RNA–Protein interactions for RNA: ENST00000531110.5

CD44-231, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 749 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-231ENST00000531110 NFIL3Q16649 462 aa5.72□□□□□ -1.49
CD44-231ENST00000531110 CCDC58Q4VC31 144 aa5.72□□□□□ -1.49
CD44-231ENST00000531110 STRIP1Q5VSL9 837 aa5.72□□□□□ -1.49
CD44-231ENST00000531110 SHEQ5VZ18 495 aa5.72□□□□□ -1.49
CD44-231ENST00000531110 METTL21CQ5VZV1 264 aa5.72□□□□□ -1.49
CD44-231ENST00000531110 HAUS3Q68CZ6 603 aa5.72□□□□□ -1.49
CD44-231ENST00000531110 FCRL6Q6DN72 434 aa5.72□□□□□ -1.49
CD44-231ENST00000531110 RWDD4Q6NW29 188 aaKnown RBP5.72□□□□□ -1.49
CD44-231ENST00000531110 FAM173BQ6P4H8 233 aa5.72□□□□□ -1.49
CD44-231ENST00000531110 C16orf54Q6UWD8 224 aa5.72□□□□□ -1.49
CD44-231ENST00000531110 ZDHHC24Q6UX98 284 aa5.72□□□□□ -1.49
CD44-231ENST00000531110 AKAP14Q86UN6 197 aa5.72□□□□□ -1.49
CD44-231ENST00000531110 SFR1Q86XK3 245 aa5.72□□□□□ -1.49
CD44-231ENST00000531110 CACNA2D3Q8IZS8 1091 aa5.72□□□□□ -1.49
CD44-231ENST00000531110 KIRREL3Q8IZU9 778 aa5.72□□□□□ -1.49
CD44-231ENST00000531110 ELMOD1Q8N336 334 aa5.72□□□□□ -1.49
CD44-231ENST00000531110 CSGALNACT2Q8N6G5 542 aa5.72□□□□□ -1.49
CD44-231ENST00000531110 DNAAF3Q8N9W5 541 aa5.72□□□□□ -1.49
CD44-231ENST00000531110 NOA1Q8NC60 698 aaKnown RBP5.72□□□□□ -1.49
CD44-231ENST00000531110 OR52K1Q8NGK4 314 aa5.72□□□□□ -1.49
CD44-231ENST00000531110 OR8K3Q8NH51 312 aa5.72□□□□□ -1.49
CD44-231ENST00000531110 LILRB4Q8NHJ6 448 aa5.72□□□□□ -1.49
CD44-231ENST00000531110 AGAP11Q8TF27 550 aa5.72□□□□□ -1.49
CD44-231ENST00000531110 PYROXD1Q8WU10 500 aa5.72□□□□□ -1.49
CD44-231ENST00000531110 TRIM63Q969Q1 353 aa5.72□□□□□ -1.49
CD44-231ENST00000531110 DGCR14Q96DF8 476 aaKnown RBP5.72□□□□□ -1.49
CD44-231ENST00000531110 SLC47A1Q96FL8 570 aa5.72□□□□□ -1.49
CD44-231ENST00000531110 CEP170P1Q96L14 293 aa5.72□□□□□ -1.49
CD44-231ENST00000531110 NLRP4Q96MN2 994 aa5.72□□□□□ -1.49
CD44-231ENST00000531110 PPP1R10Q96QC0 940 aaKnown RBP5.72□□□□□ -1.49
CD44-231ENST00000531110 RAB3IPQ96QF0 476 aaPredicted RBP5.72□□□□□ -1.49
CD44-231ENST00000531110 PSD2Q9BQI7 771 aa5.72□□□□□ -1.49
CD44-231ENST00000531110 ERP44Q9BS26 406 aa5.72□□□□□ -1.49
CD44-231ENST00000531110 LMAN2LQ9H0V9 348 aa5.72□□□□□ -1.49
CD44-231ENST00000531110 EHD1Q9H4M9 534 aa5.72□□□□□ -1.49
CD44-231ENST00000531110 C12orf4Q9NQ89 552 aa5.72□□□□□ -1.49
CD44-231ENST00000531110 ARHGEF3Q9NR81 526 aa5.72□□□□□ -1.49
CD44-231ENST00000531110 IARS2Q9NSE4 1012 aaKnown RBP5.72□□□□□ -1.49
CD44-231ENST00000531110 SEMA4GQ9NTN9 838 aa5.72□□□□□ -1.49
CD44-231ENST00000531110 IL37Q9NZH6 218 aa5.72□□□□□ -1.49
CD44-231ENST00000531110 FNIP2Q9P278 1114 aa5.72□□□□□ -1.49
CD44-231ENST00000531110 UVRAGQ9P2Y5 699 aa5.72□□□□□ -1.49
CD44-231ENST00000531110 DKK4Q9UBT3 224 aa5.72□□□□□ -1.49
CD44-231ENST00000531110 CLEC4AQ9UMR7 237 aa5.72□□□□□ -1.49
CD44-231ENST00000531110 STK38LQ9Y2H1 464 aa5.72□□□□□ -1.49
CD44-231ENST00000531110 MRPS17Q9Y2R5 130 aaKnown RBP5.72□□□□□ -1.49
CD44-231ENST00000531110 AFG3L2Q9Y4W6 797 aa5.72□□□□□ -1.49
CD44-231ENST00000531110 CSNK1G3Q9Y6M4 447 aa5.72□□□□□ -1.49
CD44-231ENST00000531110 PTPN23Q9H3S7 1636 aa5.72□□□□□ -1.49
CD44-231ENST00000531110 CUX1P39880 1505 aa5.72□□□□□ -1.49
CD44-231ENST00000531110 UGGT2Q9NYU1 1516 aa5.72□□□□□ -1.49
CD44-231ENST00000531110 MAP3K15Q6ZN16 1313 aa5.72□□□□□ -1.49
CD44-231ENST00000531110 KDM3AQ9Y4C1 1321 aa5.72□□□□□ -1.49
CD44-231ENST00000531110 TOP2BQ02880 1626 aa5.71□□□□□ -1.5
CD44-231ENST00000531110 CEMIPQ8WUJ3 1361 aa5.71□□□□□ -1.5
CD44-231ENST00000531110 A1L4Q6 167 aa5.71□□□□□ -1.5
CD44-231ENST00000531110 EFCAB10A6NFE3 127 aa5.71□□□□□ -1.5
CD44-231ENST00000531110 LINC00473A8K010 186 aa5.71□□□□□ -1.5
CD44-231ENST00000531110 L7N2F9 121 aa5.71□□□□□ -1.5
CD44-231ENST00000531110 DNM1LO00429 736 aa5.71□□□□□ -1.5
CD44-231ENST00000531110 CD3EAPO15446 510 aaKnown RBP5.71□□□□□ -1.5
CD44-231ENST00000531110 HNRNPRO43390 633 aaKnown RBP5.71□□□□□ -1.5
CD44-231ENST00000531110 THAP12O43422 761 aa5.71□□□□□ -1.5
CD44-231ENST00000531110 GATCO43716 136 aaKnown RBP5.71□□□□□ -1.5
CD44-231ENST00000531110 STX6O43752 255 aa5.71□□□□□ -1.5
CD44-231ENST00000531110 GMNNO75496 209 aa5.71□□□□□ -1.5
CD44-231ENST00000531110 GNA14O95837 355 aa5.71□□□□□ -1.5
CD44-231ENST00000531110 FYNP06241 537 aa5.71□□□□□ -1.5
CD44-231ENST00000531110 NR2F6P10588 404 aa5.71□□□□□ -1.5
CD44-231ENST00000531110 PCNAP12004 261 aa5.71□□□□□ -1.5
CD44-231ENST00000531110 HPGDP15428 266 aa5.71□□□□□ -1.5
CD44-231ENST00000531110 TSHRP16473 764 aa5.71□□□□□ -1.5
CD44-231ENST00000531110 PRKACAP17612 351 aa5.71□□□□□ -1.5
CD44-231ENST00000531110 ITPKBP27987 946 aa5.71□□□□□ -1.5
CD44-231ENST00000531110 EPHA3P29320 983 aa5.71□□□□□ -1.5
CD44-231ENST00000531110 IFNA8P32881 189 aa5.71□□□□□ -1.5
CD44-231ENST00000531110 PCK1P35558 622 aa5.71□□□□□ -1.5
CD44-231ENST00000531110 HNF1BP35680 557 aa5.71□□□□□ -1.5
CD44-231ENST00000531110 GPD2P43304 727 aa5.71□□□□□ -1.5
CD44-231ENST00000531110 CDK7P50613 346 aa5.71□□□□□ -1.5
CD44-231ENST00000531110 ARHGDIBP52566 201 aa5.71□□□□□ -1.5
CD44-231ENST00000531110 STX17P56962 302 aa5.71□□□□□ -1.5
CD44-231ENST00000531110 EIF4A1P60842 406 aaKnown RBP5.71□□□□□ -1.5
CD44-231ENST00000531110 RPS3AP61247 264 aaKnown RBP5.71□□□□□ -1.5
CD44-231ENST00000531110 UBE2IP63279 158 aaKnown RBP5.71□□□□□ -1.5
CD44-231ENST00000531110 ECT2LQ008S8 904 aa5.71□□□□□ -1.5
CD44-231ENST00000531110 TIAL1Q01085 375 aaKnown RBP eCLIP5.71□□□□□ -1.5
CD44-231ENST00000531110 ZBTB16Q05516 673 aa5.71□□□□□ -1.5
CD44-231ENST00000531110 RAD51Q06609 339 aa5.71□□□□□ -1.5
CD44-231ENST00000531110 MORC3Q14149 939 aa5.71□□□□□ -1.5
CD44-231ENST00000531110 TOMM20Q15388 145 aa5.71□□□□□ -1.5
CD44-231ENST00000531110 ZNF750Q32MQ0 723 aa5.71□□□□□ -1.5
CD44-231ENST00000531110 WASHC2DQ5SRD0 308 aa5.71□□□□□ -1.5
CD44-231ENST00000531110 C6orf10Q5SRN2 563 aa5.71□□□□□ -1.5
CD44-231ENST00000531110 C10orf62Q5T681 223 aaPredicted RBP5.71□□□□□ -1.5
CD44-231ENST00000531110 AADACL4Q5VUY2 407 aa5.71□□□□□ -1.5
CD44-231ENST00000531110 NIPAL1Q6NVV3 410 aa5.71□□□□□ -1.5
CD44-231ENST00000531110 MZT2BQ6NZ67 158 aa5.71□□□□□ -1.5
CD44-231ENST00000531110 EMBQ6PCB8 327 aa5.71□□□□□ -1.5
CD44-231ENST00000531110 B3GNT6Q6ZMB0 384 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms