RNA–Protein interactions for RNA: ENST00000531741.1

VPS26B-206, Transcript of VPS26, retromer complex component B, humanhuman

TSL 2

Gene VPS26B, Length 2,073 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-206ENST00000531741 ALG1LQ6GMV1 187 aa16.89■□□□□ 0.29
VPS26B-206ENST00000531741 SLC25A23Q9BV35 468 aa16.89■□□□□ 0.29
VPS26B-206ENST00000531741 ERVK-6Q9BXR3 956 aa16.89■□□□□ 0.29
VPS26B-206ENST00000531741 POLR1EQ9GZS1 481 aaKnown RBP16.89■□□□□ 0.29
VPS26B-206ENST00000531741 MARCH4Q9P2E8 410 aaPredicted RBP16.89■□□□□ 0.29
VPS26B-206ENST00000531741 TRIM24O15164 1050 aa16.89■□□□□ 0.29
VPS26B-206ENST00000531741 DNAJA2O60884 412 aa16.89■□□□□ 0.29
VPS26B-206ENST00000531741 PABPC4LP0CB38 370 aaKnown RBP16.89■□□□□ 0.29
VPS26B-206ENST00000531741 GRK4P32298 578 aa16.89■□□□□ 0.29
VPS26B-206ENST00000531741 TLR1Q15399 786 aa16.89■□□□□ 0.29
VPS26B-206ENST00000531741 VARS2Q5ST30 1063 aaKnown RBP16.89■□□□□ 0.29
VPS26B-206ENST00000531741 GPR158Q5T848 1215 aa16.89■□□□□ 0.29
VPS26B-206ENST00000531741 NAIF1Q69YI7 327 aaPredicted RBP16.89■□□□□ 0.29
VPS26B-206ENST00000531741 REP15Q6BDI9 236 aa16.89■□□□□ 0.29
VPS26B-206ENST00000531741 RGMBQ6NW40 437 aa16.89■□□□□ 0.29
VPS26B-206ENST00000531741 LARP4Q71RC2 724 aaKnown RBP eCLIP16.89■□□□□ 0.29
VPS26B-206ENST00000531741 RTN4RL1Q86UN2 441 aaPredicted RBP16.89■□□□□ 0.29
VPS26B-206ENST00000531741 LILRA2Q8N149 483 aa16.89■□□□□ 0.29
VPS26B-206ENST00000531741 PCSK9Q8NBP7 692 aaKnown RBP16.89■□□□□ 0.29
VPS26B-206ENST00000531741 SPDYE1Q8NFV5 336 aaPredicted RBP16.89■□□□□ 0.29
VPS26B-206ENST00000531741 RIN3Q8TB24 985 aa16.89■□□□□ 0.29
VPS26B-206ENST00000531741 NCSTNQ92542 709 aa16.89■□□□□ 0.29
VPS26B-206ENST00000531741 PHF21BQ96EK2 531 aa16.89■□□□□ 0.29
VPS26B-206ENST00000531741 ZNF599Q96NL3 588 aa16.89■□□□□ 0.29
VPS26B-206ENST00000531741 GCNAQ96QF7 691 aa16.89■□□□□ 0.29
VPS26B-206ENST00000531741 ALG9Q9H6U8 611 aa16.89■□□□□ 0.29
VPS26B-206ENST00000531741 RRAGCQ9HB90 399 aa16.89■□□□□ 0.29
VPS26B-206ENST00000531741 TLR8Q9NR97 1041 aaKnown RBP16.89■□□□□ 0.29
VPS26B-206ENST00000531741 COMMD8Q9NX08 183 aa16.89■□□□□ 0.29
VPS26B-206ENST00000531741 MARCH2Q9P0N8 246 aa16.89■□□□□ 0.29
VPS26B-206ENST00000531741 PCNTO95613 3336 aa16.88■□□□□ 0.29
VPS26B-206ENST00000531741 FBP2O00757 339 aa16.88■□□□□ 0.29
VPS26B-206ENST00000531741 UBFD1O14562 309 aaKnown RBP16.88■□□□□ 0.29
VPS26B-206ENST00000531741 PRAMEF11O60813 436 aa16.88■□□□□ 0.29
VPS26B-206ENST00000531741 GPC4O75487 556 aa16.88■□□□□ 0.29
VPS26B-206ENST00000531741 SNRPB2P08579 225 aaKnown RBP16.88■□□□□ 0.29
VPS26B-206ENST00000531741 OGNP20774 298 aaKnown RBP16.88■□□□□ 0.29
VPS26B-206ENST00000531741 PLK1P53350 603 aa16.88■□□□□ 0.29
VPS26B-206ENST00000531741 MRPL58Q14197 206 aaKnown RBP16.88■□□□□ 0.29
VPS26B-206ENST00000531741 RAP1GAP2Q684P5 730 aa16.88■□□□□ 0.29
VPS26B-206ENST00000531741 MRNIPQ6NTE8 343 aa16.88■□□□□ 0.29
VPS26B-206ENST00000531741 C8orf82Q6P1X6 216 aaPredicted RBP16.88■□□□□ 0.29
VPS26B-206ENST00000531741 CYHR1Q6ZMK1 362 aa16.88■□□□□ 0.29
VPS26B-206ENST00000531741 MFN1Q8IWA4 741 aa16.88■□□□□ 0.29
VPS26B-206ENST00000531741 RHEBL1Q8TAI7 183 aa16.88■□□□□ 0.29
VPS26B-206ENST00000531741 FBXO32Q969P5 355 aa16.88■□□□□ 0.29
VPS26B-206ENST00000531741 DUS3LQ96G46 650 aaKnown RBP16.88■□□□□ 0.29
VPS26B-206ENST00000531741 KLHL32Q96NJ5 620 aa16.88■□□□□ 0.29
VPS26B-206ENST00000531741 SPATA16Q9BXB7 569 aa16.88■□□□□ 0.29
VPS26B-206ENST00000531741 EPB41L1Q9H4G0 881 aa16.88■□□□□ 0.29
VPS26B-206ENST00000531741 RETREG1Q9H6L5 497 aa16.88■□□□□ 0.29
VPS26B-206ENST00000531741 TRMT13Q9NUP7 481 aaKnown RBP16.88■□□□□ 0.29
VPS26B-206ENST00000531741 POLR3BQ9NW08 1133 aaPredicted RBP16.88■□□□□ 0.29
VPS26B-206ENST00000531741 GABRQQ9UN88 632 aa16.88■□□□□ 0.29
VPS26B-206ENST00000531741 NOD1Q9Y239 953 aa16.88■□□□□ 0.29
VPS26B-206ENST00000531741 C15orf38-AP3S2A0A0A6YYH1 394 aa16.87■□□□□ 0.29
VPS26B-206ENST00000531741 OR6C75A6NL08 312 aa16.87■□□□□ 0.29
VPS26B-206ENST00000531741 H0YJX3 145 aa16.87■□□□□ 0.29
VPS26B-206ENST00000531741 GLP2RO95838 553 aa16.87■□□□□ 0.29
VPS26B-206ENST00000531741 FGF4P08620 206 aa16.87■□□□□ 0.29
VPS26B-206ENST00000531741 SLC10A3P09131 477 aa16.87■□□□□ 0.29
VPS26B-206ENST00000531741 CD1DP15813 335 aa16.87■□□□□ 0.29
VPS26B-206ENST00000531741 KCNC1P48547 511 aa16.87■□□□□ 0.29
VPS26B-206ENST00000531741 CACNB2Q08289 660 aaPredicted RBP16.87■□□□□ 0.29
VPS26B-206ENST00000531741 PDAP1Q13442 181 aaKnown RBP16.87■□□□□ 0.29
VPS26B-206ENST00000531741 UGT3A2Q3SY77 523 aa16.87■□□□□ 0.29
VPS26B-206ENST00000531741 AGKQ53H12 422 aa16.87■□□□□ 0.29
VPS26B-206ENST00000531741 UNC50Q53HI1 259 aa16.87■□□□□ 0.29
VPS26B-206ENST00000531741 IRAK1BP1Q5VVH5 260 aa16.87■□□□□ 0.29
VPS26B-206ENST00000531741 ARPINQ7Z6K5 226 aa16.87■□□□□ 0.29
VPS26B-206ENST00000531741 TMEM102Q8N9M5 508 aaPredicted RBP16.87■□□□□ 0.29
VPS26B-206ENST00000531741 BRSK1Q8TDC3 778 aa16.87■□□□□ 0.29
VPS26B-206ENST00000531741 SEMA3CQ99985 751 aa16.87■□□□□ 0.29
VPS26B-206ENST00000531741 COPS7BQ9H9Q2 264 aaPredicted RBP16.87■□□□□ 0.29
VPS26B-206ENST00000531741 SPAG4Q9NPE6 437 aa16.87■□□□□ 0.29
VPS26B-206ENST00000531741 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.87■□□□□ 0.29
VPS26B-206ENST00000531741 ADA2Q9NZK5 511 aa16.87■□□□□ 0.29
VPS26B-206ENST00000531741 NDUFA13Q9P0J0 144 aa16.87■□□□□ 0.29
VPS26B-206ENST00000531741 FIS1Q9Y3D6 152 aa16.87■□□□□ 0.29
VPS26B-206ENST00000531741 CD3EAPO15446 510 aaKnown RBP16.87■□□□□ 0.29
VPS26B-206ENST00000531741 RPP40O75818 363 aaKnown RBP16.87■□□□□ 0.29
VPS26B-206ENST00000531741 MSX2P35548 267 aaPredicted RBP16.87■□□□□ 0.29
VPS26B-206ENST00000531741 OR1G1P47890 313 aa16.87■□□□□ 0.29
VPS26B-206ENST00000531741 TIAL1Q01085 375 aaKnown RBP eCLIP16.87■□□□□ 0.29
VPS26B-206ENST00000531741 PPP1R3AQ16821 1122 aa16.87■□□□□ 0.29
VPS26B-206ENST00000531741 ZNF549Q6P9A3 640 aa16.87■□□□□ 0.29
VPS26B-206ENST00000531741 ZNF354CQ86Y25 554 aa16.87■□□□□ 0.29
VPS26B-206ENST00000531741 CLYBLQ8N0X4 340 aa16.87■□□□□ 0.29
VPS26B-206ENST00000531741 RNF148Q8N7C7 305 aa16.87■□□□□ 0.29
VPS26B-206ENST00000531741 PTERQ96BW5 349 aa16.87■□□□□ 0.29
VPS26B-206ENST00000531741 SPATA17Q96L03 361 aa16.87■□□□□ 0.29
VPS26B-206ENST00000531741 TBATAQ96M53 351 aa16.87■□□□□ 0.29
VPS26B-206ENST00000531741 RPRD1AQ96P16 312 aaPredicted RBP16.87■□□□□ 0.29
VPS26B-206ENST00000531741 PKP2Q99959 881 aa16.87■□□□□ 0.29
VPS26B-206ENST00000531741 PDFQ9HBH1 243 aa16.87■□□□□ 0.29
VPS26B-206ENST00000531741 CD300AQ9UGN4 299 aa16.87■□□□□ 0.29
VPS26B-206ENST00000531741 VWA8A3KMH1 1905 aa16.86■□□□□ 0.29
VPS26B-206ENST00000531741 E7ENX8 843 aa16.86■□□□□ 0.29
VPS26B-206ENST00000531741 TXNDC9O14530 226 aa16.86■□□□□ 0.29
VPS26B-206ENST00000531741 KIF3CO14782 793 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms