RNA–Protein interactions for RNA: ENST00000529445.1

SORL1-208, Transcript of sortilin related receptor 1, humanhuman

TSL 2

Gene SORL1, Length 616 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORL1-208ENST00000529445 SYNDIG1Q9H7V2 258 aa12.14□□□□□ -0.47
SORL1-208ENST00000529445 PCDH18Q9HCL0 1135 aa12.14□□□□□ -0.47
SORL1-208ENST00000529445 THSD1Q9NS62 852 aa12.14□□□□□ -0.47
SORL1-208ENST00000529445 ETNK2Q9NVF9 386 aa12.14□□□□□ -0.47
SORL1-208ENST00000529445 SIRPGQ9P1W8 387 aa12.14□□□□□ -0.47
SORL1-208ENST00000529445 RCOR3Q9P2K3 495 aaPredicted RBP12.14□□□□□ -0.47
SORL1-208ENST00000529445 GULP1Q9UBP9 304 aa12.14□□□□□ -0.47
SORL1-208ENST00000529445 CAPN11Q9UMQ6 739 aa12.14□□□□□ -0.47
SORL1-208ENST00000529445 DGKBQ9Y6T7 804 aa12.14□□□□□ -0.47
SORL1-208ENST00000529445 UNC13CQ8NB66 2214 aa12.14□□□□□ -0.47
SORL1-208ENST00000529445 HELZ2Q9BYK8 2649 aaKnown RBP12.13□□□□□ -0.47
SORL1-208ENST00000529445 EIF4E1BA6NMX2 242 aaKnown RBP12.13□□□□□ -0.47
SORL1-208ENST00000529445 HTRA2O43464 458 aaPredicted RBP12.13□□□□□ -0.47
SORL1-208ENST00000529445 MAFKO60675 156 aa12.13□□□□□ -0.47
SORL1-208ENST00000529445 PEX11BO96011 259 aa12.13□□□□□ -0.47
SORL1-208ENST00000529445 TNFP01375 233 aa12.13□□□□□ -0.47
SORL1-208ENST00000529445 CYP1A2P05177 515 aa12.13□□□□□ -0.47
SORL1-208ENST00000529445 HOXC4P09017 264 aaPredicted RBP12.13□□□□□ -0.47
SORL1-208ENST00000529445 CR2P20023 1033 aa12.13□□□□□ -0.47
SORL1-208ENST00000529445 VIPR1P32241 457 aa12.13□□□□□ -0.47
SORL1-208ENST00000529445 TLE3Q04726 772 aa12.13□□□□□ -0.47
SORL1-208ENST00000529445 SPIDRQ14159 915 aa12.13□□□□□ -0.47
SORL1-208ENST00000529445 ACOX1Q15067 660 aa12.13□□□□□ -0.47
SORL1-208ENST00000529445 TCEA2Q15560 299 aa12.13□□□□□ -0.47
SORL1-208ENST00000529445 NFKBIBQ15653 356 aa12.13□□□□□ -0.47
SORL1-208ENST00000529445 C3orf38Q5JPI3 329 aa12.13□□□□□ -0.47
SORL1-208ENST00000529445 RALGPS1Q5JS13 557 aa12.13□□□□□ -0.47
SORL1-208ENST00000529445 TXNRD3NBQ6F5E7 133 aa12.13□□□□□ -0.47
SORL1-208ENST00000529445 IGF2-ASQ6U949 168 aa12.13□□□□□ -0.47
SORL1-208ENST00000529445 SPACA3Q8IXA5 215 aa12.13□□□□□ -0.47
SORL1-208ENST00000529445 PLA2G15Q8NCC3 412 aa12.13□□□□□ -0.47
SORL1-208ENST00000529445 OR6C4Q8NGE1 309 aa12.13□□□□□ -0.47
SORL1-208ENST00000529445 OR56A4Q8NGH8 313 aa12.13□□□□□ -0.47
SORL1-208ENST00000529445 PDCD6IPQ8WUM4 868 aaKnown RBP12.13□□□□□ -0.47
SORL1-208ENST00000529445 FUBP1Q96AE4 644 aaKnown RBP12.13□□□□□ -0.47
SORL1-208ENST00000529445 NUS1Q96E22 293 aa12.13□□□□□ -0.47
SORL1-208ENST00000529445 ATXN7L3BQ96GX2 97 aa12.13□□□□□ -0.47
SORL1-208ENST00000529445 BTBD6Q96KE9 485 aa12.13□□□□□ -0.47
SORL1-208ENST00000529445 FCRL3Q96P31 734 aaPredicted RBP12.13□□□□□ -0.47
SORL1-208ENST00000529445 RBM15Q96T37 977 aaKnown RBP eCLIP12.13□□□□□ -0.47
SORL1-208ENST00000529445 FGF22Q9HCT0 170 aa12.13□□□□□ -0.47
SORL1-208ENST00000529445 ASCL3Q9NQ33 180 aa12.13□□□□□ -0.47
SORL1-208ENST00000529445 KCTD5Q9NXV2 234 aa12.13□□□□□ -0.47
SORL1-208ENST00000529445 B4GALT6Q9UBX8 382 aa12.13□□□□□ -0.47
SORL1-208ENST00000529445 GPR34Q9UPC5 381 aa12.13□□□□□ -0.47
SORL1-208ENST00000529445 SATB2Q9UPW6 733 aa12.13□□□□□ -0.47
SORL1-208ENST00000529445 LUC7L2Q9Y383 392 aaKnown RBP12.13□□□□□ -0.47
SORL1-208ENST00000529445 ENTPD2Q9Y5L3 495 aa12.13□□□□□ -0.47
SORL1-208ENST00000529445 AHCTF1Q8WYP5 2266 aa12.13□□□□□ -0.47
SORL1-208ENST00000529445 A0A087X0T9 212 aa12.12□□□□□ -0.47
SORL1-208ENST00000529445 TMEM202A6NGA9 273 aa12.12□□□□□ -0.47
SORL1-208ENST00000529445 A8MX80 341 aa12.12□□□□□ -0.47
SORL1-208ENST00000529445 MYO1FO00160 1098 aa12.12□□□□□ -0.47
SORL1-208ENST00000529445 PDE2AO00408 941 aaPredicted RBP12.12□□□□□ -0.47
SORL1-208ENST00000529445 TNFRSF10CO14798 259 aa12.12□□□□□ -0.47
SORL1-208ENST00000529445 GYPCP04921 128 aa12.12□□□□□ -0.47
SORL1-208ENST00000529445 TPM3P06753 285 aa12.12□□□□□ -0.47
SORL1-208ENST00000529445 FAM228BP0C875 321 aa12.12□□□□□ -0.47
SORL1-208ENST00000529445 CYP2A6P11509 494 aaPredicted RBP12.12□□□□□ -0.47
SORL1-208ENST00000529445 GM2AP17900 193 aa12.12□□□□□ -0.47
SORL1-208ENST00000529445 RBMS1P29558 406 aaKnown RBP12.12□□□□□ -0.47
SORL1-208ENST00000529445 SSR1P43307 286 aaKnown RBP12.12□□□□□ -0.47
SORL1-208ENST00000529445 MMP13P45452 471 aa12.12□□□□□ -0.47
SORL1-208ENST00000529445 UCNP55089 124 aa12.12□□□□□ -0.47
SORL1-208ENST00000529445 CNGA3Q16281 694 aa12.12□□□□□ -0.47
SORL1-208ENST00000529445 HADHQ16836 314 aaKnown RBP12.12□□□□□ -0.47
SORL1-208ENST00000529445 TSR1Q2NL82 804 aaKnown RBP12.12□□□□□ -0.47
SORL1-208ENST00000529445 MARC1Q5VT66 337 aa12.12□□□□□ -0.47
SORL1-208ENST00000529445 BROXQ5VW32 411 aa12.12□□□□□ -0.47
SORL1-208ENST00000529445 ALKBH5Q6P6C2 394 aaKnown RBP12.12□□□□□ -0.47
SORL1-208ENST00000529445 LRRC49Q8IUZ0 686 aa12.12□□□□□ -0.47
SORL1-208ENST00000529445 PGBD5Q8N414 524 aa12.12□□□□□ -0.47
SORL1-208ENST00000529445 ZNF564Q8TBZ8 553 aaPredicted RBP12.12□□□□□ -0.47
SORL1-208ENST00000529445 CPLX3Q8WVH0 158 aa12.12□□□□□ -0.47
SORL1-208ENST00000529445 KCNE4Q8WWG9 221 aa12.12□□□□□ -0.47
SORL1-208ENST00000529445 OR1E3Q8WZA6 343 aa12.12□□□□□ -0.47
SORL1-208ENST00000529445 CCDC74AQ96AQ1 378 aa12.12□□□□□ -0.47
SORL1-208ENST00000529445 COQ10AQ96MF6 247 aa12.12□□□□□ -0.47
SORL1-208ENST00000529445 NSMCE3Q96MG7 304 aa12.12□□□□□ -0.47
SORL1-208ENST00000529445 NOD2Q9HC29 1040 aa12.12□□□□□ -0.47
SORL1-208ENST00000529445 PHTF1Q9UMS5 762 aa12.12□□□□□ -0.47
SORL1-208ENST00000529445 PCDHGC4Q9Y5F7 938 aa12.12□□□□□ -0.47
SORL1-208ENST00000529445 PCDHGA8Q9Y5G5 932 aa12.12□□□□□ -0.47
SORL1-208ENST00000529445 CCDC187A0A096LP49 1063 aa12.11□□□□□ -0.47
SORL1-208ENST00000529445 TTC24A2A3L6 582 aaPredicted RBP12.11□□□□□ -0.47
SORL1-208ENST00000529445 D6RAR5 112 aa12.11□□□□□ -0.47
SORL1-208ENST00000529445 PSMD11O00231 422 aa12.11□□□□□ -0.47
SORL1-208ENST00000529445 NTN3O00634 580 aaPredicted RBP12.11□□□□□ -0.47
SORL1-208ENST00000529445 HEXIM1O94992 359 aaKnown RBP12.11□□□□□ -0.47
SORL1-208ENST00000529445 MYCLP1P12525 358 aaPredicted RBP12.11□□□□□ -0.47
SORL1-208ENST00000529445 KRT10P13645 584 aa12.11□□□□□ -0.47
SORL1-208ENST00000529445 PTMSP20962 102 aa12.11□□□□□ -0.47
SORL1-208ENST00000529445 TRIM23P36406 574 aa12.11□□□□□ -0.47
SORL1-208ENST00000529445 MLLT3P42568 568 aaPredicted RBP12.11□□□□□ -0.47
SORL1-208ENST00000529445 PDX1P52945 283 aa12.11□□□□□ -0.47
SORL1-208ENST00000529445 MAXP61244 160 aa12.11□□□□□ -0.47
SORL1-208ENST00000529445 TRAF2Q12933 501 aa12.11□□□□□ -0.47
SORL1-208ENST00000529445 CCDC122Q5T0U0 273 aa12.11□□□□□ -0.47
SORL1-208ENST00000529445 PNCKQ6P2M8 343 aa12.11□□□□□ -0.47
SORL1-208ENST00000529445 NYAP1Q6ZVC0 841 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms