2U8 309 aa3.66□□□□□ -1.82
USP48-215ENST00000534705 STMND1H3BQB6 276 aa3.66□□□□□ -1.82
USP48-215ENST00000534705 STX16-NPEPL1H3BU86 382 aa3.66□□□□□ -1.82
USP48-215ENST00000534705 VWA5AO00534 786 aa3.66□□□□□ -1.82
USP48-215ENST00000534705 STX16O14662 325 aa3.66□□□□□ -1.82
USP48-215ENST00000534705 DHX16O60231 1041 aaKnown RBP3.66□□□□□ -1.82
USP48-215ENST00000534705 ZNF500O60304 480 aaPredicted RBP3.66□□□□□ -1.82
USP48-215ENST00000534705 SOX30O94993 753 aa3.66□□□□□ -1.82
USP48-215ENST00000534705 GAS8-AS1O95177 125 aa3.66□□□□□ -1.82
USP48-215ENST00000534705 CLDN7O95471 211 aa3.66□□□□□ -1.82
USP48-215ENST00000534705 NGFRP08138 427 aa3.66□□□□□ -1.82
USP48-215ENST00000534705 DPP6P42658 865 aa3.66□□□□□ -1.82
USP48-215ENST00000534705 ZXDBP98169 803 aa3.66□□□□□ -1.82
USP48-215ENST00000534705 GPS2Q13227 327 aa3.66□□□□□ -1.82
USP48-215ENST00000534705 IL13RA2Q14627 380 aa3.66□□□□□ -1.82
USP48-215ENST00000534705 CCDC184Q52MB2 194 aa3.66□□□□□ -1.82
USP48-215ENST00000534705 PATL1Q86TB9 770 aaKnown RBP3.66□□□□□ -1.82
USP48-215ENST00000534705 TRIM74Q86UV6 250 aa3.66□□□□□ -1.82
USP48-215ENST00000534705 TRIM73Q86UV7 250 aa3.66□□□□□ -1.82
USP48-215ENST00000534705 FAM9BQ8IZU0 186 aa3.66□□□□□ -1.82
USP48-215ENST00000534705 IQCF1Q8N6M8 205 aa3.66□□□□□ -1.82
USP48-215ENST00000534705 HORMAD2Q8N7B1 307 aa3.66□□□□□ -1.82
USP48-215ENST00000534705 TEX45Q8NA69 505 aa3.66□□□□□ -1.82
USP48-215ENST00000534705 SETD9Q8NE22 299 aa3.66□□□□□ -1.82
USP48-215ENST00000534705 ZMIZ2Q8NF64 920 aa3.66□□□□□ -1.82
USP48-215ENST00000534705 ELP5Q8TE02 316 aa3.66□□□□□ -1.82
USP48-215ENST00000534705 OIT3Q8WWZ8 545 aa3.66□□□□□ -1.82
USP48-215ENST00000534705 RNFT2Q96EX2 444 aa3.66□□□□□ -1.82
USP48-215ENST00000534705 CFAP53Q96M91 514 aa3.66□□□□□ -1.82
USP48-215ENST00000534705 TWNKQ96RR1 684 aa3.66□□□□□ -1.82
USP48-215ENST00000534705 MAP7D2Q96T17 732 aa3.66□□□□□ -1.82
USP48-215ENST00000534705 MEIS3Q99687 375 aa3.66□□□□□ -1.82
USP48-215ENST00000534705 PYM1Q9BRP8 204 aaKnown RBP3.66□□□□□ -1.82
USP48-215ENST00000534705 NTPCRQ9BSD7 190 aaKnown RBP3.66□□□□□ -1.82
USP48-215ENST00000534705 TTC12Q9H892 705 aaPredicted RBP3.66□□□□□ -1.82
USP48-215ENST00000534705 RMI1Q9H9A7 625 aa3.66□□□□□ -1.82
USP48-215ENST00000534705 ATP8A2Q9NTI2 1148 aa3.66□□□□□ -1.82
USP48-215ENST00000534705 HDAC6Q9UBN7 1215 aa3.66□□□□□ -1.82
USP48-215ENST00000534705 MYO6Q9UM54 1294 aa3.66□□□□□ -1.82
USP48-215ENST00000534705 SRPRBQ9Y5M8 271 aaKnown RBP3.66□□□□□ -1.82
USP48-215ENST00000534705 LRRC37AA6NMS7 1700 aa3.66□□□□□ -1.82
USP48-215ENST00000534705 C10orf71Q711Q0 1435 aa3.65□□□□□ -1.83
USP48-215ENST00000534705 BECN2A8MW95 431 aa3.65□□□□□ -1.83
USP48-215ENST00000534705 HSPB6O14558 160 aa3.65□□□□□ -1.83
USP48-215ENST00000534705 TIMM44O43615 452 aa3.65□□□□□ -1.83
USP48-215ENST00000534705 RXRAP19793 462 aa3.65□□□□□ -1.83
USP48-215ENST00000534705 HNF1BP35680 557 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms