RNA–Protein interactions for RNA: ENST00000532446.5

PPP1CA-208, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 5

Gene PPP1CA, Length 1,465 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-208ENST00000532446 MTAPQ13126 283 aa18.01■□□□□ 0.47
PPP1CA-208ENST00000532446 PIP5KL1Q5T9C9 394 aa18.01■□□□□ 0.47
PPP1CA-208ENST00000532446 AGBL4Q5VU57 503 aa18.01■□□□□ 0.47
PPP1CA-208ENST00000532446 TTC30BQ8N4P2 665 aa18.01■□□□□ 0.47
PPP1CA-208ENST00000532446 PPHLN1Q8NEY8 458 aaKnown RBP18.01■□□□□ 0.47
PPP1CA-208ENST00000532446 HNRNPLLQ8WVV9 542 aaKnown RBP18.01■□□□□ 0.47
PPP1CA-208ENST00000532446 RAB7BQ96AH8 199 aa18.01■□□□□ 0.47
PPP1CA-208ENST00000532446 C9orf72Q96LT7 481 aa18.01■□□□□ 0.47
PPP1CA-208ENST00000532446 CHRAC1Q9NRG0 131 aa18.01■□□□□ 0.47
PPP1CA-208ENST00000532446 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.01■□□□□ 0.47
PPP1CA-208ENST00000532446 B4GALT6Q9UBX8 382 aa18.01■□□□□ 0.47
PPP1CA-208ENST00000532446 SERGEFQ9UGK8 458 aa18.01■□□□□ 0.47
PPP1CA-208ENST00000532446 ZNF711Q9Y462 761 aa18.01■□□□□ 0.47
PPP1CA-208ENST00000532446 SCN8AQ9UQD0 1980 aa18.01■□□□□ 0.47
PPP1CA-208ENST00000532446 FAM237BA0A1B0GVD1 139 aa18.01■□□□□ 0.47
PPP1CA-208ENST00000532446 A0A1W2PP55 124 aa18.01■□□□□ 0.47
PPP1CA-208ENST00000532446 TMEM221A6NGB7 291 aa18.01■□□□□ 0.47
PPP1CA-208ENST00000532446 M0R296 226 aa18.01■□□□□ 0.47
PPP1CA-208ENST00000532446 PI15O43692 258 aa18.01■□□□□ 0.47
PPP1CA-208ENST00000532446 CRTAMO95727 393 aa18.01■□□□□ 0.47
PPP1CA-208ENST00000532446 CYP2A6P11509 494 aaPredicted RBP18.01■□□□□ 0.47
PPP1CA-208ENST00000532446 PGAM1P18669 254 aa18.01■□□□□ 0.47
PPP1CA-208ENST00000532446 VIPR1P32241 457 aa18.01■□□□□ 0.47
PPP1CA-208ENST00000532446 MMP12P39900 470 aa18.01■□□□□ 0.47
PPP1CA-208ENST00000532446 FAM193AP78312 1265 aa18.01■□□□□ 0.47
PPP1CA-208ENST00000532446 LAMB3Q13751 1172 aa18.01■□□□□ 0.47
PPP1CA-208ENST00000532446 SEPT6Q14141 434 aa18.01■□□□□ 0.47
PPP1CA-208ENST00000532446 TAF1AQ15573 450 aaPredicted RBP18.01■□□□□ 0.47
PPP1CA-208ENST00000532446 CRTC1Q6UUV9 634 aa18.01■□□□□ 0.47
PPP1CA-208ENST00000532446 DPPA4Q7L190 304 aa18.01■□□□□ 0.47
PPP1CA-208ENST00000532446 LYSMD3Q7Z3D4 306 aa18.01■□□□□ 0.47
PPP1CA-208ENST00000532446 GLT6D1Q7Z4J2 308 aa18.01■□□□□ 0.47
PPP1CA-208ENST00000532446 TMEM135Q86UB9 458 aa18.01■□□□□ 0.47
PPP1CA-208ENST00000532446 TSPAN33Q86UF1 283 aa18.01■□□□□ 0.47
PPP1CA-208ENST00000532446 CCNJLQ8IV13 435 aa18.01■□□□□ 0.47
PPP1CA-208ENST00000532446 HDDC3Q8N4P3 179 aa18.01■□□□□ 0.47
PPP1CA-208ENST00000532446 TRIM56Q9BRZ2 755 aaKnown RBP18.01■□□□□ 0.47
PPP1CA-208ENST00000532446 CDC42EP4Q9H3Q1 356 aaKnown RBP18.01■□□□□ 0.47
PPP1CA-208ENST00000532446 SEMA4AQ9H3S1 761 aa18.01■□□□□ 0.47
PPP1CA-208ENST00000532446 FBXL12Q9NXK8 326 aa18.01■□□□□ 0.47
PPP1CA-208ENST00000532446 ZC3H7BQ9UGR2 993 aaKnown RBP18.01■□□□□ 0.47
PPP1CA-208ENST00000532446 ARL5AQ9Y689 179 aa18.01■□□□□ 0.47
PPP1CA-208ENST00000532446 LRRK1Q38SD2 2015 aa18■□□□□ 0.47
PPP1CA-208ENST00000532446 A0A0U1RQS6 177 aa18■□□□□ 0.47
PPP1CA-208ENST00000532446 C1orf232A0A0U1RR37 186 aa18■□□□□ 0.47
PPP1CA-208ENST00000532446 AOC1P19801 751 aa18■□□□□ 0.47
PPP1CA-208ENST00000532446 LHCGRP22888 699 aa18■□□□□ 0.47
PPP1CA-208ENST00000532446 PMS2P54278 862 aa18■□□□□ 0.47
PPP1CA-208ENST00000532446 SEMG2Q02383 582 aa18■□□□□ 0.47
PPP1CA-208ENST00000532446 CCDC15Q0P6D6 951 aa18■□□□□ 0.47
PPP1CA-208ENST00000532446 ELP6Q0PNE2 266 aa18■□□□□ 0.47
PPP1CA-208ENST00000532446 TTC31Q49AM3 519 aaPredicted RBP18■□□□□ 0.47
PPP1CA-208ENST00000532446 TSTD2Q5T7W7 516 aa18■□□□□ 0.47
PPP1CA-208ENST00000532446 STEAP4Q687X5 459 aa18■□□□□ 0.47
PPP1CA-208ENST00000532446 ERAP2Q6P179 960 aa18■□□□□ 0.47
PPP1CA-208ENST00000532446 KIAA1324Q6UXG2 1013 aaKnown RBP18■□□□□ 0.47
PPP1CA-208ENST00000532446 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18■□□□□ 0.47
PPP1CA-208ENST00000532446 MAMSTRQ6ZN01 415 aa18■□□□□ 0.47
PPP1CA-208ENST00000532446 USP30Q70CQ3 517 aa18■□□□□ 0.47
PPP1CA-208ENST00000532446 TRMT10CQ7L0Y3 403 aaKnown RBP18■□□□□ 0.47
PPP1CA-208ENST00000532446 TSTD1Q8NFU3 115 aa18■□□□□ 0.47
PPP1CA-208ENST00000532446 HMGB4Q8WW32 186 aa18■□□□□ 0.47
PPP1CA-208ENST00000532446 EID2BQ96D98 161 aa18■□□□□ 0.47
PPP1CA-208ENST00000532446 ZNF778Q96MU6 729 aa18■□□□□ 0.47
PPP1CA-208ENST00000532446 OMDQ99983 421 aa18■□□□□ 0.47
PPP1CA-208ENST00000532446 GPR63Q9BZJ6 419 aa18■□□□□ 0.47
PPP1CA-208ENST00000532446 PLAC1Q9HBJ0 212 aa18■□□□□ 0.47
PPP1CA-208ENST00000532446 NINJ2Q9NZG7 142 aa18■□□□□ 0.47
PPP1CA-208ENST00000532446 NUMA1Q14980 2115 aa17.99■□□□□ 0.47
PPP1CA-208ENST00000532446 C2orf81A6NN90 581 aa17.99■□□□□ 0.47
PPP1CA-208ENST00000532446 A8MX80 341 aa17.99■□□□□ 0.47
PPP1CA-208ENST00000532446 AP1G1O43747 822 aa17.99■□□□□ 0.47
PPP1CA-208ENST00000532446 RNASEH2AO75792 299 aaKnown RBP17.99■□□□□ 0.47
PPP1CA-208ENST00000532446 USP1O94782 785 aa17.99■□□□□ 0.47
PPP1CA-208ENST00000532446 PAPSS2O95340 614 aaPredicted RBP17.99■□□□□ 0.47
PPP1CA-208ENST00000532446 CLDN7O95471 211 aa17.99■□□□□ 0.47
PPP1CA-208ENST00000532446 ACADMP11310 421 aa17.99■□□□□ 0.47
PPP1CA-208ENST00000532446 PSMA3P25788 255 aa17.99■□□□□ 0.47
PPP1CA-208ENST00000532446 NMBRP28336 390 aa17.99■□□□□ 0.47
PPP1CA-208ENST00000532446 HMGCLP35914 325 aa17.99■□□□□ 0.47
PPP1CA-208ENST00000532446 CLCN5P51795 746 aa17.99■□□□□ 0.47
PPP1CA-208ENST00000532446 ZNF140P52738 457 aaPredicted RBP17.99■□□□□ 0.47
PPP1CA-208ENST00000532446 TAS2R38P59533 333 aa17.99■□□□□ 0.47
PPP1CA-208ENST00000532446 RALGDSQ12967 914 aa17.99■□□□□ 0.47
PPP1CA-208ENST00000532446 KYNUQ16719 465 aa17.99■□□□□ 0.47
PPP1CA-208ENST00000532446 ANKRD20A4Q4UJ75 823 aa17.99■□□□□ 0.47
PPP1CA-208ENST00000532446 BEND6Q5SZJ8 279 aaPredicted RBP17.99■□□□□ 0.47
PPP1CA-208ENST00000532446 LRRC66Q68CR7 880 aa17.99■□□□□ 0.47
PPP1CA-208ENST00000532446 UNC5AQ6ZN44 842 aa17.99■□□□□ 0.47
PPP1CA-208ENST00000532446 NLRP9Q7RTR0 991 aa17.99■□□□□ 0.47
PPP1CA-208ENST00000532446 PALM2Q8IXS6 379 aa17.99■□□□□ 0.47
PPP1CA-208ENST00000532446 STYXQ8WUJ0 223 aa17.99■□□□□ 0.47
PPP1CA-208ENST00000532446 MFSD3Q96ES6 412 aa17.99■□□□□ 0.47
PPP1CA-208ENST00000532446 CFAP36Q96G28 342 aa17.99■□□□□ 0.47
PPP1CA-208ENST00000532446 TTC25Q96NG3 672 aa17.99■□□□□ 0.47
PPP1CA-208ENST00000532446 HHIPQ96QV1 700 aa17.99■□□□□ 0.47
PPP1CA-208ENST00000532446 ZFYVE1Q9HBF4 777 aa17.99■□□□□ 0.47
PPP1CA-208ENST00000532446 LRRC4CQ9HCJ2 640 aa17.99■□□□□ 0.47
PPP1CA-208ENST00000532446 TREX1Q9NSU2 369 aa17.99■□□□□ 0.47
PPP1CA-208ENST00000532446 RIMKLBQ9ULI2 386 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms