RNA–Protein interactions for RNA: ENST00000527916.1

CPSF1-203, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-203ENST00000527916 STMND1H3BQB6 276 aa10.61□□□□□ -0.71
CPSF1-203ENST00000527916 DDX3XO00571 662 aaKnown RBP eCLIP10.61□□□□□ -0.71
CPSF1-203ENST00000527916 TOR1BO14657 336 aa10.61□□□□□ -0.71
CPSF1-203ENST00000527916 BUB1O43683 1085 aa10.61□□□□□ -0.71
CPSF1-203ENST00000527916 CREB3O43889 395 aa10.61□□□□□ -0.71
CPSF1-203ENST00000527916 SERPINC1P01008 464 aa10.61□□□□□ -0.71
CPSF1-203ENST00000527916 MYBL1P10243 752 aa10.61□□□□□ -0.71
CPSF1-203ENST00000527916 CTSEP14091 401 aa10.61□□□□□ -0.71
CPSF1-203ENST00000527916 WT1P19544 449 aaPredicted RBP10.61□□□□□ -0.71
CPSF1-203ENST00000527916 ITIH1P19827 911 aa10.61□□□□□ -0.71
CPSF1-203ENST00000527916 PSMA2P25787 234 aa10.61□□□□□ -0.71
CPSF1-203ENST00000527916 HCAR3P49019 387 aa10.61□□□□□ -0.71
CPSF1-203ENST00000527916 ATP1A2P50993 1020 aa10.61□□□□□ -0.71
CPSF1-203ENST00000527916 ZNF135P52742 658 aaPredicted RBP10.61□□□□□ -0.71
CPSF1-203ENST00000527916 MAPK10P53779 464 aa10.61□□□□□ -0.71
CPSF1-203ENST00000527916 TPM4P67936 248 aa10.61□□□□□ -0.71
CPSF1-203ENST00000527916 KLHL30Q0D2K2 578 aa10.61□□□□□ -0.71
CPSF1-203ENST00000527916 ERMARDQ5T6L9 678 aa10.61□□□□□ -0.71
CPSF1-203ENST00000527916 GDPD4Q6W3E5 623 aa10.61□□□□□ -0.71
CPSF1-203ENST00000527916 MACC1Q6ZN28 852 aa10.61□□□□□ -0.71
CPSF1-203ENST00000527916 ATCAYQ86WG3 371 aa10.61□□□□□ -0.71
CPSF1-203ENST00000527916 ARFGAP1Q8N6T3 406 aa10.61□□□□□ -0.71
CPSF1-203ENST00000527916 IQCDQ96DY2 449 aa10.61□□□□□ -0.71
CPSF1-203ENST00000527916 TRIM11Q96F44 468 aa10.61□□□□□ -0.71
CPSF1-203ENST00000527916 TM6SF2Q9BZW4 377 aa10.61□□□□□ -0.71
CPSF1-203ENST00000527916 CLPBQ9H078 707 aa10.61□□□□□ -0.71
CPSF1-203ENST00000527916 ZDHHC6Q9H6R6 413 aa10.61□□□□□ -0.71
CPSF1-203ENST00000527916 LRRC19Q9H756 370 aa10.61□□□□□ -0.71
CPSF1-203ENST00000527916 MRPL47Q9HD33 250 aaKnown RBP10.61□□□□□ -0.71
CPSF1-203ENST00000527916 RABGEF1Q9UJ41 708 aa10.61□□□□□ -0.71
CPSF1-203ENST00000527916 GPR34Q9UPC5 381 aa10.61□□□□□ -0.71
CPSF1-203ENST00000527916 BZW2Q9Y6E2 419 aaKnown RBP10.61□□□□□ -0.71
CPSF1-203ENST00000527916 ABCA12Q86UK0 2595 aa10.61□□□□□ -0.71
CPSF1-203ENST00000527916 ANKRD17O75179 2603 aaKnown RBP10.6□□□□□ -0.71
CPSF1-203ENST00000527916 CRYBG3Q68DQ2 2970 aa10.6□□□□□ -0.71
CPSF1-203ENST00000527916 TMCO5BA8MYB1 307 aa10.6□□□□□ -0.71
CPSF1-203ENST00000527916 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.6□□□□□ -0.71
CPSF1-203ENST00000527916 RASA4BC9J798 803 aa10.6□□□□□ -0.71
CPSF1-203ENST00000527916 KRIT1O00522 736 aa10.6□□□□□ -0.71
CPSF1-203ENST00000527916 AREL1O15033 823 aa10.6□□□□□ -0.71
CPSF1-203ENST00000527916 RASA4O43374 803 aa10.6□□□□□ -0.71
CPSF1-203ENST00000527916 TMCC1O94876 653 aa10.6□□□□□ -0.71
CPSF1-203ENST00000527916 PTMSP20962 102 aa10.6□□□□□ -0.71
CPSF1-203ENST00000527916 PCK1P35558 622 aa10.6□□□□□ -0.71
CPSF1-203ENST00000527916 PBX1P40424 430 aa10.6□□□□□ -0.71
CPSF1-203ENST00000527916 SUOXP51687 545 aa10.6□□□□□ -0.71
CPSF1-203ENST00000527916 TPI1P60174 286 aa10.6□□□□□ -0.71
CPSF1-203ENST00000527916 ZFP36L1Q07352 338 aaKnown RBP10.6□□□□□ -0.71
CPSF1-203ENST00000527916 GRM3Q14832 879 aa10.6□□□□□ -0.71
CPSF1-203ENST00000527916 E4F1Q66K89 784 aaPredicted RBP10.6□□□□□ -0.71
CPSF1-203ENST00000527916 PARS2Q7L3T8 475 aaKnown RBP10.6□□□□□ -0.71
CPSF1-203ENST00000527916 VPS36Q86VN1 386 aa10.6□□□□□ -0.71
CPSF1-203ENST00000527916 GKN2Q86XP6 184 aa10.6□□□□□ -0.71
CPSF1-203ENST00000527916 CCNJLQ8IV13 435 aa10.6□□□□□ -0.71
CPSF1-203ENST00000527916 RYBPQ8N488 228 aaPredicted RBP10.6□□□□□ -0.71
CPSF1-203ENST00000527916 PCDH19Q8TAB3 1148 aa10.6□□□□□ -0.71
CPSF1-203ENST00000527916 C9orf43Q8TAL5 461 aaPredicted RBP10.6□□□□□ -0.71
CPSF1-203ENST00000527916 GPBAR1Q8TDU6 330 aa10.6□□□□□ -0.71
CPSF1-203ENST00000527916 CENPTQ96BT3 561 aa10.6□□□□□ -0.71
CPSF1-203ENST00000527916 HMCESQ96FZ2 354 aa10.6□□□□□ -0.71
CPSF1-203ENST00000527916 GDAP1L1Q96MZ0 367 aa10.6□□□□□ -0.71
CPSF1-203ENST00000527916 KLHL32Q96NJ5 620 aa10.6□□□□□ -0.71
CPSF1-203ENST00000527916 CATSPER2Q96P56 530 aa10.6□□□□□ -0.71
CPSF1-203ENST00000527916 SLC12A9Q9BXP2 914 aa10.6□□□□□ -0.71
CPSF1-203ENST00000527916 KLC2Q9H0B6 622 aa10.6□□□□□ -0.71
CPSF1-203ENST00000527916 CBX8Q9HC52 389 aa10.6□□□□□ -0.71
CPSF1-203ENST00000527916 FOXJ2Q9P0K8 574 aa10.6□□□□□ -0.71
CPSF1-203ENST00000527916 DKK3Q9UBP4 350 aa10.6□□□□□ -0.71
CPSF1-203ENST00000527916 CNOT8Q9UFF9 292 aaKnown RBP10.6□□□□□ -0.71
CPSF1-203ENST00000527916 AP4E1Q9UPM8 1137 aa10.6□□□□□ -0.71
CPSF1-203ENST00000527916 SCINQ9Y6U3 715 aa10.6□□□□□ -0.71
CPSF1-203ENST00000527916 LRBAP50851 2863 aa10.59□□□□□ -0.71
CPSF1-203ENST00000527916 DOPEY1Q5JWR5 2465 aa10.59□□□□□ -0.71
CPSF1-203ENST00000527916 LRRK1Q38SD2 2015 aa10.59□□□□□ -0.71
CPSF1-203ENST00000527916 SYCE3A1L190 88 aa10.59□□□□□ -0.71
CPSF1-203ENST00000527916 TMEM110-MUSTN1A8MSY1 372 aa10.59□□□□□ -0.71
CPSF1-203ENST00000527916 C9orf172C9J069 976 aa10.59□□□□□ -0.71
CPSF1-203ENST00000527916 EEF2KO00418 725 aaKnown RBP10.59□□□□□ -0.71
CPSF1-203ENST00000527916 IGSF6O95976 241 aa10.59□□□□□ -0.71
CPSF1-203ENST00000527916 HTR1BP28222 390 aa10.59□□□□□ -0.71
CPSF1-203ENST00000527916 GKP32189 559 aa10.59□□□□□ -0.71
CPSF1-203ENST00000527916 EIF4A3P38919 411 aaKnown RBP10.59□□□□□ -0.71
CPSF1-203ENST00000527916 ABL2P42684 1182 aa10.59□□□□□ -0.71
CPSF1-203ENST00000527916 HK3P52790 923 aa10.59□□□□□ -0.71
CPSF1-203ENST00000527916 UBASH3AP57075 661 aa10.59□□□□□ -0.71
CPSF1-203ENST00000527916 RHOAP61586 193 aa10.59□□□□□ -0.71
CPSF1-203ENST00000527916 FANCCQ00597 558 aa10.59□□□□□ -0.71
CPSF1-203ENST00000527916 CYTH1Q15438 398 aa10.59□□□□□ -0.71
CPSF1-203ENST00000527916 PHF19Q5T6S3 580 aa10.59□□□□□ -0.71
CPSF1-203ENST00000527916 AFMIDQ63HM1 303 aa10.59□□□□□ -0.71
CPSF1-203ENST00000527916 CYP4V2Q6ZWL3 525 aaPredicted RBP10.59□□□□□ -0.71
CPSF1-203ENST00000527916 TTC7BQ86TV6 843 aa10.59□□□□□ -0.71
CPSF1-203ENST00000527916 ZNF354CQ86Y25 554 aa10.59□□□□□ -0.71
CPSF1-203ENST00000527916 DNAAF5Q86Y56 855 aa10.59□□□□□ -0.71
CPSF1-203ENST00000527916 HID1Q8IV36 788 aa10.59□□□□□ -0.71
CPSF1-203ENST00000527916 IL22RA1Q8N6P7 574 aa10.59□□□□□ -0.71
CPSF1-203ENST00000527916 Q8N9G6 341 aaPredicted RBP10.59□□□□□ -0.71
CPSF1-203ENST00000527916 OR6K2Q8NGY2 324 aa10.59□□□□□ -0.71
CPSF1-203ENST00000527916 SNRNP25Q9BV90 132 aaKnown RBP10.59□□□□□ -0.71
CPSF1-203ENST00000527916 DHX35Q9H5Z1 703 aaKnown RBP10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms