RNA–Protein interactions for RNA: ENST00000531857.1

PKP3-208, Transcript of plakophilin 3, humanhuman

TSL 4

Gene PKP3, Length 687 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-208ENST00000531857 PNLIPP16233 465 aa17.4■□□□□ 0.38
PKP3-208ENST00000531857 JAM2P57087 298 aa17.4■□□□□ 0.38
PKP3-208ENST00000531857 MYL5Q02045 173 aa17.4■□□□□ 0.38
PKP3-208ENST00000531857 RALGDSQ12967 914 aa17.4■□□□□ 0.38
PKP3-208ENST00000531857 HLTFQ14527 1009 aaKnown RBP eCLIP17.4■□□□□ 0.38
PKP3-208ENST00000531857 C16orf72Q14CZ0 275 aa17.4■□□□□ 0.38
PKP3-208ENST00000531857 C14orf28Q4W4Y0 310 aa17.4■□□□□ 0.38
PKP3-208ENST00000531857 TCP11X2Q5H9J9 407 aa17.4■□□□□ 0.38
PKP3-208ENST00000531857 PHF19Q5T6S3 580 aa17.4■□□□□ 0.38
PKP3-208ENST00000531857 BRAT1Q6PJG6 821 aa17.4■□□□□ 0.38
PKP3-208ENST00000531857 DTX1Q86Y01 620 aa17.4■□□□□ 0.38
PKP3-208ENST00000531857 PELI3Q8N2H9 469 aa17.4■□□□□ 0.38
PKP3-208ENST00000531857 HTR3CQ8WXA8 447 aa17.4■□□□□ 0.38
PKP3-208ENST00000531857 TMEM159Q96B96 161 aa17.4■□□□□ 0.38
PKP3-208ENST00000531857 ZNF641Q96N77 438 aaPredicted RBP17.4■□□□□ 0.38
PKP3-208ENST00000531857 SELENOOQ9BVL4 669 aa17.4■□□□□ 0.38
PKP3-208ENST00000531857 LGR4Q9BXB1 951 aa17.4■□□□□ 0.38
PKP3-208ENST00000531857 DPEP2Q9H4A9 486 aa17.4■□□□□ 0.38
PKP3-208ENST00000531857 NLRC4Q9NPP4 1024 aa17.4■□□□□ 0.38
PKP3-208ENST00000531857 TAB2Q9NYJ8 693 aa17.4■□□□□ 0.38
PKP3-208ENST00000531857 ADAM22Q9P0K1 906 aa17.4■□□□□ 0.38
PKP3-208ENST00000531857 FZD10Q9ULW2 581 aa17.4■□□□□ 0.38
PKP3-208ENST00000531857 BSNQ9UPA5 3926 aa17.4■□□□□ 0.38
PKP3-208ENST00000531857 B4GAT1O43505 415 aa17.39■□□□□ 0.37
PKP3-208ENST00000531857 RECQL5O94762 991 aaPredicted RBP17.39■□□□□ 0.37
PKP3-208ENST00000531857 GM2AP17900 193 aa17.39■□□□□ 0.37
PKP3-208ENST00000531857 SOX5P35711 763 aa17.39■□□□□ 0.37
PKP3-208ENST00000531857 ZNF75DP51815 510 aa17.39■□□□□ 0.37
PKP3-208ENST00000531857 GSCP56915 257 aaPredicted RBP17.39■□□□□ 0.37
PKP3-208ENST00000531857 KIAA1024LP59773 190 aa17.39■□□□□ 0.37
PKP3-208ENST00000531857 POLR2FP61218 127 aaKnown RBP17.39■□□□□ 0.37
PKP3-208ENST00000531857 ARHGEF7Q14155 803 aa17.39■□□□□ 0.37
PKP3-208ENST00000531857 GRM3Q14832 879 aa17.39■□□□□ 0.37
PKP3-208ENST00000531857 CFAP58Q5T655 872 aa17.39■□□□□ 0.37
PKP3-208ENST00000531857 SPECC1LQ69YQ0 1117 aa17.39■□□□□ 0.37
PKP3-208ENST00000531857 ATG14Q6ZNE5 492 aa17.39■□□□□ 0.37
PKP3-208ENST00000531857 CELF6Q96J87 481 aaKnown RBP17.39■□□□□ 0.37
PKP3-208ENST00000531857 CMKLR1Q99788 373 aa17.39■□□□□ 0.37
PKP3-208ENST00000531857 LRRC19Q9H756 370 aa17.39■□□□□ 0.37
PKP3-208ENST00000531857 CATSPERBQ9H7T0 1116 aa17.39■□□□□ 0.37
PKP3-208ENST00000531857 RDH14Q9HBH5 336 aa17.39■□□□□ 0.37
PKP3-208ENST00000531857 CYP4F12Q9HCS2 524 aa17.39■□□□□ 0.37
PKP3-208ENST00000531857 ZKSCAN5Q9Y2L8 839 aa17.39■□□□□ 0.37
PKP3-208ENST00000531857 TCRBV5S1A1TA0A578 114 aa17.38■□□□□ 0.37
PKP3-208ENST00000531857 SIGLEC16A6NMB1 481 aa17.38■□□□□ 0.37
PKP3-208ENST00000531857 A8MX80 341 aa17.38■□□□□ 0.37
PKP3-208ENST00000531857 CACNB4O00305 520 aaPredicted RBP17.38■□□□□ 0.37
PKP3-208ENST00000531857 NUDT21O43809 227 aaKnown RBP17.38■□□□□ 0.37
PKP3-208ENST00000531857 PRAMEF11O60813 436 aa17.38■□□□□ 0.37
PKP3-208ENST00000531857 NSFP46459 744 aaKnown RBP17.38■□□□□ 0.37
PKP3-208ENST00000531857 B4GALNT1Q00973 533 aa17.38■□□□□ 0.37
PKP3-208ENST00000531857 CLCA4Q14CN2 919 aa17.38■□□□□ 0.37
PKP3-208ENST00000531857 LIPIQ6XZB0 460 aa17.38■□□□□ 0.37
PKP3-208ENST00000531857 TRIM72Q6ZMU5 477 aa17.38■□□□□ 0.37
PKP3-208ENST00000531857 SRLQ86TD4 932 aa17.38■□□□□ 0.37
PKP3-208ENST00000531857 PHF13Q86YI8 300 aaPredicted RBP17.38■□□□□ 0.37
PKP3-208ENST00000531857 TSEN2Q8NCE0 465 aaKnown RBP17.38■□□□□ 0.37
PKP3-208ENST00000531857 C3orf20Q8ND61 904 aa17.38■□□□□ 0.37
PKP3-208ENST00000531857 ENOX1Q8TC92 643 aaKnown RBP17.38■□□□□ 0.37
PKP3-208ENST00000531857 JPH3Q8WXH2 748 aaPredicted RBP17.38■□□□□ 0.37
PKP3-208ENST00000531857 TUBGCP5Q96RT8 1024 aa17.38■□□□□ 0.37
PKP3-208ENST00000531857 SEMA3CQ99985 751 aa17.38■□□□□ 0.37
PKP3-208ENST00000531857 FAM207AQ9NSI2 230 aaPredicted RBP17.38■□□□□ 0.37
PKP3-208ENST00000531857 IMPACTQ9P2X3 320 aa17.38■□□□□ 0.37
PKP3-208ENST00000531857 PCDHB11Q9Y5F2 797 aa17.38■□□□□ 0.37
PKP3-208ENST00000531857 DOPEY2Q9Y3R5 2298 aa17.37■□□□□ 0.37
PKP3-208ENST00000531857 FLNCQ14315 2725 aa17.37■□□□□ 0.37
PKP3-208ENST00000531857 A0A1W2PQC6 194 aa17.37■□□□□ 0.37
PKP3-208ENST00000531857 CFAP69A5D8W1 941 aa17.37■□□□□ 0.37
PKP3-208ENST00000531857 TNFRSF10CO14798 259 aa17.37■□□□□ 0.37
PKP3-208ENST00000531857 CCL4P13236 92 aa17.37■□□□□ 0.37
PKP3-208ENST00000531857 TRIM23P36406 574 aa17.37■□□□□ 0.37
PKP3-208ENST00000531857 ZNF143P52747 638 aaPredicted RBP17.37■□□□□ 0.37
PKP3-208ENST00000531857 MAZP56270 477 aaKnown RBP17.37■□□□□ 0.37
PKP3-208ENST00000531857 OR1D5P58170 312 aa17.37■□□□□ 0.37
PKP3-208ENST00000531857 RPL7AP62424 266 aaKnown RBP17.37■□□□□ 0.37
PKP3-208ENST00000531857 CLEC16AQ2KHT3 1053 aa17.37■□□□□ 0.37
PKP3-208ENST00000531857 AMZ1Q400G9 498 aa17.37■□□□□ 0.37
PKP3-208ENST00000531857 MAP9Q49MG5 647 aa17.37■□□□□ 0.37
PKP3-208ENST00000531857 ZNF574Q6ZN55 896 aaPredicted RBP17.37■□□□□ 0.37
PKP3-208ENST00000531857 AOPEPQ8N6M6 819 aa17.37■□□□□ 0.37
PKP3-208ENST00000531857 ZSCAN1Q8NBB4 408 aa17.37■□□□□ 0.37
PKP3-208ENST00000531857 ECHDC3Q96DC8 303 aa17.37■□□□□ 0.37
PKP3-208ENST00000531857 NSMCE3Q96MG7 304 aa17.37■□□□□ 0.37
PKP3-208ENST00000531857 SLC39A8Q9C0K1 460 aa17.37■□□□□ 0.37
PKP3-208ENST00000531857 VPS16Q9H269 839 aa17.37■□□□□ 0.37
PKP3-208ENST00000531857 ATP13A3Q9H7F0 1226 aa17.37■□□□□ 0.37
PKP3-208ENST00000531857 SPATS2LQ9NUQ6 558 aaKnown RBP17.37■□□□□ 0.37
PKP3-208ENST00000531857 MOSPD1Q9UJG1 213 aa17.37■□□□□ 0.37
PKP3-208ENST00000531857 FGF10O15520 208 aaPredicted RBP17.36■□□□□ 0.37
PKP3-208ENST00000531857 CPNE6O95741 557 aa17.36■□□□□ 0.37
PKP3-208ENST00000531857 HOXC4P09017 264 aaPredicted RBP17.36■□□□□ 0.37
PKP3-208ENST00000531857 ELFN1P0C7U0 828 aa17.36■□□□□ 0.37
PKP3-208ENST00000531857 SFTPCP11686 197 aa17.36■□□□□ 0.37
PKP3-208ENST00000531857 EEF1GP26641 437 aaKnown RBP17.36■□□□□ 0.37
PKP3-208ENST00000531857 SERPINA4P29622 427 aa17.36■□□□□ 0.37
PKP3-208ENST00000531857 CSNK1DP48730 415 aa17.36■□□□□ 0.37
PKP3-208ENST00000531857 PAPOLAP51003 745 aaKnown RBP17.36■□□□□ 0.37
PKP3-208ENST00000531857 ARSDP51689 593 aa17.36■□□□□ 0.37
PKP3-208ENST00000531857 GSDMDP57764 484 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms