RNA–Protein interactions for RNA: ENST00000533897.1

CTSC-208, Transcript of cathepsin C, humanhuman

TSL 2

Gene CTSC, Length 4,344 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-208ENST00000533897 PRPF18Q99633 342 aaKnown RBP4.44□□□□□ -1.7
CTSC-208ENST00000533897 PNPLA3Q9NST1 481 aa4.44□□□□□ -1.7
CTSC-208ENST00000533897 SLC38A7Q9NVC3 462 aa4.44□□□□□ -1.7
CTSC-208ENST00000533897 TMEM45AQ9NWC5 275 aa4.44□□□□□ -1.7
CTSC-208ENST00000533897 DNMT3BQ9UBC3 853 aaKnown RBP4.44□□□□□ -1.7
CTSC-208ENST00000533897 RSL24D1Q9UHA3 163 aaKnown RBP4.44□□□□□ -1.7
CTSC-208ENST00000533897 SFMBT1Q9UHJ3 866 aa4.44□□□□□ -1.7
CTSC-208ENST00000533897 APPL1Q9UKG1 709 aa4.44□□□□□ -1.7
CTSC-208ENST00000533897 ACOT9Q9Y305 439 aa4.44□□□□□ -1.7
CTSC-208ENST00000533897 KIAA1549LQ6ZVL6 1849 aa4.43□□□□□ -1.7
CTSC-208ENST00000533897 RRN3P2A6NIE6 340 aa4.43□□□□□ -1.7
CTSC-208ENST00000533897 BBIP1A8MTZ0 92 aa4.43□□□□□ -1.7
CTSC-208ENST00000533897 H3BMM5 538 aa4.43□□□□□ -1.7
CTSC-208ENST00000533897 IRAK2O43187 625 aa4.43□□□□□ -1.7
CTSC-208ENST00000533897 HNRNPRO43390 633 aaKnown RBP4.43□□□□□ -1.7
CTSC-208ENST00000533897 CREB3O43889 395 aa4.43□□□□□ -1.7
CTSC-208ENST00000533897 TSPAN12O95859 305 aa4.43□□□□□ -1.7
CTSC-208ENST00000533897 CYP2C18P33260 490 aa4.43□□□□□ -1.7
CTSC-208ENST00000533897 SERPINB6P35237 376 aa4.43□□□□□ -1.7
CTSC-208ENST00000533897 MAP3K7CLP57077 242 aa4.43□□□□□ -1.7
CTSC-208ENST00000533897 RCAN2Q14206 197 aa4.43□□□□□ -1.7
CTSC-208ENST00000533897 SMAD1Q15797 465 aaKnown RBP4.43□□□□□ -1.7
CTSC-208ENST00000533897 C5orf22Q49AR2 442 aa4.43□□□□□ -1.7
CTSC-208ENST00000533897 RASIP1Q5U651 963 aa4.43□□□□□ -1.7
CTSC-208ENST00000533897 ITPRIPL1Q6GPH6 555 aa4.43□□□□□ -1.7
CTSC-208ENST00000533897 CASC4Q6P4E1 433 aa4.43□□□□□ -1.7
CTSC-208ENST00000533897 LRRTM3Q86VH5 581 aa4.43□□□□□ -1.7
CTSC-208ENST00000533897 CMTR2Q8IYT2 770 aaKnown RBP4.43□□□□□ -1.7
CTSC-208ENST00000533897 ANKRD13AQ8IZ07 590 aa4.43□□□□□ -1.7
CTSC-208ENST00000533897 UMODL1-AS1Q8N2C9 162 aa4.43□□□□□ -1.7
CTSC-208ENST00000533897 SPATA6LQ8N4H0 392 aa4.43□□□□□ -1.7
CTSC-208ENST00000533897 TSPAN14Q8NG11 270 aa4.43□□□□□ -1.7
CTSC-208ENST00000533897 OR9I1Q8NGQ6 314 aa4.43□□□□□ -1.7
CTSC-208ENST00000533897 TBC1D15Q8TC07 691 aa4.43□□□□□ -1.7
CTSC-208ENST00000533897 LZICQ8WZA0 190 aa4.43□□□□□ -1.7
CTSC-208ENST00000533897 SGF29Q96ES7 293 aa4.43□□□□□ -1.7
CTSC-208ENST00000533897 FAR2Q96K12 515 aa4.43□□□□□ -1.7
CTSC-208ENST00000533897 OSMRQ99650 979 aa4.43□□□□□ -1.7
CTSC-208ENST00000533897 TDRD1Q9BXT4 1180 aaKnown RBP4.43□□□□□ -1.7
CTSC-208ENST00000533897 MFSD1Q9H3U5 465 aa4.43□□□□□ -1.7
CTSC-208ENST00000533897 RPF2Q9H7B2 306 aaKnown RBP4.43□□□□□ -1.7
CTSC-208ENST00000533897 MRGBPQ9NV56 204 aa4.43□□□□□ -1.7
CTSC-208ENST00000533897 FAIMQ9NVQ4 179 aa4.43□□□□□ -1.7
CTSC-208ENST00000533897 DNAAF2Q9NVR5 837 aaKnown RBP4.43□□□□□ -1.7
CTSC-208ENST00000533897 TBCCD1Q9NVR7 557 aa4.43□□□□□ -1.7
CTSC-208ENST00000533897 FLRT1Q9NZU1 646 aa4.43□□□□□ -1.7
CTSC-208ENST00000533897 KIAA1522Q9P206 1035 aaPredicted RBP4.43□□□□□ -1.7
CTSC-208ENST00000533897 CACNG4Q9UBN1 327 aa4.43□□□□□ -1.7
CTSC-208ENST00000533897 EBF1Q9UH73 591 aa4.43□□□□□ -1.7
CTSC-208ENST00000533897 RIMKLBQ9ULI2 386 aa4.43□□□□□ -1.7
CTSC-208ENST00000533897 STAP1Q9ULZ2 295 aa4.43□□□□□ -1.7
CTSC-208ENST00000533897 CCL27Q9Y4X3 112 aa4.43□□□□□ -1.7
CTSC-208ENST00000533897 AK5Q9Y6K8 562 aa4.43□□□□□ -1.7
CTSC-208ENST00000533897 PLXNA2O75051 1894 aa4.43□□□□□ -1.7
CTSC-208ENST00000533897 PPP6CO00743 305 aa4.43□□□□□ -1.7
CTSC-208ENST00000533897 NEMP1O14524 444 aa4.43□□□□□ -1.7
CTSC-208ENST00000533897 CDK14O94921 469 aa4.43□□□□□ -1.7
CTSC-208ENST00000533897 ATE1O95260 518 aa4.43□□□□□ -1.7
CTSC-208ENST00000533897 USP17L7P0C7H9 530 aa4.43□□□□□ -1.7
CTSC-208ENST00000533897 IMPDH2P12268 514 aa4.43□□□□□ -1.7
CTSC-208ENST00000533897 HNRNPLP14866 589 aaKnown RBP eCLIP4.43□□□□□ -1.7
CTSC-208ENST00000533897 CPB1P15086 417 aa4.43□□□□□ -1.7
CTSC-208ENST00000533897 CD247P20963 164 aa4.43□□□□□ -1.7
CTSC-208ENST00000533897 CD9P21926 228 aa4.43□□□□□ -1.7
CTSC-208ENST00000533897 AVPR1AP37288 418 aa4.43□□□□□ -1.7
CTSC-208ENST00000533897 APLP1P51693 650 aa4.43□□□□□ -1.7
CTSC-208ENST00000533897 MLLT10P55197 1068 aa4.43□□□□□ -1.7
CTSC-208ENST00000533897 TPI1P60174 286 aa4.43□□□□□ -1.7
CTSC-208ENST00000533897 HERVK_113P63132 956 aa4.43□□□□□ -1.7
CTSC-208ENST00000533897 RALGDSQ12967 914 aa4.43□□□□□ -1.7
CTSC-208ENST00000533897 OR4D1Q15615 310 aa4.43□□□□□ -1.7
CTSC-208ENST00000533897 GRAMD1BQ3KR37 738 aa4.43□□□□□ -1.7
CTSC-208ENST00000533897 ZBED5Q49AG3 693 aa4.43□□□□□ -1.7
CTSC-208ENST00000533897 BLOC1S3Q6QNY0 202 aa4.43□□□□□ -1.7
CTSC-208ENST00000533897 RNF165Q6ZSG1 346 aa4.43□□□□□ -1.7
CTSC-208ENST00000533897 TMEM86AQ8N2M4 240 aa4.43□□□□□ -1.7
CTSC-208ENST00000533897 RNF148Q8N7C7 305 aa4.43□□□□□ -1.7
CTSC-208ENST00000533897 HIPK4Q8NE63 616 aa4.43□□□□□ -1.7
CTSC-208ENST00000533897 OR2T34Q8NGX1 318 aa4.43□□□□□ -1.7
CTSC-208ENST00000533897 OR2T3Q8NH03 318 aa4.43□□□□□ -1.7
CTSC-208ENST00000533897 RHEBL1Q8TAI7 183 aa4.43□□□□□ -1.7
CTSC-208ENST00000533897 DQX1Q8TE96 717 aaKnown RBP4.43□□□□□ -1.7
CTSC-208ENST00000533897 TSPEARQ8WU66 669 aa4.43□□□□□ -1.7
CTSC-208ENST00000533897 PEX13Q92968 403 aa4.43□□□□□ -1.7
CTSC-208ENST00000533897 OTUD5Q96G74 571 aa4.43□□□□□ -1.7
CTSC-208ENST00000533897 CSF3RQ99062 836 aa4.43□□□□□ -1.7
CTSC-208ENST00000533897 MPHOSPH6Q99547 160 aaKnown RBP4.43□□□□□ -1.7
CTSC-208ENST00000533897 APOL2Q9BQE5 337 aa4.43□□□□□ -1.7
CTSC-208ENST00000533897 PAAF1Q9BRP4 392 aa4.43□□□□□ -1.7
CTSC-208ENST00000533897 TRMOQ9BU70 441 aa4.43□□□□□ -1.7
CTSC-208ENST00000533897 ERVK-6Q9BXR3 956 aa4.43□□□□□ -1.7
CTSC-208ENST00000533897 SEZ6LQ9BYH1 1024 aa4.43□□□□□ -1.7
CTSC-208ENST00000533897 TKTL2Q9H0I9 626 aa4.43□□□□□ -1.7
CTSC-208ENST00000533897 ACTL8Q9H568 366 aa4.43□□□□□ -1.7
CTSC-208ENST00000533897 GALNT8Q9NY28 637 aa4.43□□□□□ -1.7
CTSC-208ENST00000533897 NCKIPSDQ9NZQ3 722 aa4.43□□□□□ -1.7
CTSC-208ENST00000533897 MARCH4Q9P2E8 410 aaPredicted RBP4.43□□□□□ -1.7
CTSC-208ENST00000533897 KLHL8Q9P2G9 620 aaPredicted RBP4.43□□□□□ -1.7
CTSC-208ENST00000533897 SLC8A2Q9UPR5 921 aa4.43□□□□□ -1.7
CTSC-208ENST00000533897 AAR2Q9Y312 384 aaKnown RBP4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms