RNA–Protein interactions for RNA: ENST00000533909.5

CAPN1-227, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-227ENST00000533909 IGFALSP35858 605 aa13.42□□□□□ -0.26
CAPN1-227ENST00000533909 RPL26P61254 145 aaKnown RBP13.42□□□□□ -0.26
CAPN1-227ENST00000533909 HNRNPKP61978 463 aaKnown RBP eCLIP13.42□□□□□ -0.26
CAPN1-227ENST00000533909 NIPAL4Q0D2K0 466 aa13.42□□□□□ -0.26
CAPN1-227ENST00000533909 RALGDSQ12967 914 aa13.42□□□□□ -0.26
CAPN1-227ENST00000533909 INPP5AQ14642 412 aa13.42□□□□□ -0.26
CAPN1-227ENST00000533909 PRKD1Q15139 912 aaPredicted RBP13.42□□□□□ -0.26
CAPN1-227ENST00000533909 WSCD2Q2TBF2 565 aa13.42□□□□□ -0.26
CAPN1-227ENST00000533909 CCDC157Q569K6 752 aa13.42□□□□□ -0.26
CAPN1-227ENST00000533909 ZNF542PQ5EBM4 170 aa13.42□□□□□ -0.26
CAPN1-227ENST00000533909 LIPIQ6XZB0 460 aa13.42□□□□□ -0.26
CAPN1-227ENST00000533909 CDKL3Q8IVW4 592 aaPredicted RBP13.42□□□□□ -0.26
CAPN1-227ENST00000533909 SLC22A18ASQ8N1D0 253 aa13.42□□□□□ -0.26
CAPN1-227ENST00000533909 EID2Q8N6I1 236 aa13.42□□□□□ -0.26
CAPN1-227ENST00000533909 TP53I13Q8NBR0 393 aaPredicted RBP13.42□□□□□ -0.26
CAPN1-227ENST00000533909 ARRDC2Q8TBH0 407 aa13.42□□□□□ -0.26
CAPN1-227ENST00000533909 SAP25Q8TEE9 199 aa13.42□□□□□ -0.26
CAPN1-227ENST00000533909 HTR3CQ8WXA8 447 aa13.42□□□□□ -0.26
CAPN1-227ENST00000533909 ALG3Q92685 438 aa13.42□□□□□ -0.26
CAPN1-227ENST00000533909 NUS1Q96E22 293 aa13.42□□□□□ -0.26
CAPN1-227ENST00000533909 QKIQ96PU8 341 aaKnown RBP eCLIP13.42□□□□□ -0.26
CAPN1-227ENST00000533909 RBM15Q96T37 977 aaKnown RBP eCLIP13.42□□□□□ -0.26
CAPN1-227ENST00000533909 TDRD1Q9BXT4 1180 aaKnown RBP13.42□□□□□ -0.26
CAPN1-227ENST00000533909 SLC13A1Q9BZW2 595 aa13.42□□□□□ -0.26
CAPN1-227ENST00000533909 SLC25A51Q9H1U9 297 aa13.42□□□□□ -0.26
CAPN1-227ENST00000533909 LZTFL1Q9NQ48 299 aa13.42□□□□□ -0.26
CAPN1-227ENST00000533909 MBNL1Q9NR56 388 aaKnown RBP13.42□□□□□ -0.26
CAPN1-227ENST00000533909 PACSIN2Q9UNF0 486 aaPredicted RBP13.42□□□□□ -0.26
CAPN1-227ENST00000533909 RPL26L1Q9UNX3 145 aaKnown RBP13.42□□□□□ -0.26
CAPN1-227ENST00000533909 APOBEC2Q9Y235 224 aaKnown RBP13.42□□□□□ -0.26
CAPN1-227ENST00000533909 BTBD3Q9Y2F9 522 aa13.42□□□□□ -0.26
CAPN1-227ENST00000533909 EFR3BQ9Y2G0 817 aa13.42□□□□□ -0.26
CAPN1-227ENST00000533909 TP53BP1Q12888 1972 aaPredicted RBP13.41□□□□□ -0.26
CAPN1-227ENST00000533909 A0A0J9YYE9 177 aa13.41□□□□□ -0.26
CAPN1-227ENST00000533909 A0A0U1RQJ8 604 aa13.41□□□□□ -0.26
CAPN1-227ENST00000533909 NEMP2A6NFY4 417 aa13.41□□□□□ -0.26
CAPN1-227ENST00000533909 CACNB4O00305 520 aaPredicted RBP13.41□□□□□ -0.26
CAPN1-227ENST00000533909 ZNF189O75820 626 aaPredicted RBP13.41□□□□□ -0.26
CAPN1-227ENST00000533909 HEXIM1O94992 359 aaKnown RBP13.41□□□□□ -0.26
CAPN1-227ENST00000533909 TRBC1P01850 177 aa13.41□□□□□ -0.26
CAPN1-227ENST00000533909 PDHA1P08559 390 aa13.41□□□□□ -0.26
CAPN1-227ENST00000533909 PYGMP11217 842 aa13.41□□□□□ -0.26
CAPN1-227ENST00000533909 PTPN3P26045 913 aa13.41□□□□□ -0.26
CAPN1-227ENST00000533909 HNF1BP35680 557 aa13.41□□□□□ -0.26
CAPN1-227ENST00000533909 PEX5P50542 639 aa13.41□□□□□ -0.26
CAPN1-227ENST00000533909 EIF3EP60228 445 aaKnown RBP13.41□□□□□ -0.26
CAPN1-227ENST00000533909 PFN3P60673 137 aa13.41□□□□□ -0.26
CAPN1-227ENST00000533909 OTUD4Q01804 1114 aaKnown RBP13.41□□□□□ -0.26
CAPN1-227ENST00000533909 ADCY2Q08462 1091 aa13.41□□□□□ -0.26
CAPN1-227ENST00000533909 FOXC1Q12948 553 aa13.41□□□□□ -0.26
CAPN1-227ENST00000533909 BNIP3Q12983 259 aa13.41□□□□□ -0.26
CAPN1-227ENST00000533909 ZNF211Q13398 564 aaPredicted RBP13.41□□□□□ -0.26
CAPN1-227ENST00000533909 XRCC4Q13426 336 aa13.41□□□□□ -0.26
CAPN1-227ENST00000533909 MTM1Q13496 603 aa13.41□□□□□ -0.26
CAPN1-227ENST00000533909 FZD2Q14332 565 aa13.41□□□□□ -0.26
CAPN1-227ENST00000533909 AGERQ15109 404 aa13.41□□□□□ -0.26
CAPN1-227ENST00000533909 CNGA3Q16281 694 aa13.41□□□□□ -0.26
CAPN1-227ENST00000533909 PCSK7Q16549 785 aa13.41□□□□□ -0.26
CAPN1-227ENST00000533909 TEX44Q53QW1 395 aa13.41□□□□□ -0.26
CAPN1-227ENST00000533909 DARS2Q6PI48 645 aaKnown RBP13.41□□□□□ -0.26
CAPN1-227ENST00000533909 KDELC2Q7Z4H8 507 aa13.41□□□□□ -0.26
CAPN1-227ENST00000533909 CNTD1Q8N815 330 aa13.41□□□□□ -0.26
CAPN1-227ENST00000533909 ACTL9Q8TC94 416 aa13.41□□□□□ -0.26
CAPN1-227ENST00000533909 BTN2A2Q8WVV5 523 aa13.41□□□□□ -0.26
CAPN1-227ENST00000533909 PIH1D2Q8WWB5 315 aa13.41□□□□□ -0.26
CAPN1-227ENST00000533909 MCCC1Q96RQ3 725 aaPredicted RBP13.41□□□□□ -0.26
CAPN1-227ENST00000533909 VAT1Q99536 393 aa13.41□□□□□ -0.26
CAPN1-227ENST00000533909 GLOD4Q9HC38 313 aa13.41□□□□□ -0.26
CAPN1-227ENST00000533909 OR1A2Q9Y585 309 aa13.41□□□□□ -0.26
CAPN1-227ENST00000533909 CAPN6Q9Y6Q1 641 aa13.41□□□□□ -0.26
CAPN1-227ENST00000533909 PCNX2A6NKB5 2137 aa13.4□□□□□ -0.26
CAPN1-227ENST00000533909 CAPN8A6NHC0 703 aa13.4□□□□□ -0.26
CAPN1-227ENST00000533909 NPIPB15A6NHN6 443 aaPredicted RBP13.4□□□□□ -0.26
CAPN1-227ENST00000533909 PSMD11O00231 422 aa13.4□□□□□ -0.26
CAPN1-227ENST00000533909 PDE2AO00408 941 aaPredicted RBP13.4□□□□□ -0.26
CAPN1-227ENST00000533909 FFAR2O15552 330 aa13.4□□□□□ -0.26
CAPN1-227ENST00000533909 TNFSF14O43557 240 aa13.4□□□□□ -0.26
CAPN1-227ENST00000533909 LDOC1O95751 146 aaPredicted RBP13.4□□□□□ -0.26
CAPN1-227ENST00000533909 CSF2P04141 144 aa13.4□□□□□ -0.26
CAPN1-227ENST00000533909 ZNF30P17039 623 aa13.4□□□□□ -0.26
CAPN1-227ENST00000533909 JUNDP17535 347 aa13.4□□□□□ -0.26
CAPN1-227ENST00000533909 KELP23276 732 aa13.4□□□□□ -0.26
CAPN1-227ENST00000533909 ETV3P41162 512 aa13.4□□□□□ -0.26
CAPN1-227ENST00000533909 BLKP51451 505 aa13.4□□□□□ -0.26
CAPN1-227ENST00000533909 SKOR1P84550 965 aa13.4□□□□□ -0.26
CAPN1-227ENST00000533909 NOMO1Q15155 1222 aa13.4□□□□□ -0.26
CAPN1-227ENST00000533909 SHBQ15464 509 aa13.4□□□□□ -0.26
CAPN1-227ENST00000533909 SEL1L2Q5TEA6 688 aa13.4□□□□□ -0.26
CAPN1-227ENST00000533909 FAXCQ5TGI0 409 aa13.4□□□□□ -0.26
CAPN1-227ENST00000533909 LRRC66Q68CR7 880 aa13.4□□□□□ -0.26
CAPN1-227ENST00000533909 KDM7AQ6ZMT4 941 aa13.4□□□□□ -0.26
CAPN1-227ENST00000533909 MACC1Q6ZN28 852 aa13.4□□□□□ -0.26
CAPN1-227ENST00000533909 DBX2Q6ZNG2 339 aa13.4□□□□□ -0.26
CAPN1-227ENST00000533909 PID1Q7Z2X4 250 aa13.4□□□□□ -0.26
CAPN1-227ENST00000533909 TTC13Q8NBP0 860 aa13.4□□□□□ -0.26
CAPN1-227ENST00000533909 CCHCR1Q8TD31 782 aa13.4□□□□□ -0.26
CAPN1-227ENST00000533909 UBE2Q2Q8WVN8 375 aa13.4□□□□□ -0.26
CAPN1-227ENST00000533909 IMP4Q96G21 291 aaKnown RBP13.4□□□□□ -0.26
CAPN1-227ENST00000533909 CNDP2Q96KP4 475 aaKnown RBP13.4□□□□□ -0.26
CAPN1-227ENST00000533909 TEKT5Q96M29 485 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms