RNA–Protein interactions for RNA: ENST00000531967.5

ECHDC1-222, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ECHDC1, Length 2,585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-222ENST00000531967 CHRNA1P02708 482 aa5.28□□□□□ -1.56
ECHDC1-222ENST00000531967 UQCRHP07919 91 aa5.28□□□□□ -1.56
ECHDC1-222ENST00000531967 GPTP24298 496 aa5.28□□□□□ -1.56
ECHDC1-222ENST00000531967 HOXA13P31271 388 aaPredicted RBP5.28□□□□□ -1.56
ECHDC1-222ENST00000531967 SLC16A2P36021 539 aa5.28□□□□□ -1.56
ECHDC1-222ENST00000531967 STARP49675 285 aa5.28□□□□□ -1.56
ECHDC1-222ENST00000531967 EMP3P54852 163 aa5.28□□□□□ -1.56
ECHDC1-222ENST00000531967 FAM3BP58499 235 aaPredicted RBP5.28□□□□□ -1.56
ECHDC1-222ENST00000531967 ATP2C1P98194 919 aaPredicted RBP5.28□□□□□ -1.56
ECHDC1-222ENST00000531967 NFATC3Q12968 1075 aa5.28□□□□□ -1.56
ECHDC1-222ENST00000531967 SPP2Q13103 211 aa5.28□□□□□ -1.56
ECHDC1-222ENST00000531967 PDZK1IP1Q13113 114 aa5.28□□□□□ -1.56
ECHDC1-222ENST00000531967 RUNX2Q13950 521 aa5.28□□□□□ -1.56
ECHDC1-222ENST00000531967 COTL1Q14019 142 aa5.28□□□□□ -1.56
ECHDC1-222ENST00000531967 UGP2Q16851 508 aa5.28□□□□□ -1.56
ECHDC1-222ENST00000531967 ZNF667Q5HYK9 610 aa5.28□□□□□ -1.56
ECHDC1-222ENST00000531967 LIN9Q5TKA1 542 aa5.28□□□□□ -1.56
ECHDC1-222ENST00000531967 WDR88Q6ZMY6 472 aa5.28□□□□□ -1.56
ECHDC1-222ENST00000531967 ZNF813Q6ZN06 617 aa5.28□□□□□ -1.56
ECHDC1-222ENST00000531967 MACC1Q6ZN28 852 aa5.28□□□□□ -1.56
ECHDC1-222ENST00000531967 LILRA2Q8N149 483 aa5.28□□□□□ -1.56
ECHDC1-222ENST00000531967 TCAIMQ8N3R3 496 aa5.28□□□□□ -1.56
ECHDC1-222ENST00000531967 CCDC155Q8N6L0 562 aa5.28□□□□□ -1.56
ECHDC1-222ENST00000531967 ABHD5Q8WTS1 349 aa5.28□□□□□ -1.56
ECHDC1-222ENST00000531967 STARD8Q92502 1023 aa5.28□□□□□ -1.56
ECHDC1-222ENST00000531967 MRPL37Q9BZE1 423 aaKnown RBP5.28□□□□□ -1.56
ECHDC1-222ENST00000531967 CRNKL1Q9BZJ0 848 aaKnown RBP5.28□□□□□ -1.56
ECHDC1-222ENST00000531967 VCX2Q9H322 139 aa5.28□□□□□ -1.56
ECHDC1-222ENST00000531967 USP29Q9HBJ7 922 aa5.28□□□□□ -1.56
ECHDC1-222ENST00000531967 GPN1Q9HCN4 374 aaPredicted RBP5.28□□□□□ -1.56
ECHDC1-222ENST00000531967 FAM105AQ9NUU6 356 aa5.28□□□□□ -1.56
ECHDC1-222ENST00000531967 SPG21Q9NZD8 308 aa5.28□□□□□ -1.56
ECHDC1-222ENST00000531967 OR6C2Q9NZP2 312 aa5.28□□□□□ -1.56
ECHDC1-222ENST00000531967 DNMT3BQ9UBC3 853 aaKnown RBP5.28□□□□□ -1.56
ECHDC1-222ENST00000531967 HSPB7Q9UBY9 170 aa5.28□□□□□ -1.56
ECHDC1-222ENST00000531967 EFCAB5A4FU69 1503 aa5.28□□□□□ -1.56
ECHDC1-222ENST00000531967 LRRC9Q6ZRR7 1453 aa5.28□□□□□ -1.56
ECHDC1-222ENST00000531967 SETD5Q9C0A6 1442 aa5.28□□□□□ -1.56
ECHDC1-222ENST00000531967 CNTLNQ9NXG0 1405 aa5.28□□□□□ -1.56
ECHDC1-222ENST00000531967 SOS2Q07890 1332 aaPredicted RBP5.27□□□□□ -1.57
ECHDC1-222ENST00000531967 ARHGAP42A6NI28 874 aa5.27□□□□□ -1.57
ECHDC1-222ENST00000531967 HS6ST1O60243 411 aa5.27□□□□□ -1.57
ECHDC1-222ENST00000531967 FKTNO75072 461 aa5.27□□□□□ -1.57
ECHDC1-222ENST00000531967 NIPSNAP2O75323 286 aa5.27□□□□□ -1.57
ECHDC1-222ENST00000531967 TACC1O75410 805 aa5.27□□□□□ -1.57
ECHDC1-222ENST00000531967 SEC31AO94979 1220 aaKnown RBP5.27□□□□□ -1.57
ECHDC1-222ENST00000531967 SLC16A8O95907 504 aa5.27□□□□□ -1.57
ECHDC1-222ENST00000531967 CH25HO95992 272 aa5.27□□□□□ -1.57
ECHDC1-222ENST00000531967 CYP3A4P08684 503 aa5.27□□□□□ -1.57
ECHDC1-222ENST00000531967 EPB41P11171 864 aaKnown RBP5.27□□□□□ -1.57
ECHDC1-222ENST00000531967 PKMP14618 531 aaKnown RBP5.27□□□□□ -1.57
ECHDC1-222ENST00000531967 MAGEA1P43355 309 aa5.27□□□□□ -1.57
ECHDC1-222ENST00000531967 CCNHP51946 323 aaPredicted RBP5.27□□□□□ -1.57
ECHDC1-222ENST00000531967 MRPS15P82914 257 aaKnown RBP5.27□□□□□ -1.57
ECHDC1-222ENST00000531967 MZT1Q08AG7 82 aa5.27□□□□□ -1.57
ECHDC1-222ENST00000531967 KLF10Q13118 480 aa5.27□□□□□ -1.57
ECHDC1-222ENST00000531967 DNAJC3Q13217 504 aa5.27□□□□□ -1.57
ECHDC1-222ENST00000531967 LPIN1Q14693 890 aa5.27□□□□□ -1.57
ECHDC1-222ENST00000531967 PTPAQ15257 358 aa5.27□□□□□ -1.57
ECHDC1-222ENST00000531967 ZRSR1Q15695 479 aaKnown RBP5.27□□□□□ -1.57
ECHDC1-222ENST00000531967 IFI44LQ53G44 452 aa5.27□□□□□ -1.57
ECHDC1-222ENST00000531967 KLHL26Q53HC5 615 aa5.27□□□□□ -1.57
ECHDC1-222ENST00000531967 ZNF789Q5FWF6 425 aa5.27□□□□□ -1.57
ECHDC1-222ENST00000531967 CACHD1Q5VU97 1274 aa5.27□□□□□ -1.57
ECHDC1-222ENST00000531967 TMEM81Q6P7N7 255 aa5.27□□□□□ -1.57
ECHDC1-222ENST00000531967 GLDNQ6ZMI3 551 aaPredicted RBP5.27□□□□□ -1.57
ECHDC1-222ENST00000531967 HTR3DQ70Z44 454 aa5.27□□□□□ -1.57
ECHDC1-222ENST00000531967 SRRM1Q8IYB3 904 aaKnown RBP5.27□□□□□ -1.57
ECHDC1-222ENST00000531967 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.27□□□□□ -1.57
ECHDC1-222ENST00000531967 L3MBTL4Q8NA19 623 aa5.27□□□□□ -1.57
ECHDC1-222ENST00000531967 CALML6Q8TD86 181 aa5.27□□□□□ -1.57
ECHDC1-222ENST00000531967 UBASH3BQ8TF42 649 aa5.27□□□□□ -1.57
ECHDC1-222ENST00000531967 KAT2BQ92831 832 aa5.27□□□□□ -1.57
ECHDC1-222ENST00000531967 AZIN2Q96A70 460 aa5.27□□□□□ -1.57
ECHDC1-222ENST00000531967 LMF1Q96S06 567 aa5.27□□□□□ -1.57
ECHDC1-222ENST00000531967 EGFL8Q99944 293 aa5.27□□□□□ -1.57
ECHDC1-222ENST00000531967 CTDSP1Q9GZU7 261 aa5.27□□□□□ -1.57
ECHDC1-222ENST00000531967 CLPBQ9H078 707 aa5.27□□□□□ -1.57
ECHDC1-222ENST00000531967 GOLPH3LQ9H4A5 285 aa5.27□□□□□ -1.57
ECHDC1-222ENST00000531967 MVB12BQ9H7P6 319 aa5.27□□□□□ -1.57
ECHDC1-222ENST00000531967 RPF1Q9H9Y2 349 aaKnown RBP5.27□□□□□ -1.57
ECHDC1-222ENST00000531967 PRMT7Q9NVM4 692 aaPredicted RBP5.27□□□□□ -1.57
ECHDC1-222ENST00000531967 KCNK4Q9NYG8 393 aa5.27□□□□□ -1.57
ECHDC1-222ENST00000531967 KCMF1Q9P0J7 381 aa5.27□□□□□ -1.57
ECHDC1-222ENST00000531967 KLHL9Q9P2J3 617 aa5.27□□□□□ -1.57
ECHDC1-222ENST00000531967 TRPS1Q9UHF7 1281 aa5.27□□□□□ -1.57
ECHDC1-222ENST00000531967 ANGEL1Q9UNK9 670 aaKnown RBP5.27□□□□□ -1.57
ECHDC1-222ENST00000531967 CC2D2AQ9P2K1 1620 aa5.27□□□□□ -1.57
ECHDC1-222ENST00000531967 CARMIL1Q5VZK9 1371 aa5.27□□□□□ -1.57
ECHDC1-222ENST00000531967 CUL7Q14999 1698 aa5.27□□□□□ -1.57
ECHDC1-222ENST00000531967 FGD5Q6ZNL6 1462 aa5.27□□□□□ -1.57
ECHDC1-222ENST00000531967 A0A075B6Q4 140 aa5.27□□□□□ -1.57
ECHDC1-222ENST00000531967 FAM90A8PA6NJQ4 464 aa5.27□□□□□ -1.57
ECHDC1-222ENST00000531967 K7ERQ8 282 aa5.27□□□□□ -1.57
ECHDC1-222ENST00000531967 POLRMTO00411 1230 aaKnown RBP5.27□□□□□ -1.57
ECHDC1-222ENST00000531967 NRP1O14786 923 aa5.27□□□□□ -1.57
ECHDC1-222ENST00000531967 PER2O15055 1255 aa5.27□□□□□ -1.57
ECHDC1-222ENST00000531967 CUTAO60888 179 aa5.27□□□□□ -1.57
ECHDC1-222ENST00000531967 UQCRFS1P1P0C7P4 283 aa5.27□□□□□ -1.57
ECHDC1-222ENST00000531967 FAM90A13PP0C7W8 464 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms