RNA–Protein interactions for RNA: ENST00000533657.5

CAPRIN1-215, Transcript of cell cycle associated protein 1, humanhuman

TSL 2

Gene CAPRIN1, Length 2,774 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-215ENST00000533657 FAM131CQ96AQ9 280 aa10.35□□□□□ -0.75
CAPRIN1-215ENST00000533657 SEMA3CQ99985 751 aa10.35□□□□□ -0.75
CAPRIN1-215ENST00000533657 TDRD1Q9BXT4 1180 aaKnown RBP10.35□□□□□ -0.75
CAPRIN1-215ENST00000533657 CIPCQ9C0C6 399 aa10.35□□□□□ -0.75
CAPRIN1-215ENST00000533657 FCF1Q9Y324 198 aaKnown RBP10.35□□□□□ -0.75
CAPRIN1-215ENST00000533657 SZT2Q5T011 3432 aa10.35□□□□□ -0.75
CAPRIN1-215ENST00000533657 TRAFD1O14545 582 aaPredicted RBP10.35□□□□□ -0.75
CAPRIN1-215ENST00000533657 SUPT3HO75486 399 aa10.35□□□□□ -0.75
CAPRIN1-215ENST00000533657 GNAZP19086 355 aa10.35□□□□□ -0.75
CAPRIN1-215ENST00000533657 HLA-DPA1P20036 260 aa10.35□□□□□ -0.75
CAPRIN1-215ENST00000533657 PSMA3P25788 255 aa10.35□□□□□ -0.75
CAPRIN1-215ENST00000533657 ITGA8P53708 1063 aa10.35□□□□□ -0.75
CAPRIN1-215ENST00000533657 NRLP54845 237 aa10.35□□□□□ -0.75
CAPRIN1-215ENST00000533657 PON2Q15165 354 aa10.35□□□□□ -0.75
CAPRIN1-215ENST00000533657 TJAP1Q5JTD0 557 aa10.35□□□□□ -0.75
CAPRIN1-215ENST00000533657 SPDYCQ5MJ68 293 aa10.35□□□□□ -0.75
CAPRIN1-215ENST00000533657 RANBP10Q6VN20 620 aa10.35□□□□□ -0.75
CAPRIN1-215ENST00000533657 ZNF534Q76KX8 674 aa10.35□□□□□ -0.75
CAPRIN1-215ENST00000533657 ZNF554Q86TJ5 538 aa10.35□□□□□ -0.75
CAPRIN1-215ENST00000533657 RAVER1Q8IY67 606 aaKnown RBP10.35□□□□□ -0.75
CAPRIN1-215ENST00000533657 ST13P5Q8NFI4 369 aaPredicted RBP10.35□□□□□ -0.75
CAPRIN1-215ENST00000533657 DNAJC9Q8WXX5 260 aa10.35□□□□□ -0.75
CAPRIN1-215ENST00000533657 LRRC39Q96DD0 335 aa10.35□□□□□ -0.75
CAPRIN1-215ENST00000533657 MRGPRX2Q96LB1 330 aa10.35□□□□□ -0.75
CAPRIN1-215ENST00000533657 RANBP9Q96S59 729 aa10.35□□□□□ -0.75
CAPRIN1-215ENST00000533657 ATP13A3Q9H7F0 1226 aa10.35□□□□□ -0.75
CAPRIN1-215ENST00000533657 FBRSL1Q9HCM7 1045 aaKnown RBP10.35□□□□□ -0.75
CAPRIN1-215ENST00000533657 PDP2Q9P2J9 529 aa10.35□□□□□ -0.75
CAPRIN1-215ENST00000533657 ANAPC5Q9UJX4 755 aa10.35□□□□□ -0.75
CAPRIN1-215ENST00000533657 NFU1Q9UMS0 254 aa10.35□□□□□ -0.75
CAPRIN1-215ENST00000533657 SNX24Q9Y343 169 aa10.35□□□□□ -0.75
CAPRIN1-215ENST00000533657 TMED5Q9Y3A6 229 aa10.35□□□□□ -0.75
CAPRIN1-215ENST00000533657 MYLKQ15746 1914 aa10.35□□□□□ -0.75
CAPRIN1-215ENST00000533657 K7ERQ8 282 aa10.34□□□□□ -0.75
CAPRIN1-215ENST00000533657 EGFP01133 1207 aa10.34□□□□□ -0.75
CAPRIN1-215ENST00000533657 TSHRP16473 764 aa10.34□□□□□ -0.75
CAPRIN1-215ENST00000533657 CALB2P22676 271 aa10.34□□□□□ -0.75
CAPRIN1-215ENST00000533657 SERPINB4P48594 390 aa10.34□□□□□ -0.75
CAPRIN1-215ENST00000533657 NCALDP61601 193 aa10.34□□□□□ -0.75
CAPRIN1-215ENST00000533657 DSC2Q02487 901 aa10.34□□□□□ -0.75
CAPRIN1-215ENST00000533657 RAD51Q06609 339 aa10.34□□□□□ -0.75
CAPRIN1-215ENST00000533657 ELAVL3Q14576 367 aaKnown RBP10.34□□□□□ -0.75
CAPRIN1-215ENST00000533657 FNDC3BQ53EP0 1204 aaKnown RBP10.34□□□□□ -0.75
CAPRIN1-215ENST00000533657 C9orf64Q5T6V5 341 aa10.34□□□□□ -0.75
CAPRIN1-215ENST00000533657 EGFLAMQ63HQ2 1017 aa10.34□□□□□ -0.75
CAPRIN1-215ENST00000533657 MAMSTRQ6ZN01 415 aa10.34□□□□□ -0.75
CAPRIN1-215ENST00000533657 GJD3Q8N144 294 aa10.34□□□□□ -0.75
CAPRIN1-215ENST00000533657 CYB5D2Q8WUJ1 264 aa10.34□□□□□ -0.75
CAPRIN1-215ENST00000533657 PTCD2Q8WV60 388 aaKnown RBP10.34□□□□□ -0.75
CAPRIN1-215ENST00000533657 IFT81Q8WYA0 676 aa10.34□□□□□ -0.75
CAPRIN1-215ENST00000533657 RAB3IPQ96QF0 476 aaPredicted RBP10.34□□□□□ -0.75
CAPRIN1-215ENST00000533657 TBL1YQ9BQ87 522 aa10.34□□□□□ -0.75
CAPRIN1-215ENST00000533657 HEPHQ9BQS7 1158 aa10.34□□□□□ -0.75
CAPRIN1-215ENST00000533657 MRM3Q9HC36 420 aaKnown RBP10.34□□□□□ -0.75
CAPRIN1-215ENST00000533657 RIMKLBQ9ULI2 386 aa10.34□□□□□ -0.75
CAPRIN1-215ENST00000533657 ACTL7AQ9Y615 435 aa10.34□□□□□ -0.75
CAPRIN1-215ENST00000533657 COMMD3-BMI1R4GMX3 469 aa10.34□□□□□ -0.75
CAPRIN1-215ENST00000533657 PLXND1Q9Y4D7 1925 aa10.34□□□□□ -0.75
CAPRIN1-215ENST00000533657 HNRNPRO43390 633 aaKnown RBP10.34□□□□□ -0.75
CAPRIN1-215ENST00000533657 TMEM63AO94886 807 aa10.34□□□□□ -0.75
CAPRIN1-215ENST00000533657 FGF1P05230 155 aa10.34□□□□□ -0.75
CAPRIN1-215ENST00000533657 NTSR1P30989 418 aa10.34□□□□□ -0.75
CAPRIN1-215ENST00000533657 IL12RB1P42701 662 aa10.34□□□□□ -0.75
CAPRIN1-215ENST00000533657 RPS9P46781 194 aaKnown RBP10.34□□□□□ -0.75
CAPRIN1-215ENST00000533657 GRIA4P48058 902 aa10.34□□□□□ -0.75
CAPRIN1-215ENST00000533657 MAP7Q14244 749 aa10.34□□□□□ -0.75
CAPRIN1-215ENST00000533657 FRG1Q14331 258 aaKnown RBP10.34□□□□□ -0.75
CAPRIN1-215ENST00000533657 IHHQ14623 411 aa10.34□□□□□ -0.75
CAPRIN1-215ENST00000533657 TRIP13Q15645 432 aaPredicted RBP10.34□□□□□ -0.75
CAPRIN1-215ENST00000533657 AGBL2Q5U5Z8 902 aa10.34□□□□□ -0.75
CAPRIN1-215ENST00000533657 NANOGNBQ7Z5D8 188 aa10.34□□□□□ -0.75
CAPRIN1-215ENST00000533657 DSG4Q86SJ6 1040 aa10.34□□□□□ -0.75
CAPRIN1-215ENST00000533657 PRUNE1Q86TP1 453 aa10.34□□□□□ -0.75
CAPRIN1-215ENST00000533657 EXOC3L1Q86VI1 746 aa10.34□□□□□ -0.75
CAPRIN1-215ENST00000533657 TTC8Q8TAM2 541 aa10.34□□□□□ -0.75
CAPRIN1-215ENST00000533657 CLDN23Q96B33 292 aa10.34□□□□□ -0.75
CAPRIN1-215ENST00000533657 CEP41Q9BYV8 373 aa10.34□□□□□ -0.75
CAPRIN1-215ENST00000533657 LTB4R2Q9NPC1 389 aa10.34□□□□□ -0.75
CAPRIN1-215ENST00000533657 MTRF1LQ9UGC7 380 aaKnown RBP10.34□□□□□ -0.75
CAPRIN1-215ENST00000533657 SLCO3A1Q9UIG8 710 aa10.34□□□□□ -0.75
CAPRIN1-215ENST00000533657 CHMP2BQ9UQN3 213 aa10.34□□□□□ -0.75
CAPRIN1-215ENST00000533657 STON1Q9Y6Q2 735 aa10.34□□□□□ -0.75
CAPRIN1-215ENST00000533657 WASF2Q9Y6W5 498 aa10.34□□□□□ -0.75
CAPRIN1-215ENST00000533657 A8MUI8 341 aa10.33□□□□□ -0.76
CAPRIN1-215ENST00000533657 TTC34A8MYJ7 566 aa10.33□□□□□ -0.76
CAPRIN1-215ENST00000533657 NDST3O95803 873 aa10.33□□□□□ -0.76
CAPRIN1-215ENST00000533657 PRNPP04156 253 aa10.33□□□□□ -0.76
CAPRIN1-215ENST00000533657 KRT16P08779 473 aa10.33□□□□□ -0.76
CAPRIN1-215ENST00000533657 ATXN1LP0C7T5 689 aaKnown RBP10.33□□□□□ -0.76
CAPRIN1-215ENST00000533657 CHRNB1P11230 501 aa10.33□□□□□ -0.76
CAPRIN1-215ENST00000533657 PRKCHP24723 683 aa10.33□□□□□ -0.76
CAPRIN1-215ENST00000533657 SERPINA4P29622 427 aa10.33□□□□□ -0.76
CAPRIN1-215ENST00000533657 CD86P42081 329 aa10.33□□□□□ -0.76
CAPRIN1-215ENST00000533657 NPY2RP49146 381 aa10.33□□□□□ -0.76
CAPRIN1-215ENST00000533657 WNT3AP56704 352 aa10.33□□□□□ -0.76
CAPRIN1-215ENST00000533657 BASP1P80723 227 aaKnown RBP10.33□□□□□ -0.76
CAPRIN1-215ENST00000533657 ZXDAP98168 799 aa10.33□□□□□ -0.76
CAPRIN1-215ENST00000533657 MUM1Q2TAK8 710 aa10.33□□□□□ -0.76
CAPRIN1-215ENST00000533657 EOGTQ5NDL2 527 aa10.33□□□□□ -0.76
CAPRIN1-215ENST00000533657 OR8D1Q8WZ84 308 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms