RNA–Protein interactions for RNA: ENST00000530893.6

BRCA2-204, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA2, Length 2,011 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-204ENST00000530893 ACVRL1P37023 503 aa17.25■□□□□ 0.35
BRCA2-204ENST00000530893 HERVK_113P63132 956 aa17.25■□□□□ 0.35
BRCA2-204ENST00000530893 MED21Q13503 144 aa17.25■□□□□ 0.35
BRCA2-204ENST00000530893 ZNF678Q5SXM1 525 aa17.25■□□□□ 0.35
BRCA2-204ENST00000530893 GPR158Q5T848 1215 aa17.25■□□□□ 0.35
BRCA2-204ENST00000530893 NADSYN1Q6IA69 706 aa17.25■□□□□ 0.35
BRCA2-204ENST00000530893 TMEM207Q6UWW9 146 aa17.25■□□□□ 0.35
BRCA2-204ENST00000530893 PIP4K2CQ8TBX8 421 aa17.25■□□□□ 0.35
BRCA2-204ENST00000530893 HHIPL1Q96JK4 782 aa17.25■□□□□ 0.35
BRCA2-204ENST00000530893 ZIC5Q96T25 663 aa17.25■□□□□ 0.35
BRCA2-204ENST00000530893 TTLL2Q9BWV7 592 aa17.25■□□□□ 0.35
BRCA2-204ENST00000530893 ERVK-6Q9BXR3 956 aa17.25■□□□□ 0.35
BRCA2-204ENST00000530893 ALG9Q9H6U8 611 aa17.25■□□□□ 0.35
BRCA2-204ENST00000530893 SLC27A5Q9Y2P5 690 aa17.25■□□□□ 0.35
BRCA2-204ENST00000530893 TRAF6Q9Y4K3 522 aa17.25■□□□□ 0.35
BRCA2-204ENST00000530893 SKAP2O75563 359 aaPredicted RBP17.24■□□□□ 0.35
BRCA2-204ENST00000530893 BCAS2O75934 225 aaPredicted RBP17.24■□□□□ 0.35
BRCA2-204ENST00000530893 NDST3O95803 873 aa17.24■□□□□ 0.35
BRCA2-204ENST00000530893 GOT2P00505 430 aaKnown RBP17.24■□□□□ 0.35
BRCA2-204ENST00000530893 PEX2P28328 305 aa17.24■□□□□ 0.35
BRCA2-204ENST00000530893 ATP4BP51164 291 aa17.24■□□□□ 0.35
BRCA2-204ENST00000530893 ARPP19P56211 112 aa17.24■□□□□ 0.35
BRCA2-204ENST00000530893 CEACAM7Q14002 265 aa17.24■□□□□ 0.35
BRCA2-204ENST00000530893 LPCAT4Q643R3 524 aa17.24■□□□□ 0.35
BRCA2-204ENST00000530893 ANKS3Q6ZW76 656 aa17.24■□□□□ 0.35
BRCA2-204ENST00000530893 CATSPER1Q8NEC5 780 aa17.24■□□□□ 0.35
BRCA2-204ENST00000530893 BLOC1S5Q8TDH9 187 aa17.24■□□□□ 0.35
BRCA2-204ENST00000530893 PHF21BQ96EK2 531 aa17.24■□□□□ 0.35
BRCA2-204ENST00000530893 MGME1Q9BQP7 344 aa17.24■□□□□ 0.35
BRCA2-204ENST00000530893 INTS10Q9NVR2 710 aaKnown RBP17.24■□□□□ 0.35
BRCA2-204ENST00000530893 SEPT3Q9UH03 358 aa17.24■□□□□ 0.35
BRCA2-204ENST00000530893 ARIH1Q9Y4X5 557 aaPredicted RBP17.24■□□□□ 0.35
BRCA2-204ENST00000530893 ASB3Q9Y575 518 aa17.24■□□□□ 0.35
BRCA2-204ENST00000530893 TTC24A2A3L6 582 aaPredicted RBP17.23■□□□□ 0.35
BRCA2-204ENST00000530893 GPC4O75487 556 aa17.23■□□□□ 0.35
BRCA2-204ENST00000530893 SOAT2O75908 522 aa17.23■□□□□ 0.35
BRCA2-204ENST00000530893 CRTAMO95727 393 aa17.23■□□□□ 0.35
BRCA2-204ENST00000530893 PIM1P11309 404 aaPredicted RBP17.23■□□□□ 0.35
BRCA2-204ENST00000530893 CD1DP15813 335 aa17.23■□□□□ 0.35
BRCA2-204ENST00000530893 ACADVLP49748 655 aa17.23■□□□□ 0.35
BRCA2-204ENST00000530893 C1QTNF8P60827 252 aa17.23■□□□□ 0.35
BRCA2-204ENST00000530893 SP3Q02447 781 aa17.23■□□□□ 0.35
BRCA2-204ENST00000530893 PTK2BQ14289 1009 aa17.23■□□□□ 0.35
BRCA2-204ENST00000530893 TYSND1Q2T9J0 566 aa17.23■□□□□ 0.35
BRCA2-204ENST00000530893 SFT2D3Q587I9 215 aa17.23■□□□□ 0.35
BRCA2-204ENST00000530893 FUT10Q6P4F1 479 aa17.23■□□□□ 0.35
BRCA2-204ENST00000530893 RNF19BQ6ZMZ0 732 aa17.23■□□□□ 0.35
BRCA2-204ENST00000530893 LRRC8DQ7L1W4 858 aa17.23■□□□□ 0.35
BRCA2-204ENST00000530893 CIR1Q86X95 450 aaPredicted RBP17.23■□□□□ 0.35
BRCA2-204ENST00000530893 ICA1LQ8NDH6 482 aa17.23■□□□□ 0.35
BRCA2-204ENST00000530893 OR4L1Q8NH43 312 aa17.23■□□□□ 0.35
BRCA2-204ENST00000530893 TOP1MTQ969P6 601 aa17.23■□□□□ 0.35
BRCA2-204ENST00000530893 MARK4Q96L34 752 aa17.23■□□□□ 0.35
BRCA2-204ENST00000530893 CASD1Q96PB1 797 aa17.23■□□□□ 0.35
BRCA2-204ENST00000530893 TRAPPC9Q96Q05 1148 aa17.23■□□□□ 0.35
BRCA2-204ENST00000530893 EBF3Q9H4W6 596 aa17.23■□□□□ 0.35
BRCA2-204ENST00000530893 SUDS3Q9H7L9 328 aaPredicted RBP17.23■□□□□ 0.35
BRCA2-204ENST00000530893 CCSER2Q9H7U1 834 aa17.23■□□□□ 0.35
BRCA2-204ENST00000530893 CATSPERZQ9NTU4 200 aa17.23■□□□□ 0.35
BRCA2-204ENST00000530893 MARCH5Q9NX47 278 aa17.23■□□□□ 0.35
BRCA2-204ENST00000530893 EPS15L1Q9UBC2 864 aa17.23■□□□□ 0.35
BRCA2-204ENST00000530893 DNMT3LQ9UJW3 386 aa17.23■□□□□ 0.35
BRCA2-204ENST00000530893 SARDHQ9UL12 918 aa17.23■□□□□ 0.35
BRCA2-204ENST00000530893 CRYL1Q9Y2S2 319 aa17.23■□□□□ 0.35
BRCA2-204ENST00000530893 PSMD12O00232 456 aaPredicted RBP17.23■□□□□ 0.35
BRCA2-204ENST00000530893 TRIM38O00635 465 aa17.23■□□□□ 0.35
BRCA2-204ENST00000530893 MUSKO15146 869 aa17.23■□□□□ 0.35
BRCA2-204ENST00000530893 CFLARO15519 480 aa17.23■□□□□ 0.35
BRCA2-204ENST00000530893 ACSL4O60488 711 aa17.23■□□□□ 0.35
BRCA2-204ENST00000530893 SELPP16109 830 aa17.23■□□□□ 0.35
BRCA2-204ENST00000530893 XRCC1P18887 633 aaPredicted RBP17.23■□□□□ 0.35
BRCA2-204ENST00000530893 CES1P23141 567 aa17.23■□□□□ 0.35
BRCA2-204ENST00000530893 ALDH1A3P47895 512 aa17.23■□□□□ 0.35
BRCA2-204ENST00000530893 STC1P52823 247 aa17.23■□□□□ 0.35
BRCA2-204ENST00000530893 PLK1P53350 603 aa17.23■□□□□ 0.35
BRCA2-204ENST00000530893 CDH4P55283 916 aa17.23■□□□□ 0.35
BRCA2-204ENST00000530893 RARS2Q5T160 578 aaKnown RBP17.23■□□□□ 0.35
BRCA2-204ENST00000530893 RAB44Q7Z6P3 723 aaPredicted RBP17.23■□□□□ 0.35
BRCA2-204ENST00000530893 LDB1Q86U70 411 aaPredicted RBP17.23■□□□□ 0.35
BRCA2-204ENST00000530893 LGI2Q8N0V4 545 aa17.23■□□□□ 0.35
BRCA2-204ENST00000530893 CLYBLQ8N0X4 340 aa17.23■□□□□ 0.35
BRCA2-204ENST00000530893 DNAJC1Q96KC8 554 aaKnown RBP17.23■□□□□ 0.35
BRCA2-204ENST00000530893 PSKH2Q96QS6 385 aa17.23■□□□□ 0.35
BRCA2-204ENST00000530893 TRIB3Q96RU7 358 aa17.23■□□□□ 0.35
BRCA2-204ENST00000530893 TMEM175Q9BSA9 504 aa17.23■□□□□ 0.35
BRCA2-204ENST00000530893 FAM192AQ9GZU8 254 aa17.23■□□□□ 0.35
BRCA2-204ENST00000530893 CRISPLD1Q9H336 500 aa17.23■□□□□ 0.35
BRCA2-204ENST00000530893 TFB2MQ9H5Q4 396 aaKnown RBP17.23■□□□□ 0.35
BRCA2-204ENST00000530893 KCTD3Q9Y597 815 aa17.23■□□□□ 0.35
BRCA2-204ENST00000530893 ARL5AQ9Y689 179 aa17.23■□□□□ 0.35
BRCA2-204ENST00000530893 CCDC162PA2VCL2 907 aa17.22■□□□□ 0.35
BRCA2-204ENST00000530893 OR51F1A6NGY5 319 aa17.22■□□□□ 0.35
BRCA2-204ENST00000530893 ENPP3O14638 875 aa17.22■□□□□ 0.35
BRCA2-204ENST00000530893 HOXA2O43364 376 aa17.22■□□□□ 0.35
BRCA2-204ENST00000530893 SUPT7LO94864 414 aa17.22■□□□□ 0.35
BRCA2-204ENST00000530893 VNN2O95498 520 aa17.22■□□□□ 0.35
BRCA2-204ENST00000530893 FGF4P08620 206 aa17.22■□□□□ 0.35
BRCA2-204ENST00000530893 ZNF37AP17032 561 aaPredicted RBP17.22■□□□□ 0.35
BRCA2-204ENST00000530893 ATP5C1P36542 298 aaKnown RBP17.22■□□□□ 0.35
BRCA2-204ENST00000530893 SLC11A2P49281 568 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms