RNA–Protein interactions for RNA: ENST00000528441.1

CMTM1-210, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 979 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-210ENST00000528441 NLGN3Q9NZ94 848 aa9.12□□□□□ -0.95
CMTM1-210ENST00000528441 B4GALT6Q9UBX8 382 aa9.12□□□□□ -0.95
CMTM1-210ENST00000528441 PHTF1Q9UMS5 762 aa9.12□□□□□ -0.95
CMTM1-210ENST00000528441 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.12□□□□□ -0.95
CMTM1-210ENST00000528441 PCDHGA1Q9Y5H4 931 aa9.12□□□□□ -0.95
CMTM1-210ENST00000528441 RAI2Q9Y5P3 530 aa9.12□□□□□ -0.95
CMTM1-210ENST00000528441 LAMA1P25391 3075 aa9.11□□□□□ -0.95
CMTM1-210ENST00000528441 TSPAN11A1L157 253 aa9.11□□□□□ -0.95
CMTM1-210ENST00000528441 K7ESM1 405 aa9.11□□□□□ -0.95
CMTM1-210ENST00000528441 PDE2AO00408 941 aaPredicted RBP9.11□□□□□ -0.95
CMTM1-210ENST00000528441 TRIM38O00635 465 aa9.11□□□□□ -0.95
CMTM1-210ENST00000528441 MATN3O15232 486 aa9.11□□□□□ -0.95
CMTM1-210ENST00000528441 C1SP09871 688 aa9.11□□□□□ -0.95
CMTM1-210ENST00000528441 ALPIP09923 528 aa9.11□□□□□ -0.95
CMTM1-210ENST00000528441 CCNB1P14635 433 aa9.11□□□□□ -0.95
CMTM1-210ENST00000528441 COMTP21964 271 aa9.11□□□□□ -0.95
CMTM1-210ENST00000528441 GPR1P46091 355 aa9.11□□□□□ -0.95
CMTM1-210ENST00000528441 ACADVLP49748 655 aa9.11□□□□□ -0.95
CMTM1-210ENST00000528441 ZNF75DP51815 510 aa9.11□□□□□ -0.95
CMTM1-210ENST00000528441 PFN3P60673 137 aa9.11□□□□□ -0.95
CMTM1-210ENST00000528441 E2F1Q01094 437 aa9.11□□□□□ -0.95
CMTM1-210ENST00000528441 DSC2Q02487 901 aa9.11□□□□□ -0.95
CMTM1-210ENST00000528441 GBE1Q04446 702 aa9.11□□□□□ -0.95
CMTM1-210ENST00000528441 GALNT2Q10471 571 aa9.11□□□□□ -0.95
CMTM1-210ENST00000528441 TRAF2Q12933 501 aa9.11□□□□□ -0.95
CMTM1-210ENST00000528441 MTM1Q13496 603 aa9.11□□□□□ -0.95
CMTM1-210ENST00000528441 PAFAH1B3Q15102 231 aaKnown RBP9.11□□□□□ -0.95
CMTM1-210ENST00000528441 ELOCQ15369 112 aa9.11□□□□□ -0.95
CMTM1-210ENST00000528441 NR0B2Q15466 257 aa9.11□□□□□ -0.95
CMTM1-210ENST00000528441 PCSK7Q16549 785 aa9.11□□□□□ -0.95
CMTM1-210ENST00000528441 WSCD2Q2TBF2 565 aa9.11□□□□□ -0.95
CMTM1-210ENST00000528441 RALGPS1Q5JS13 557 aa9.11□□□□□ -0.95
CMTM1-210ENST00000528441 CCDC70Q6NSX1 233 aa9.11□□□□□ -0.95
CMTM1-210ENST00000528441 ZCCHC8Q6NZY4 707 aaKnown RBP9.11□□□□□ -0.95
CMTM1-210ENST00000528441 FOXR1Q6PIV2 292 aa9.11□□□□□ -0.95
CMTM1-210ENST00000528441 DOK6Q6PKX4 331 aa9.11□□□□□ -0.95
CMTM1-210ENST00000528441 SARM1Q6SZW1 724 aa9.11□□□□□ -0.95
CMTM1-210ENST00000528441 BZW1Q7L1Q6 419 aaKnown RBP9.11□□□□□ -0.95
CMTM1-210ENST00000528441 TMPRSS7Q7RTY8 843 aa9.11□□□□□ -0.95
CMTM1-210ENST00000528441 EFL1Q7Z2Z2 1120 aaKnown RBP9.11□□□□□ -0.95
CMTM1-210ENST00000528441 TAF8Q7Z7C8 310 aa9.11□□□□□ -0.95
CMTM1-210ENST00000528441 DAAM2Q86T65 1068 aa9.11□□□□□ -0.95
CMTM1-210ENST00000528441 TMPRSS12Q86WS5 348 aa9.11□□□□□ -0.95
CMTM1-210ENST00000528441 ZSWIM9Q86XI8 627 aa9.11□□□□□ -0.95
CMTM1-210ENST00000528441 GKN2Q86XP6 184 aa9.11□□□□□ -0.95
CMTM1-210ENST00000528441 SPC24Q8NBT2 197 aa9.11□□□□□ -0.95
CMTM1-210ENST00000528441 MDM1Q8TC05 714 aa9.11□□□□□ -0.95
CMTM1-210ENST00000528441 IFI44Q8TCB0 444 aa9.11□□□□□ -0.95
CMTM1-210ENST00000528441 RAPGEF5Q92565 580 aa9.11□□□□□ -0.95
CMTM1-210ENST00000528441 TSACCQ96A04 125 aaPredicted RBP9.11□□□□□ -0.95
CMTM1-210ENST00000528441 HAUS1Q96CS2 278 aa9.11□□□□□ -0.95
CMTM1-210ENST00000528441 NXPE2Q96DL1 559 aa9.11□□□□□ -0.95
CMTM1-210ENST00000528441 APOLD1Q96LR9 279 aa9.11□□□□□ -0.95
CMTM1-210ENST00000528441 RNF157Q96PX1 679 aa9.11□□□□□ -0.95
CMTM1-210ENST00000528441 KLF6Q99612 283 aaPredicted RBP9.11□□□□□ -0.95
CMTM1-210ENST00000528441 RBSNQ9H1K0 784 aa9.11□□□□□ -0.95
CMTM1-210ENST00000528441 PHPT1Q9NRX4 125 aaPredicted RBP9.11□□□□□ -0.95
CMTM1-210ENST00000528441 TOR4AQ9NXH8 423 aa9.11□□□□□ -0.95
CMTM1-210ENST00000528441 NCKIPSDQ9NZQ3 722 aa9.11□□□□□ -0.95
CMTM1-210ENST00000528441 CD84Q9UIB8 345 aa9.11□□□□□ -0.95
CMTM1-210ENST00000528441 INTUQ9ULD6 942 aa9.11□□□□□ -0.95
CMTM1-210ENST00000528441 CLCA2Q9UQC9 943 aa9.11□□□□□ -0.95
CMTM1-210ENST00000528441 CHKBQ9Y259 395 aa9.11□□□□□ -0.95
CMTM1-210ENST00000528441 KCNK1O00180 336 aa9.1□□□□□ -0.95
CMTM1-210ENST00000528441 SPINT1O43278 529 aa9.1□□□□□ -0.95
CMTM1-210ENST00000528441 PGLSO95336 258 aa9.1□□□□□ -0.95
CMTM1-210ENST00000528441 ASMTLO95671 621 aa9.1□□□□□ -0.95
CMTM1-210ENST00000528441 JCHAINP01591 159 aa9.1□□□□□ -0.95
CMTM1-210ENST00000528441 HLA-DQB2P05538 268 aa9.1□□□□□ -0.95
CMTM1-210ENST00000528441 CCNCP24863 283 aa9.1□□□□□ -0.95
CMTM1-210ENST00000528441 CETN2P41208 172 aa9.1□□□□□ -0.95
CMTM1-210ENST00000528441 CD86P42081 329 aa9.1□□□□□ -0.95
CMTM1-210ENST00000528441 PEX5P50542 639 aa9.1□□□□□ -0.95
CMTM1-210ENST00000528441 PRSS12P56730 875 aa9.1□□□□□ -0.95
CMTM1-210ENST00000528441 SRP54P61011 504 aaKnown RBP9.1□□□□□ -0.95
CMTM1-210ENST00000528441 EIF2B5Q13144 721 aaKnown RBP9.1□□□□□ -0.95
CMTM1-210ENST00000528441 ILKQ13418 452 aa9.1□□□□□ -0.95
CMTM1-210ENST00000528441 TFDP2Q14188 446 aa9.1□□□□□ -0.95
CMTM1-210ENST00000528441 PDK1Q15118 436 aa9.1□□□□□ -0.95
CMTM1-210ENST00000528441 CNGA3Q16281 694 aa9.1□□□□□ -0.95
CMTM1-210ENST00000528441 ASTE1Q2TB18 679 aaPredicted RBP9.1□□□□□ -0.95
CMTM1-210ENST00000528441 LIPIQ6XZB0 460 aa9.1□□□□□ -0.95
CMTM1-210ENST00000528441 CCNI2Q6ZMN8 369 aaPredicted RBP9.1□□□□□ -0.95
CMTM1-210ENST00000528441 KDELC2Q7Z4H8 507 aa9.1□□□□□ -0.95
CMTM1-210ENST00000528441 CCDC170Q8IYT3 715 aa9.1□□□□□ -0.95
CMTM1-210ENST00000528441 TXLNBQ8N3L3 684 aa9.1□□□□□ -0.95
CMTM1-210ENST00000528441 SLC25A45Q8N413 288 aa9.1□□□□□ -0.95
CMTM1-210ENST00000528441 PGBD5Q8N414 524 aa9.1□□□□□ -0.95
CMTM1-210ENST00000528441 FSTL5Q8N475 847 aaPredicted RBP9.1□□□□□ -0.95
CMTM1-210ENST00000528441 OR56A4Q8NGH8 313 aa9.1□□□□□ -0.95
CMTM1-210ENST00000528441 CCHCR1Q8TD31 782 aa9.1□□□□□ -0.95
CMTM1-210ENST00000528441 TSC1Q92574 1164 aa9.1□□□□□ -0.95
CMTM1-210ENST00000528441 GATA6Q92908 595 aa9.1□□□□□ -0.95
CMTM1-210ENST00000528441 CENPTQ96BT3 561 aa9.1□□□□□ -0.95
CMTM1-210ENST00000528441 AGAP3Q96P47 875 aa9.1□□□□□ -0.95
CMTM1-210ENST00000528441 FERMT1Q9BQL6 677 aa9.1□□□□□ -0.95
CMTM1-210ENST00000528441 CEP41Q9BYV8 373 aa9.1□□□□□ -0.95
CMTM1-210ENST00000528441 TCEAL2Q9H3H9 227 aaPredicted RBP9.1□□□□□ -0.95
CMTM1-210ENST00000528441 CAAP1Q9H8G2 361 aa9.1□□□□□ -0.95
CMTM1-210ENST00000528441 CYP4F12Q9HCS2 524 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms