RNA–Protein interactions for RNA: ENST00000530004.5

TTC39A-216, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 1 (best) BASIC

Gene TTC39A, Length 1,780 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-216ENST00000530004 TREX1Q9NSU2 369 aa14.47□□□□□ -0.09
TTC39A-216ENST00000530004 CACNA2D2Q9NY47 1150 aa14.47□□□□□ -0.09
TTC39A-216ENST00000530004 TXNDC16Q9P2K2 825 aa14.47□□□□□ -0.09
TTC39A-216ENST00000530004 SLC8A2Q9UPR5 921 aa14.47□□□□□ -0.09
TTC39A-216ENST00000530004 PSAT1Q9Y617 370 aa14.47□□□□□ -0.09
TTC39A-216ENST00000530004 MYLKQ15746 1914 aa14.46□□□□□ -0.09
TTC39A-216ENST00000530004 TRIM49D1C9J1S8 452 aa14.46□□□□□ -0.09
TTC39A-216ENST00000530004 GOLGA8TH3BQL2 631 aa14.46□□□□□ -0.09
TTC39A-216ENST00000530004 STK25O00506 426 aa14.46□□□□□ -0.09
TTC39A-216ENST00000530004 SHOX2O60902 331 aaPredicted RBP14.46□□□□□ -0.09
TTC39A-216ENST00000530004 VAPBO95292 243 aa14.46□□□□□ -0.09
TTC39A-216ENST00000530004 PRKCGP05129 697 aa14.46□□□□□ -0.09
TTC39A-216ENST00000530004 HLA-EP13747 358 aa14.46□□□□□ -0.09
TTC39A-216ENST00000530004 PAMP19021 973 aa14.46□□□□□ -0.09
TTC39A-216ENST00000530004 AP1S1P61966 158 aa14.46□□□□□ -0.09
TTC39A-216ENST00000530004 TRAF2Q12933 501 aa14.46□□□□□ -0.09
TTC39A-216ENST00000530004 LRRC32Q14392 662 aa14.46□□□□□ -0.09
TTC39A-216ENST00000530004 CNGA3Q16281 694 aa14.46□□□□□ -0.09
TTC39A-216ENST00000530004 TSTD2Q5T7W7 516 aa14.46□□□□□ -0.09
TTC39A-216ENST00000530004 ZNF366Q8N895 744 aa14.46□□□□□ -0.09
TTC39A-216ENST00000530004 ANKRD42Q8N9B4 389 aa14.46□□□□□ -0.09
TTC39A-216ENST00000530004 PJA1Q8NG27 643 aa14.46□□□□□ -0.09
TTC39A-216ENST00000530004 BLOC1S5Q8TDH9 187 aa14.46□□□□□ -0.09
TTC39A-216ENST00000530004 PDCD6IPQ8WUM4 868 aaKnown RBP14.46□□□□□ -0.09
TTC39A-216ENST00000530004 ISG20Q96AZ6 181 aaKnown RBP14.46□□□□□ -0.09
TTC39A-216ENST00000530004 RMDN1Q96DB5 314 aa14.46□□□□□ -0.09
TTC39A-216ENST00000530004 KLF6Q99612 283 aaPredicted RBP14.46□□□□□ -0.09
TTC39A-216ENST00000530004 CPNE1Q99829 537 aa14.46□□□□□ -0.09
TTC39A-216ENST00000530004 IARS2Q9NSE4 1012 aaKnown RBP14.46□□□□□ -0.09
TTC39A-216ENST00000530004 INTS9Q9NV88 658 aaKnown RBP14.46□□□□□ -0.09
TTC39A-216ENST00000530004 STON1Q9Y6Q2 735 aa14.46□□□□□ -0.09
TTC39A-216ENST00000530004 A6NNZ2 444 aa14.45□□□□□ -0.1
TTC39A-216ENST00000530004 GOLGA8RI6L899 631 aa14.45□□□□□ -0.1
TTC39A-216ENST00000530004 IGSF6O95976 241 aa14.45□□□□□ -0.1
TTC39A-216ENST00000530004 PRLP01236 227 aa14.45□□□□□ -0.1
TTC39A-216ENST00000530004 PDHA1P08559 390 aa14.45□□□□□ -0.1
TTC39A-216ENST00000530004 PIRTP0C851 137 aa14.45□□□□□ -0.1
TTC39A-216ENST00000530004 CA4P22748 312 aa14.45□□□□□ -0.1
TTC39A-216ENST00000530004 CNTFP26441 200 aa14.45□□□□□ -0.1
TTC39A-216ENST00000530004 NTSR1P30989 418 aa14.45□□□□□ -0.1
TTC39A-216ENST00000530004 GP5P40197 560 aa14.45□□□□□ -0.1
TTC39A-216ENST00000530004 MPP2Q14168 576 aa14.45□□□□□ -0.1
TTC39A-216ENST00000530004 HNRNPA1L2Q32P51 320 aaKnown RBP14.45□□□□□ -0.1
TTC39A-216ENST00000530004 TUBB8Q3ZCM7 444 aa14.45□□□□□ -0.1
TTC39A-216ENST00000530004 HSF5Q4G112 596 aaPredicted RBP14.45□□□□□ -0.1
TTC39A-216ENST00000530004 MROH9Q5TGP6 573 aa14.45□□□□□ -0.1
TTC39A-216ENST00000530004 KIAA0930Q6ICG6 404 aaPredicted RBP14.45□□□□□ -0.1
TTC39A-216ENST00000530004 Q6ZS52 159 aa14.45□□□□□ -0.1
TTC39A-216ENST00000530004 TRMT11Q7Z4G4 463 aaKnown RBP14.45□□□□□ -0.1
TTC39A-216ENST00000530004 PCDH20Q8N6Y1 951 aaKnown RBP14.45□□□□□ -0.1
TTC39A-216ENST00000530004 LPCAT1Q8NF37 534 aa14.45□□□□□ -0.1
TTC39A-216ENST00000530004 OR6K2Q8NGY2 324 aa14.45□□□□□ -0.1
TTC39A-216ENST00000530004 RPLP0P6Q8NHW5 317 aa14.45□□□□□ -0.1
TTC39A-216ENST00000530004 MGARPQ8TDB4 240 aa14.45□□□□□ -0.1
TTC39A-216ENST00000530004 PTPRN2Q92932 1015 aa14.45□□□□□ -0.1
TTC39A-216ENST00000530004 MTBPQ96DY7 904 aa14.45□□□□□ -0.1
TTC39A-216ENST00000530004 SERAC1Q96JX3 654 aa14.45□□□□□ -0.1
TTC39A-216ENST00000530004 ADGRE3Q9BY15 652 aa14.45□□□□□ -0.1
TTC39A-216ENST00000530004 TNKS2Q9H2K2 1166 aa14.45□□□□□ -0.1
TTC39A-216ENST00000530004 MFSD1Q9H3U5 465 aa14.45□□□□□ -0.1
TTC39A-216ENST00000530004 MTG2Q9H4K7 406 aa14.45□□□□□ -0.1
TTC39A-216ENST00000530004 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.45□□□□□ -0.1
TTC39A-216ENST00000530004 EVLQ9UI08 416 aaPredicted RBP14.45□□□□□ -0.1
TTC39A-216ENST00000530004 HMX2A2RU54 273 aa14.45□□□□□ -0.1
TTC39A-216ENST00000530004 MROH6A6NGR9 719 aa14.45□□□□□ -0.1
TTC39A-216ENST00000530004 FAM47DPA6NHR8 397 aa14.45□□□□□ -0.1
TTC39A-216ENST00000530004 PRPF4O43172 522 aaKnown RBP eCLIP14.45□□□□□ -0.1
TTC39A-216ENST00000530004 LDB2O43679 373 aa14.45□□□□□ -0.1
TTC39A-216ENST00000530004 PAPSS2O95340 614 aaPredicted RBP14.45□□□□□ -0.1
TTC39A-216ENST00000530004 KLF8O95600 359 aaPredicted RBP14.45□□□□□ -0.1
TTC39A-216ENST00000530004 PDGFBP01127 241 aaPredicted RBP14.45□□□□□ -0.1
TTC39A-216ENST00000530004 ARNTP27540 789 aa14.45□□□□□ -0.1
TTC39A-216ENST00000530004 WASP42768 502 aa14.45□□□□□ -0.1
TTC39A-216ENST00000530004 ARCN1P48444 511 aaKnown RBP14.45□□□□□ -0.1
TTC39A-216ENST00000530004 GRTP1Q5TC63 336 aa14.45□□□□□ -0.1
TTC39A-216ENST00000530004 Q6ZVU0 165 aa14.45□□□□□ -0.1
TTC39A-216ENST00000530004 STRA8Q7Z7C7 330 aa14.45□□□□□ -0.1
TTC39A-216ENST00000530004 TXNDC5Q8NBS9 432 aaKnown RBP14.45□□□□□ -0.1
TTC39A-216ENST00000530004 FLCNQ8NFG4 579 aa14.45□□□□□ -0.1
TTC39A-216ENST00000530004 OR2AP1Q8NGE2 309 aa14.45□□□□□ -0.1
TTC39A-216ENST00000530004 BRSK1Q8TDC3 778 aa14.45□□□□□ -0.1
TTC39A-216ENST00000530004 GABRG3Q99928 467 aa14.45□□□□□ -0.1
TTC39A-216ENST00000530004 SMG5Q9UPR3 1016 aaKnown RBP14.45□□□□□ -0.1
TTC39A-216ENST00000530004 SIT1Q9Y3P8 196 aa14.45□□□□□ -0.1
TTC39A-216ENST00000530004 MUC3AQ02505 3323 aa14.44□□□□□ -0.1
TTC39A-216ENST00000530004 ADAM23O75077 832 aa14.44□□□□□ -0.1
TTC39A-216ENST00000530004 EPHX1P07099 455 aa14.44□□□□□ -0.1
TTC39A-216ENST00000530004 F7P08709 466 aaPredicted RBP14.44□□□□□ -0.1
TTC39A-216ENST00000530004 PYGBP11216 843 aa14.44□□□□□ -0.1
TTC39A-216ENST00000530004 MAPK8P45983 427 aa14.44□□□□□ -0.1
TTC39A-216ENST00000530004 CSNK1DP48730 415 aa14.44□□□□□ -0.1
TTC39A-216ENST00000530004 SNRPD1P62314 119 aaKnown RBP14.44□□□□□ -0.1
TTC39A-216ENST00000530004 LAMB3Q13751 1172 aa14.44□□□□□ -0.1
TTC39A-216ENST00000530004 THOC5Q13769 683 aaKnown RBP14.44□□□□□ -0.1
TTC39A-216ENST00000530004 CWF19L1Q69YN2 538 aaKnown RBP14.44□□□□□ -0.1
TTC39A-216ENST00000530004 SDE2Q6IQ49 451 aa14.44□□□□□ -0.1
TTC39A-216ENST00000530004 NLRP9Q7RTR0 991 aa14.44□□□□□ -0.1
TTC39A-216ENST00000530004 PLPP6Q8IY26 295 aa14.44□□□□□ -0.1
TTC39A-216ENST00000530004 RYBPQ8N488 228 aaPredicted RBP14.44□□□□□ -0.1
TTC39A-216ENST00000530004 OR13J1Q8NGT2 312 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms