RNA–Protein interactions for RNA: ENST00000533533.5

COPB1-210, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-210ENST00000533533 TXLNBQ8N3L3 684 aa8.79□□□□□ -1
COPB1-210ENST00000533533 PCDH20Q8N6Y1 951 aaKnown RBP8.79□□□□□ -1
COPB1-210ENST00000533533 OR6K2Q8NGY2 324 aa8.79□□□□□ -1
COPB1-210ENST00000533533 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.79□□□□□ -1
COPB1-210ENST00000533533 LMX1AQ8TE12 382 aa8.79□□□□□ -1
COPB1-210ENST00000533533 RNF25Q96BH1 459 aaPredicted RBP8.79□□□□□ -1
COPB1-210ENST00000533533 CCDC97Q96F63 343 aaPredicted RBP8.79□□□□□ -1
COPB1-210ENST00000533533 PRR11Q96HE9 360 aaPredicted RBP8.79□□□□□ -1
COPB1-210ENST00000533533 LENG8Q96PV6 779 aaPredicted RBP8.79□□□□□ -1
COPB1-210ENST00000533533 IL12RB2Q99665 862 aa8.79□□□□□ -1
COPB1-210ENST00000533533 HEPHQ9BQS7 1158 aa8.79□□□□□ -1
COPB1-210ENST00000533533 MAK16Q9BXY0 300 aaKnown RBP8.79□□□□□ -1
COPB1-210ENST00000533533 KLC2Q9H0B6 622 aa8.79□□□□□ -1
COPB1-210ENST00000533533 NOL6Q9H6R4 1146 aaKnown RBP8.79□□□□□ -1
COPB1-210ENST00000533533 ZDHHC6Q9H6R6 413 aa8.79□□□□□ -1
COPB1-210ENST00000533533 ETNK2Q9NVF9 386 aa8.79□□□□□ -1
COPB1-210ENST00000533533 UBA2Q9UBT2 640 aaPredicted RBP8.79□□□□□ -1
COPB1-210ENST00000533533 A0A0A6YYK5 440 aaPredicted RBP8.78□□□□□ -1
COPB1-210ENST00000533533 MACROD2A1Z1Q3 448 aa8.78□□□□□ -1
COPB1-210ENST00000533533 RCCD1A6NED2 376 aa8.78□□□□□ -1
COPB1-210ENST00000533533 CDRT15L2A8MXV6 281 aa8.78□□□□□ -1
COPB1-210ENST00000533533 J3KR12 359 aa8.78□□□□□ -1
COPB1-210ENST00000533533 K7ENP7 123 aa8.78□□□□□ -1
COPB1-210ENST00000533533 KRIT1O00522 736 aa8.78□□□□□ -1
COPB1-210ENST00000533533 FPGTO14772 594 aa8.78□□□□□ -1
COPB1-210ENST00000533533 MUSKO15146 869 aa8.78□□□□□ -1
COPB1-210ENST00000533533 TSPAN6O43657 245 aa8.78□□□□□ -1
COPB1-210ENST00000533533 GCATO75600 419 aa8.78□□□□□ -1
COPB1-210ENST00000533533 PALMO75781 387 aa8.78□□□□□ -1
COPB1-210ENST00000533533 TMCC1O94876 653 aa8.78□□□□□ -1
COPB1-210ENST00000533533 MAP3K6O95382 1288 aa8.78□□□□□ -1
COPB1-210ENST00000533533 IGSF6O95976 241 aa8.78□□□□□ -1
COPB1-210ENST00000533533 PTMAP06454 111 aaKnown RBP8.78□□□□□ -1
COPB1-210ENST00000533533 KDELR1P24390 212 aa8.78□□□□□ -1
COPB1-210ENST00000533533 MLLT3P42568 568 aaPredicted RBP8.78□□□□□ -1
COPB1-210ENST00000533533 CCNHP51946 323 aaPredicted RBP8.78□□□□□ -1
COPB1-210ENST00000533533 PFN3P60673 137 aa8.78□□□□□ -1
COPB1-210ENST00000533533 SNRPD1P62314 119 aaKnown RBP8.78□□□□□ -1
COPB1-210ENST00000533533 EIF2B5Q13144 721 aaKnown RBP8.78□□□□□ -1
COPB1-210ENST00000533533 DPYSL3Q14195 570 aa8.78□□□□□ -1
COPB1-210ENST00000533533 LLGL1Q15334 1064 aa8.78□□□□□ -1
COPB1-210ENST00000533533 NR0B2Q15466 257 aa8.78□□□□□ -1
COPB1-210ENST00000533533 ANKRD20A8PQ5CZ79 823 aa8.78□□□□□ -1
COPB1-210ENST00000533533 PERM1Q5SV97 790 aa8.78□□□□□ -1
COPB1-210ENST00000533533 TPRG1LQ5T0D9 272 aa8.78□□□□□ -1
COPB1-210ENST00000533533 ATXN7L2Q5T6C5 722 aaPredicted RBP8.78□□□□□ -1
COPB1-210ENST00000533533 KIAA1614Q5VZ46 1190 aa8.78□□□□□ -1
COPB1-210ENST00000533533 INO80CQ6PI98 192 aaPredicted RBP8.78□□□□□ -1
COPB1-210ENST00000533533 ARHGAP36Q6ZRI8 547 aa8.78□□□□□ -1
COPB1-210ENST00000533533 PARS2Q7L3T8 475 aaKnown RBP8.78□□□□□ -1
COPB1-210ENST00000533533 RFX6Q8HWS3 928 aa8.78□□□□□ -1
COPB1-210ENST00000533533 TMEM139Q8IV31 216 aa8.78□□□□□ -1
COPB1-210ENST00000533533 CCDC50Q8IVM0 306 aa8.78□□□□□ -1
COPB1-210ENST00000533533 TP53INP2Q8IXH6 220 aa8.78□□□□□ -1
COPB1-210ENST00000533533 ARL14Q8N4G2 192 aa8.78□□□□□ -1
COPB1-210ENST00000533533 ATPAF2Q8N5M1 289 aa8.78□□□□□ -1
COPB1-210ENST00000533533 LZTR1Q8N653 840 aa8.78□□□□□ -1
COPB1-210ENST00000533533 NPWQ8N729 165 aa8.78□□□□□ -1
COPB1-210ENST00000533533 CCDC112Q8NEF3 446 aa8.78□□□□□ -1
COPB1-210ENST00000533533 DENND6BQ8NEG7 585 aa8.78□□□□□ -1
COPB1-210ENST00000533533 NSMCE1Q8WV22 266 aa8.78□□□□□ -1
COPB1-210ENST00000533533 BTN2A2Q8WVV5 523 aa8.78□□□□□ -1
COPB1-210ENST00000533533 ASB12Q8WXK4 309 aa8.78□□□□□ -1
COPB1-210ENST00000533533 RAPGEF5Q92565 580 aa8.78□□□□□ -1
COPB1-210ENST00000533533 RAB7BQ96AH8 199 aa8.78□□□□□ -1
COPB1-210ENST00000533533 MED8Q96G25 268 aa8.78□□□□□ -1
COPB1-210ENST00000533533 EXOC2Q96KP1 924 aa8.78□□□□□ -1
COPB1-210ENST00000533533 CINPQ9BW66 212 aaPredicted RBP8.78□□□□□ -1
COPB1-210ENST00000533533 BOCQ9BWV1 1114 aa8.78□□□□□ -1
COPB1-210ENST00000533533 LRRC19Q9H756 370 aa8.78□□□□□ -1
COPB1-210ENST00000533533 DDX56Q9NY93 547 aaKnown RBP8.78□□□□□ -1
COPB1-210ENST00000533533 RCOR3Q9P2K3 495 aaPredicted RBP8.78□□□□□ -1
COPB1-210ENST00000533533 HECAQ9UBI9 543 aaPredicted RBP8.78□□□□□ -1
COPB1-210ENST00000533533 REXO2Q9Y3B8 237 aaKnown RBP8.78□□□□□ -1
COPB1-210ENST00000533533 ALG6Q9Y672 507 aa8.78□□□□□ -1
COPB1-210ENST00000533533 DUSP10Q9Y6W6 482 aa8.78□□□□□ -1
COPB1-210ENST00000533533 PMS2P1A4D2B8 440 aa8.77□□□□□ -1.01
COPB1-210ENST00000533533 C16orf96A6NNT2 1141 aa8.77□□□□□ -1.01
COPB1-210ENST00000533533 LMO7DNF2Z398 122 aa8.77□□□□□ -1.01
COPB1-210ENST00000533533 NEMP1O14524 444 aa8.77□□□□□ -1.01
COPB1-210ENST00000533533 PRAMEF11O60813 436 aa8.77□□□□□ -1.01
COPB1-210ENST00000533533 CD160O95971 181 aa8.77□□□□□ -1.01
COPB1-210ENST00000533533 GKP32189 559 aa8.77□□□□□ -1.01
COPB1-210ENST00000533533 RPIAP49247 311 aa8.77□□□□□ -1.01
COPB1-210ENST00000533533 ARSEP51690 589 aa8.77□□□□□ -1.01
COPB1-210ENST00000533533 PDX1P52945 283 aa8.77□□□□□ -1.01
COPB1-210ENST00000533533 DYNLT1P63172 113 aa8.77□□□□□ -1.01
COPB1-210ENST00000533533 RAD51Q06609 339 aa8.77□□□□□ -1.01
COPB1-210ENST00000533533 CLN3Q13286 438 aa8.77□□□□□ -1.01
COPB1-210ENST00000533533 TCEAL1Q15170 157 aa8.77□□□□□ -1.01
COPB1-210ENST00000533533 IFI16Q16666 785 aaKnown RBP8.77□□□□□ -1.01
COPB1-210ENST00000533533 ZNF805Q5CZA5 627 aa8.77□□□□□ -1.01
COPB1-210ENST00000533533 PRRT3Q5FWE3 981 aa8.77□□□□□ -1.01
COPB1-210ENST00000533533 C6orf132Q5T0Z8 1188 aa8.77□□□□□ -1.01
COPB1-210ENST00000533533 KAZNQ674X7 775 aa8.77□□□□□ -1.01
COPB1-210ENST00000533533 FOXR1Q6PIV2 292 aa8.77□□□□□ -1.01
COPB1-210ENST00000533533 CRTC1Q6UUV9 634 aa8.77□□□□□ -1.01
COPB1-210ENST00000533533 CCDC81Q6ZN84 652 aa8.77□□□□□ -1.01
COPB1-210ENST00000533533 CLEC14AQ86T13 490 aa8.77□□□□□ -1.01
COPB1-210ENST00000533533 ARHGAP12Q8IWW6 846 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms