RNA–Protein interactions for RNA: ENST00000532457.5

PACSIN3-209, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 5

Gene PACSIN3, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-209ENST00000532457 GGT7Q9UJ14 662 aa22.03■■□□□ 1.12
PACSIN3-209ENST00000532457 MUC22E2RYF6 1773 aaPredicted RBP22.03■■□□□ 1.12
PACSIN3-209ENST00000532457 A0A1W2PPM1 405 aa22.02■■□□□ 1.12
PACSIN3-209ENST00000532457 K7EQS6 105 aa22.02■■□□□ 1.12
PACSIN3-209ENST00000532457 LEFTY1O75610 366 aa22.02■■□□□ 1.12
PACSIN3-209ENST00000532457 CA4P22748 312 aa22.02■■□□□ 1.12
PACSIN3-209ENST00000532457 STARD6P59095 220 aa22.02■■□□□ 1.12
PACSIN3-209ENST00000532457 ST8SIA6P61647 398 aa22.02■■□□□ 1.12
PACSIN3-209ENST00000532457 TMPRSS15P98073 1019 aa22.02■■□□□ 1.12
PACSIN3-209ENST00000532457 SEMG2Q02383 582 aa22.02■■□□□ 1.12
PACSIN3-209ENST00000532457 GRSF1Q12849 480 aaKnown RBP eCLIP22.02■■□□□ 1.121e-7■■■■■ 38.3
PACSIN3-209ENST00000532457 CDKN3Q16667 212 aa22.02■■□□□ 1.12
PACSIN3-209ENST00000532457 EGFLAMQ63HQ2 1017 aa22.02■■□□□ 1.12
PACSIN3-209ENST00000532457 RASSF3Q86WH2 238 aa22.02■■□□□ 1.12
PACSIN3-209ENST00000532457 TTC30BQ8N4P2 665 aa22.02■■□□□ 1.12
PACSIN3-209ENST00000532457 DNAJC1Q96KC8 554 aaKnown RBP22.02■■□□□ 1.12
PACSIN3-209ENST00000532457 NELL2Q99435 816 aa22.02■■□□□ 1.12
PACSIN3-209ENST00000532457 IARS2Q9NSE4 1012 aaKnown RBP22.02■■□□□ 1.12
PACSIN3-209ENST00000532457 THAP10Q9P2Z0 257 aaPredicted RBP22.02■■□□□ 1.12
PACSIN3-209ENST00000532457 F5P12259 2224 aa22.01■■□□□ 1.11
PACSIN3-209ENST00000532457 KRBA1A5PL33 1030 aa22.01■■□□□ 1.11
PACSIN3-209ENST00000532457 APODP05090 189 aa22.01■■□□□ 1.11
PACSIN3-209ENST00000532457 DRD1P21728 446 aa22.01■■□□□ 1.11
PACSIN3-209ENST00000532457 HNF1BP35680 557 aa22.01■■□□□ 1.11
PACSIN3-209ENST00000532457 IL12RB1P42701 662 aa22.01■■□□□ 1.11
PACSIN3-209ENST00000532457 EPHB1P54762 984 aa22.01■■□□□ 1.11
PACSIN3-209ENST00000532457 TAF1AQ15573 450 aaPredicted RBP22.01■■□□□ 1.11
PACSIN3-209ENST00000532457 ARMC3Q5W041 872 aa22.01■■□□□ 1.11
PACSIN3-209ENST00000532457 GDPD4Q6W3E5 623 aa22.01■■□□□ 1.11
PACSIN3-209ENST00000532457 MARK2Q7KZI7 788 aaKnown RBP22.01■■□□□ 1.11
PACSIN3-209ENST00000532457 HDAC10Q969S8 669 aa22.01■■□□□ 1.11
PACSIN3-209ENST00000532457 TBATAQ96M53 351 aa22.01■■□□□ 1.11
PACSIN3-209ENST00000532457 KLHL32Q96NJ5 620 aa22.01■■□□□ 1.11
PACSIN3-209ENST00000532457 PPCSQ9HAB8 311 aa22.01■■□□□ 1.11
PACSIN3-209ENST00000532457 A0A0J9YYE9 177 aa22.01■■□□□ 1.11
PACSIN3-209ENST00000532457 TRBC1P01850 177 aa22.01■■□□□ 1.11
PACSIN3-209ENST00000532457 RECQLP46063 649 aaPredicted RBP22.01■■□□□ 1.11
PACSIN3-209ENST00000532457 GRIA4P48058 902 aa22.01■■□□□ 1.11
PACSIN3-209ENST00000532457 ZNF140P52738 457 aaPredicted RBP22.01■■□□□ 1.11
PACSIN3-209ENST00000532457 RPL26P61254 145 aaKnown RBP22.01■■□□□ 1.11
PACSIN3-209ENST00000532457 ACVR1Q04771 509 aa22.01■■□□□ 1.11
PACSIN3-209ENST00000532457 PON2Q15165 354 aa22.01■■□□□ 1.11
PACSIN3-209ENST00000532457 HNRNPA1L2Q32P51 320 aaKnown RBP22.01■■□□□ 1.11
PACSIN3-209ENST00000532457 KIAA0930Q6ICG6 404 aaPredicted RBP22.01■■□□□ 1.11
PACSIN3-209ENST00000532457 ZNF449Q6P9G9 518 aa22.01■■□□□ 1.11
PACSIN3-209ENST00000532457 STK40Q8N2I9 435 aa22.01■■□□□ 1.11
PACSIN3-209ENST00000532457 RIBC1Q8N443 379 aaPredicted RBP22.01■■□□□ 1.11
PACSIN3-209ENST00000532457 KDM1BQ8NB78 822 aa22.01■■□□□ 1.11
PACSIN3-209ENST00000532457 ERLEC1Q96DZ1 483 aa22.01■■□□□ 1.11
PACSIN3-209ENST00000532457 ZNF641Q96N77 438 aaPredicted RBP22.01■■□□□ 1.11
PACSIN3-209ENST00000532457 MAGEE1Q9HCI5 957 aa22.01■■□□□ 1.11
PACSIN3-209ENST00000532457 SARDHQ9UL12 918 aa22.01■■□□□ 1.11
PACSIN3-209ENST00000532457 RPL26L1Q9UNX3 145 aaKnown RBP22.01■■□□□ 1.11
PACSIN3-209ENST00000532457 SLC8A2Q9UPR5 921 aa22.01■■□□□ 1.11
PACSIN3-209ENST00000532457 KANSL1LA0AUZ9 987 aa22■■□□□ 1.11
PACSIN3-209ENST00000532457 OR51F1A6NGY5 319 aa22■■□□□ 1.11
PACSIN3-209ENST00000532457 A8MX80 341 aa22■■□□□ 1.11
PACSIN3-209ENST00000532457 STK25O00506 426 aa22■■□□□ 1.11
PACSIN3-209ENST00000532457 SIN3BO75182 1162 aa22■■□□□ 1.11
PACSIN3-209ENST00000532457 INHBAP08476 426 aa22■■□□□ 1.11
PACSIN3-209ENST00000532457 CHRM1P11229 460 aaPredicted RBP22■■□□□ 1.11
PACSIN3-209ENST00000532457 PSMA3P25788 255 aa22■■□□□ 1.11
PACSIN3-209ENST00000532457 RAD51Q06609 339 aa22■■□□□ 1.11
PACSIN3-209ENST00000532457 TMEM196Q5HYL7 178 aa22■■□□□ 1.11
PACSIN3-209ENST00000532457 PDPK2PQ6A1A2 396 aa22■■□□□ 1.11
PACSIN3-209ENST00000532457 PACS1Q6VY07 963 aa22■■□□□ 1.11
PACSIN3-209ENST00000532457 TRIM67Q6ZTA4 783 aa22■■□□□ 1.11
PACSIN3-209ENST00000532457 GLT6D1Q7Z4J2 308 aa22■■□□□ 1.11
PACSIN3-209ENST00000532457 OR4K2Q8NGD2 314 aa22■■□□□ 1.11
PACSIN3-209ENST00000532457 FAM129BQ96TA1 746 aa22■■□□□ 1.11
PACSIN3-209ENST00000532457 ZFATQ9P243 1243 aa22■■□□□ 1.11
PACSIN3-209ENST00000532457 IL36AQ9UHA7 158 aa22■■□□□ 1.11
PACSIN3-209ENST00000532457 PPIL1Q9Y3C6 166 aa22■■□□□ 1.11
PACSIN3-209ENST00000532457 STARD13Q9Y3M8 1113 aa22■■□□□ 1.11
PACSIN3-209ENST00000532457 GABRB3P28472 473 aa21.99■■□□□ 1.11
PACSIN3-209ENST00000532457 METAP1P53582 386 aa21.99■■□□□ 1.11
PACSIN3-209ENST00000532457 NLRP9Q7RTR0 991 aa21.99■■□□□ 1.11
PACSIN3-209ENST00000532457 LYSMD3Q7Z3D4 306 aa21.99■■□□□ 1.11
PACSIN3-209ENST00000532457 TRABD2AQ86V40 505 aa21.99■■□□□ 1.11
PACSIN3-209ENST00000532457 DENND6AQ8IWF6 608 aa21.99■■□□□ 1.11
PACSIN3-209ENST00000532457 STYXQ8WUJ0 223 aa21.99■■□□□ 1.11
PACSIN3-209ENST00000532457 MCMBPQ9BTE3 642 aa21.99■■□□□ 1.11
PACSIN3-209ENST00000532457 MFSD1Q9H3U5 465 aa21.99■■□□□ 1.11
PACSIN3-209ENST00000532457 BPIFA1Q9NP55 256 aa21.99■■□□□ 1.11
PACSIN3-209ENST00000532457 NLE1Q9NVX2 485 aaPredicted RBP21.99■■□□□ 1.11
PACSIN3-209ENST00000532457 CACNA2D2Q9NY47 1150 aa21.99■■□□□ 1.11
PACSIN3-209ENST00000532457 ZNF180Q9UJW8 692 aa21.99■■□□□ 1.11
PACSIN3-209ENST00000532457 SHISA7A6NL88 538 aa21.99■■□□□ 1.11
PACSIN3-209ENST00000532457 TNFRSF10AO00220 468 aa21.99■■□□□ 1.11
PACSIN3-209ENST00000532457 CRTAMO95727 393 aa21.99■■□□□ 1.11
PACSIN3-209ENST00000532457 SLC4A1P02730 911 aa21.99■■□□□ 1.11
PACSIN3-209ENST00000532457 CD72P21854 359 aa21.99■■□□□ 1.11
PACSIN3-209ENST00000532457 CTBP1Q13363 440 aa21.99■■□□□ 1.11
PACSIN3-209ENST00000532457 BMPR2Q13873 1038 aa21.99■■□□□ 1.11
PACSIN3-209ENST00000532457 E2F5Q15329 346 aa21.99■■□□□ 1.11
PACSIN3-209ENST00000532457 POM121L1PQ3SYA9 428 aa21.99■■□□□ 1.11
PACSIN3-209ENST00000532457 LRRC73Q5JTD7 316 aa21.99■■□□□ 1.11
PACSIN3-209ENST00000532457 CDKL2Q92772 493 aa21.99■■□□□ 1.11
PACSIN3-209ENST00000532457 CDKN2AIPNLQ96HQ2 116 aa21.99■■□□□ 1.11
PACSIN3-209ENST00000532457 RIMKLBQ9ULI2 386 aa21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms