RNA–Protein interactions for RNA: ENST00000528396.5

CAPN1-215, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-215ENST00000528396 IGFALSP35858 605 aa13.42□□□□□ -0.26
CAPN1-215ENST00000528396 RPL26P61254 145 aaKnown RBP13.42□□□□□ -0.26
CAPN1-215ENST00000528396 HNRNPKP61978 463 aaKnown RBP eCLIP13.42□□□□□ -0.26
CAPN1-215ENST00000528396 NIPAL4Q0D2K0 466 aa13.42□□□□□ -0.26
CAPN1-215ENST00000528396 RALGDSQ12967 914 aa13.42□□□□□ -0.26
CAPN1-215ENST00000528396 INPP5AQ14642 412 aa13.42□□□□□ -0.26
CAPN1-215ENST00000528396 PRKD1Q15139 912 aaPredicted RBP13.42□□□□□ -0.26
CAPN1-215ENST00000528396 WSCD2Q2TBF2 565 aa13.42□□□□□ -0.26
CAPN1-215ENST00000528396 CCDC157Q569K6 752 aa13.42□□□□□ -0.26
CAPN1-215ENST00000528396 ZNF542PQ5EBM4 170 aa13.42□□□□□ -0.26
CAPN1-215ENST00000528396 LIPIQ6XZB0 460 aa13.42□□□□□ -0.26
CAPN1-215ENST00000528396 CDKL3Q8IVW4 592 aaPredicted RBP13.42□□□□□ -0.26
CAPN1-215ENST00000528396 SLC22A18ASQ8N1D0 253 aa13.42□□□□□ -0.26
CAPN1-215ENST00000528396 EID2Q8N6I1 236 aa13.42□□□□□ -0.26
CAPN1-215ENST00000528396 TP53I13Q8NBR0 393 aaPredicted RBP13.42□□□□□ -0.26
CAPN1-215ENST00000528396 ARRDC2Q8TBH0 407 aa13.42□□□□□ -0.26
CAPN1-215ENST00000528396 SAP25Q8TEE9 199 aa13.42□□□□□ -0.26
CAPN1-215ENST00000528396 HTR3CQ8WXA8 447 aa13.42□□□□□ -0.26
CAPN1-215ENST00000528396 ALG3Q92685 438 aa13.42□□□□□ -0.26
CAPN1-215ENST00000528396 NUS1Q96E22 293 aa13.42□□□□□ -0.26
CAPN1-215ENST00000528396 QKIQ96PU8 341 aaKnown RBP eCLIP13.42□□□□□ -0.26
CAPN1-215ENST00000528396 RBM15Q96T37 977 aaKnown RBP eCLIP13.42□□□□□ -0.26
CAPN1-215ENST00000528396 TDRD1Q9BXT4 1180 aaKnown RBP13.42□□□□□ -0.26
CAPN1-215ENST00000528396 SLC13A1Q9BZW2 595 aa13.42□□□□□ -0.26
CAPN1-215ENST00000528396 SLC25A51Q9H1U9 297 aa13.42□□□□□ -0.26
CAPN1-215ENST00000528396 LZTFL1Q9NQ48 299 aa13.42□□□□□ -0.26
CAPN1-215ENST00000528396 MBNL1Q9NR56 388 aaKnown RBP13.42□□□□□ -0.26
CAPN1-215ENST00000528396 PACSIN2Q9UNF0 486 aaPredicted RBP13.42□□□□□ -0.26
CAPN1-215ENST00000528396 RPL26L1Q9UNX3 145 aaKnown RBP13.42□□□□□ -0.26
CAPN1-215ENST00000528396 APOBEC2Q9Y235 224 aaKnown RBP13.42□□□□□ -0.26
CAPN1-215ENST00000528396 BTBD3Q9Y2F9 522 aa13.42□□□□□ -0.26
CAPN1-215ENST00000528396 EFR3BQ9Y2G0 817 aa13.42□□□□□ -0.26
CAPN1-215ENST00000528396 TP53BP1Q12888 1972 aaPredicted RBP13.41□□□□□ -0.26
CAPN1-215ENST00000528396 A0A0J9YYE9 177 aa13.41□□□□□ -0.26
CAPN1-215ENST00000528396 A0A0U1RQJ8 604 aa13.41□□□□□ -0.26
CAPN1-215ENST00000528396 NEMP2A6NFY4 417 aa13.41□□□□□ -0.26
CAPN1-215ENST00000528396 CACNB4O00305 520 aaPredicted RBP13.41□□□□□ -0.26
CAPN1-215ENST00000528396 ZNF189O75820 626 aaPredicted RBP13.41□□□□□ -0.26
CAPN1-215ENST00000528396 HEXIM1O94992 359 aaKnown RBP13.41□□□□□ -0.26
CAPN1-215ENST00000528396 TRBC1P01850 177 aa13.41□□□□□ -0.26
CAPN1-215ENST00000528396 PDHA1P08559 390 aa13.41□□□□□ -0.26
CAPN1-215ENST00000528396 PYGMP11217 842 aa13.41□□□□□ -0.26
CAPN1-215ENST00000528396 PTPN3P26045 913 aa13.41□□□□□ -0.26
CAPN1-215ENST00000528396 HNF1BP35680 557 aa13.41□□□□□ -0.26
CAPN1-215ENST00000528396 PEX5P50542 639 aa13.41□□□□□ -0.26
CAPN1-215ENST00000528396 EIF3EP60228 445 aaKnown RBP13.41□□□□□ -0.26
CAPN1-215ENST00000528396 PFN3P60673 137 aa13.41□□□□□ -0.26
CAPN1-215ENST00000528396 OTUD4Q01804 1114 aaKnown RBP13.41□□□□□ -0.26
CAPN1-215ENST00000528396 ADCY2Q08462 1091 aa13.41□□□□□ -0.26
CAPN1-215ENST00000528396 FOXC1Q12948 553 aa13.41□□□□□ -0.26
CAPN1-215ENST00000528396 BNIP3Q12983 259 aa13.41□□□□□ -0.26
CAPN1-215ENST00000528396 ZNF211Q13398 564 aaPredicted RBP13.41□□□□□ -0.26
CAPN1-215ENST00000528396 XRCC4Q13426 336 aa13.41□□□□□ -0.26
CAPN1-215ENST00000528396 MTM1Q13496 603 aa13.41□□□□□ -0.26
CAPN1-215ENST00000528396 FZD2Q14332 565 aa13.41□□□□□ -0.26
CAPN1-215ENST00000528396 AGERQ15109 404 aa13.41□□□□□ -0.26
CAPN1-215ENST00000528396 CNGA3Q16281 694 aa13.41□□□□□ -0.26
CAPN1-215ENST00000528396 PCSK7Q16549 785 aa13.41□□□□□ -0.26
CAPN1-215ENST00000528396 TEX44Q53QW1 395 aa13.41□□□□□ -0.26
CAPN1-215ENST00000528396 DARS2Q6PI48 645 aaKnown RBP13.41□□□□□ -0.26
CAPN1-215ENST00000528396 KDELC2Q7Z4H8 507 aa13.41□□□□□ -0.26
CAPN1-215ENST00000528396 CNTD1Q8N815 330 aa13.41□□□□□ -0.26
CAPN1-215ENST00000528396 ACTL9Q8TC94 416 aa13.41□□□□□ -0.26
CAPN1-215ENST00000528396 BTN2A2Q8WVV5 523 aa13.41□□□□□ -0.26
CAPN1-215ENST00000528396 PIH1D2Q8WWB5 315 aa13.41□□□□□ -0.26
CAPN1-215ENST00000528396 MCCC1Q96RQ3 725 aaPredicted RBP13.41□□□□□ -0.26
CAPN1-215ENST00000528396 VAT1Q99536 393 aa13.41□□□□□ -0.26
CAPN1-215ENST00000528396 GLOD4Q9HC38 313 aa13.41□□□□□ -0.26
CAPN1-215ENST00000528396 OR1A2Q9Y585 309 aa13.41□□□□□ -0.26
CAPN1-215ENST00000528396 CAPN6Q9Y6Q1 641 aa13.41□□□□□ -0.26
CAPN1-215ENST00000528396 PCNX2A6NKB5 2137 aa13.4□□□□□ -0.26
CAPN1-215ENST00000528396 CAPN8A6NHC0 703 aa13.4□□□□□ -0.26
CAPN1-215ENST00000528396 NPIPB15A6NHN6 443 aaPredicted RBP13.4□□□□□ -0.26
CAPN1-215ENST00000528396 PSMD11O00231 422 aa13.4□□□□□ -0.26
CAPN1-215ENST00000528396 PDE2AO00408 941 aaPredicted RBP13.4□□□□□ -0.26
CAPN1-215ENST00000528396 FFAR2O15552 330 aa13.4□□□□□ -0.26
CAPN1-215ENST00000528396 TNFSF14O43557 240 aa13.4□□□□□ -0.26
CAPN1-215ENST00000528396 LDOC1O95751 146 aaPredicted RBP13.4□□□□□ -0.26
CAPN1-215ENST00000528396 CSF2P04141 144 aa13.4□□□□□ -0.26
CAPN1-215ENST00000528396 ZNF30P17039 623 aa13.4□□□□□ -0.26
CAPN1-215ENST00000528396 JUNDP17535 347 aa13.4□□□□□ -0.26
CAPN1-215ENST00000528396 KELP23276 732 aa13.4□□□□□ -0.26
CAPN1-215ENST00000528396 ETV3P41162 512 aa13.4□□□□□ -0.26
CAPN1-215ENST00000528396 BLKP51451 505 aa13.4□□□□□ -0.26
CAPN1-215ENST00000528396 SKOR1P84550 965 aa13.4□□□□□ -0.26
CAPN1-215ENST00000528396 NOMO1Q15155 1222 aa13.4□□□□□ -0.26
CAPN1-215ENST00000528396 SHBQ15464 509 aa13.4□□□□□ -0.26
CAPN1-215ENST00000528396 SEL1L2Q5TEA6 688 aa13.4□□□□□ -0.26
CAPN1-215ENST00000528396 FAXCQ5TGI0 409 aa13.4□□□□□ -0.26
CAPN1-215ENST00000528396 LRRC66Q68CR7 880 aa13.4□□□□□ -0.26
CAPN1-215ENST00000528396 KDM7AQ6ZMT4 941 aa13.4□□□□□ -0.26
CAPN1-215ENST00000528396 MACC1Q6ZN28 852 aa13.4□□□□□ -0.26
CAPN1-215ENST00000528396 DBX2Q6ZNG2 339 aa13.4□□□□□ -0.26
CAPN1-215ENST00000528396 PID1Q7Z2X4 250 aa13.4□□□□□ -0.26
CAPN1-215ENST00000528396 TTC13Q8NBP0 860 aa13.4□□□□□ -0.26
CAPN1-215ENST00000528396 CCHCR1Q8TD31 782 aa13.4□□□□□ -0.26
CAPN1-215ENST00000528396 UBE2Q2Q8WVN8 375 aa13.4□□□□□ -0.26
CAPN1-215ENST00000528396 IMP4Q96G21 291 aaKnown RBP13.4□□□□□ -0.26
CAPN1-215ENST00000528396 CNDP2Q96KP4 475 aaKnown RBP13.4□□□□□ -0.26
CAPN1-215ENST00000528396 TEKT5Q96M29 485 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms