RNA–Protein interactions for RNA: ENST00000533089.5

TGFBR3-210, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 6,455 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-210ENST00000533089 BTBD9Q96Q07 612 aa6.99□□□□□ -1.29
TGFBR3-210ENST00000533089 RMND5AQ9H871 391 aa6.99□□□□□ -1.29
TGFBR3-210ENST00000533089 NTN4Q9HB63 628 aa6.99□□□□□ -1.29
TGFBR3-210ENST00000533089 ABCB9Q9NP78 766 aa6.99□□□□□ -1.29
TGFBR3-210ENST00000533089 TREM1Q9NP99 234 aa6.99□□□□□ -1.29
TGFBR3-210ENST00000533089 BLOC1S4Q9NUP1 217 aa6.99□□□□□ -1.29
TGFBR3-210ENST00000533089 DPP7Q9UHL4 492 aa6.99□□□□□ -1.29
TGFBR3-210ENST00000533089 PCDHGC3Q9UN70 934 aa6.99□□□□□ -1.29
TGFBR3-210ENST00000533089 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.99□□□□□ -1.293e-6■■□□□ 14.3
TGFBR3-210ENST00000533089 YARS2Q9Y2Z4 477 aaKnown RBP6.99□□□□□ -1.29
TGFBR3-210ENST00000533089 GRIN2DO15399 1336 aa6.99□□□□□ -1.29
TGFBR3-210ENST00000533089 DCXO43602 365 aa6.99□□□□□ -1.29
TGFBR3-210ENST00000533089 TSPAN3O60637 253 aa6.99□□□□□ -1.29
TGFBR3-210ENST00000533089 PNPP00491 289 aa6.99□□□□□ -1.29
TGFBR3-210ENST00000533089 MBP02144 154 aa6.99□□□□□ -1.29
TGFBR3-210ENST00000533089 RPS3P23396 243 aaKnown RBP eCLIP6.99□□□□□ -1.292e-8■■■□□ 18.1
TGFBR3-210ENST00000533089 GTF2E2P29084 291 aaKnown RBP6.99□□□□□ -1.29
TGFBR3-210ENST00000533089 EVI2BP34910 448 aa6.99□□□□□ -1.29
TGFBR3-210ENST00000533089 SULT2A1Q06520 285 aa6.99□□□□□ -1.29
TGFBR3-210ENST00000533089 RBBP4Q09028 425 aa6.99□□□□□ -1.29
TGFBR3-210ENST00000533089 BNIP2Q12982 314 aa6.99□□□□□ -1.29
TGFBR3-210ENST00000533089 UBAP2LQ14157 1087 aaKnown RBP6.99□□□□□ -1.29
TGFBR3-210ENST00000533089 SPATS1Q496A3 300 aa6.99□□□□□ -1.29
TGFBR3-210ENST00000533089 MPP7Q5T2T1 576 aa6.99□□□□□ -1.29
TGFBR3-210ENST00000533089 PXDC1Q5TGL8 231 aa6.99□□□□□ -1.29
TGFBR3-210ENST00000533089 LCN1P1Q5VSP4 162 aa6.99□□□□□ -1.29
TGFBR3-210ENST00000533089 ZCCHC12Q6PEW1 402 aa6.99□□□□□ -1.29
TGFBR3-210ENST00000533089 ZC3HC1Q86WB0 502 aaKnown RBP6.99□□□□□ -1.29
TGFBR3-210ENST00000533089 RAVER1Q8IY67 606 aaKnown RBP6.99□□□□□ -1.29
TGFBR3-210ENST00000533089 MEIOBQ8N635 442 aa6.99□□□□□ -1.29
TGFBR3-210ENST00000533089 ACER1Q8TDN7 264 aa6.99□□□□□ -1.29
TGFBR3-210ENST00000533089 PIGKQ92643 395 aa6.99□□□□□ -1.29
TGFBR3-210ENST00000533089 BBS4Q96RK4 519 aa6.99□□□□□ -1.29
TGFBR3-210ENST00000533089 RIT2Q99578 217 aa6.99□□□□□ -1.29
TGFBR3-210ENST00000533089 CHIAQ9BZP6 476 aa6.99□□□□□ -1.29
TGFBR3-210ENST00000533089 IFT22Q9H7X7 185 aa6.99□□□□□ -1.29
TGFBR3-210ENST00000533089 TBX20Q9UMR3 447 aa6.99□□□□□ -1.29
TGFBR3-210ENST00000533089 PCDHB2Q9Y5E7 798 aa6.99□□□□□ -1.29
TGFBR3-210ENST00000533089 MYPNQ86TC9 1320 aa6.99□□□□□ -1.29
TGFBR3-210ENST00000533089 WWP2O00308 870 aa6.98□□□□□ -1.29
TGFBR3-210ENST00000533089 DFNA5O60443 496 aa6.98□□□□□ -1.29
TGFBR3-210ENST00000533089 THRBP10828 461 aa6.98□□□□□ -1.29
TGFBR3-210ENST00000533089 TNFRSF8P28908 595 aa6.98□□□□□ -1.29
TGFBR3-210ENST00000533089 ANTXR2P58335 489 aa6.98□□□□□ -1.29
TGFBR3-210ENST00000533089 MOGSQ13724 837 aa6.98□□□□□ -1.29
TGFBR3-210ENST00000533089 NFE2Q16621 373 aaPredicted RBP6.98□□□□□ -1.29
TGFBR3-210ENST00000533089 GJB7Q6PEY0 223 aa6.98□□□□□ -1.29
TGFBR3-210ENST00000533089 ZYG11AQ6WRX3 759 aa6.98□□□□□ -1.29
TGFBR3-210ENST00000533089 RGL4Q8IZJ4 473 aa6.98□□□□□ -1.29
TGFBR3-210ENST00000533089 ADCY4Q8NFM4 1077 aa6.98□□□□□ -1.29
TGFBR3-210ENST00000533089 OR4C6Q8NH72 309 aa6.98□□□□□ -1.29
TGFBR3-210ENST00000533089 TCTEX1D2Q8WW35 142 aa6.98□□□□□ -1.29
TGFBR3-210ENST00000533089 ATL1Q8WXF7 558 aa6.98□□□□□ -1.29
TGFBR3-210ENST00000533089 CENPIQ92674 756 aaPredicted RBP6.98□□□□□ -1.29
TGFBR3-210ENST00000533089 SLC39A1Q9NY26 324 aa6.98□□□□□ -1.29
TGFBR3-210ENST00000533089 COPZ2Q9P299 210 aa6.98□□□□□ -1.29
TGFBR3-210ENST00000533089 UBQLN2Q9UHD9 624 aa6.98□□□□□ -1.29
TGFBR3-210ENST00000533089 PADI2Q9Y2J8 665 aa6.98□□□□□ -1.29
TGFBR3-210ENST00000533089 RIC1Q4ADV7 1423 aa6.98□□□□□ -1.29
TGFBR3-210ENST00000533089 PEAK1Q9H792 1746 aa6.98□□□□□ -1.29
TGFBR3-210ENST00000533089 SSU72P8A0A1W2PR75 194 aa6.98□□□□□ -1.29
TGFBR3-210ENST00000533089 ANKRD33BA6NCL7 494 aa6.98□□□□□ -1.29
TGFBR3-210ENST00000533089 C1orf196B1AJZ1 125 aa6.98□□□□□ -1.29
TGFBR3-210ENST00000533089 PDHXO00330 501 aa6.98□□□□□ -1.29
TGFBR3-210ENST00000533089 OR5F1O95221 314 aa6.98□□□□□ -1.29
TGFBR3-210ENST00000533089 FADS2O95864 444 aaKnown RBP6.98□□□□□ -1.29
TGFBR3-210ENST00000533089 AMHP03971 560 aa6.98□□□□□ -1.29
TGFBR3-210ENST00000533089 IL7P13232 177 aa6.98□□□□□ -1.29
TGFBR3-210ENST00000533089 RPA3P35244 121 aaPredicted RBP6.98□□□□□ -1.29
TGFBR3-210ENST00000533089 OAZ1P54368 228 aa6.98□□□□□ -1.29
TGFBR3-210ENST00000533089 FAM98BQ52LJ0 330 aaKnown RBP6.98□□□□□ -1.29
TGFBR3-210ENST00000533089 DEF8Q6ZN54 512 aa6.98□□□□□ -1.29
TGFBR3-210ENST00000533089 MTSS1LQ765P7 747 aa6.98□□□□□ -1.29
TGFBR3-210ENST00000533089 REM2Q8IYK8 340 aaPredicted RBP6.98□□□□□ -1.29
TGFBR3-210ENST00000533089 TRPV1Q8NER1 839 aa6.98□□□□□ -1.29
TGFBR3-210ENST00000533089 FEZF2Q8TBJ5 459 aa6.98□□□□□ -1.29
TGFBR3-210ENST00000533089 SENP6Q9GZR1 1112 aaPredicted RBP6.98□□□□□ -1.29
TGFBR3-210ENST00000533089 BIN3Q9NQY0 253 aa6.98□□□□□ -1.29
TGFBR3-210ENST00000533089 EIF3LQ9Y262 564 aaKnown RBP6.98□□□□□ -1.29
TGFBR3-210ENST00000533089 CNTNAP2Q9UHC6 1331 aa6.98□□□□□ -1.29
TGFBR3-210ENST00000533089 TCRBV5S4A2TA0A5A2 114 aa6.98□□□□□ -1.29
TGFBR3-210ENST00000533089 RGSL1A5PLK6 1076 aa6.98□□□□□ -1.29
TGFBR3-210ENST00000533089 A6NHS1 94 aa6.98□□□□□ -1.29
TGFBR3-210ENST00000533089 NEDD8-MDP1E9PL57 170 aa6.98□□□□□ -1.29
TGFBR3-210ENST00000533089 IFRD1O00458 451 aaPredicted RBP6.98□□□□□ -1.29
TGFBR3-210ENST00000533089 AP2A1O95782 977 aa6.98□□□□□ -1.29
TGFBR3-210ENST00000533089 ANXA11P50995 505 aaKnown RBP6.98□□□□□ -1.29
TGFBR3-210ENST00000533089 DPYSQ14117 519 aa6.98□□□□□ -1.29
TGFBR3-210ENST00000533089 FAM109AQ8N4B1 249 aa6.98□□□□□ -1.29
TGFBR3-210ENST00000533089 FAR2Q96K12 515 aa6.98□□□□□ -1.29
TGFBR3-210ENST00000533089 RBBP8Q99708 897 aa6.98□□□□□ -1.29
TGFBR3-210ENST00000533089 GAL3ST1Q99999 423 aa6.98□□□□□ -1.29
TGFBR3-210ENST00000533089 THUMPD3Q9BV44 507 aaKnown RBP6.98□□□□□ -1.29
TGFBR3-210ENST00000533089 LACRTQ9GZZ8 138 aa6.98□□□□□ -1.29
TGFBR3-210ENST00000533089 ANKEF1Q9NU02 776 aa6.98□□□□□ -1.29
TGFBR3-210ENST00000533089 CMTM6Q9NX76 183 aa6.98□□□□□ -1.29
TGFBR3-210ENST00000533089 FAM53CQ9NYF3 392 aa6.98□□□□□ -1.29
TGFBR3-210ENST00000533089 NKIRAS2Q9NYR9 191 aa6.98□□□□□ -1.29
TGFBR3-210ENST00000533089 SLC24A2Q9UI40 661 aa6.98□□□□□ -1.29
TGFBR3-210ENST00000533089 LEF1Q9UJU2 399 aaPredicted RBP6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms