RNA–Protein interactions for RNA: ENST00000527644.1

TSPAN4-217, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 968 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-217ENST00000527644 ZNF548Q8NEK5 533 aaPredicted RBP26.43■■□□□ 1.82
TSPAN4-217ENST00000527644 TBATAQ96M53 351 aa26.43■■□□□ 1.82
TSPAN4-217ENST00000527644 COQ10AQ96MF6 247 aa26.43■■□□□ 1.82
TSPAN4-217ENST00000527644 DUSP23Q9BVJ7 150 aa26.43■■□□□ 1.82
TSPAN4-217ENST00000527644 RFPL3O75679 317 aa26.42■■□□□ 1.82
TSPAN4-217ENST00000527644 PDHA1P08559 390 aa26.42■■□□□ 1.82
TSPAN4-217ENST00000527644 ACADVLP49748 655 aa26.42■■□□□ 1.82
TSPAN4-217ENST00000527644 NIPAL4Q0D2K0 466 aa26.42■■□□□ 1.82
TSPAN4-217ENST00000527644 IHHQ14623 411 aa26.42■■□□□ 1.82
TSPAN4-217ENST00000527644 NFATC4Q14934 902 aa26.42■■□□□ 1.82
TSPAN4-217ENST00000527644 CNGA3Q16281 694 aa26.42■■□□□ 1.82
TSPAN4-217ENST00000527644 TFDP3Q5H9I0 405 aa26.42■■□□□ 1.82
TSPAN4-217ENST00000527644 CBARPQ8N350 705 aaPredicted RBP26.42■■□□□ 1.82
TSPAN4-217ENST00000527644 GALNT15Q8N3T1 639 aa26.42■■□□□ 1.82
TSPAN4-217ENST00000527644 ATL2Q8NHH9 583 aa26.42■■□□□ 1.82
TSPAN4-217ENST00000527644 TDRD1Q9BXT4 1180 aaKnown RBP26.42■■□□□ 1.82
TSPAN4-217ENST00000527644 SPASTQ9UBP0 616 aa26.42■■□□□ 1.82
TSPAN4-217ENST00000527644 OR1A2Q9Y585 309 aa26.42■■□□□ 1.82
TSPAN4-217ENST00000527644 SPEGQ15772 3267 aa26.42■■□□□ 1.82
TSPAN4-217ENST00000527644 PSMD11O00231 422 aa26.41■■□□□ 1.82
TSPAN4-217ENST00000527644 AQP9O43315 295 aa26.41■■□□□ 1.82
TSPAN4-217ENST00000527644 CST8O60676 142 aa26.41■■□□□ 1.82
TSPAN4-217ENST00000527644 VAV2P52735 878 aa26.41■■□□□ 1.82
TSPAN4-217ENST00000527644 NAP1L1P55209 391 aaKnown RBP26.41■■□□□ 1.82
TSPAN4-217ENST00000527644 PPARDQ03181 441 aa26.41■■□□□ 1.82
TSPAN4-217ENST00000527644 ILKQ13418 452 aa26.41■■□□□ 1.82
TSPAN4-217ENST00000527644 ARHGEF7Q14155 803 aa26.41■■□□□ 1.82
TSPAN4-217ENST00000527644 UNQ6494/PRO21346Q6UXR6 183 aa26.41■■□□□ 1.82
TSPAN4-217ENST00000527644 TMEM139Q8IV31 216 aa26.41■■□□□ 1.82
TSPAN4-217ENST00000527644 PHACTR4Q8IZ21 702 aa26.41■■□□□ 1.82
TSPAN4-217ENST00000527644 CNTD1Q8N815 330 aa26.41■■□□□ 1.82
TSPAN4-217ENST00000527644 SPC24Q8NBT2 197 aa26.41■■□□□ 1.82
TSPAN4-217ENST00000527644 PLA2G15Q8NCC3 412 aa26.41■■□□□ 1.82
TSPAN4-217ENST00000527644 ACRBPQ8NEB7 543 aa26.41■■□□□ 1.82
TSPAN4-217ENST00000527644 EXD1Q8NHP7 514 aa26.41■■□□□ 1.82
TSPAN4-217ENST00000527644 GATA6Q92908 595 aa26.41■■□□□ 1.82
TSPAN4-217ENST00000527644 RBM41Q96IZ5 413 aaKnown RBP26.41■■□□□ 1.82
TSPAN4-217ENST00000527644 TMEM121BQ9BXQ6 578 aaPredicted RBP26.41■■□□□ 1.82
TSPAN4-217ENST00000527644 SLC13A1Q9BZW2 595 aa26.41■■□□□ 1.82
TSPAN4-217ENST00000527644 APOBEC3BQ9UH17 382 aaKnown RBP26.41■■□□□ 1.82
TSPAN4-217ENST00000527644 PNMA8BQ9ULN7 279 aaPredicted RBP26.41■■□□□ 1.82
TSPAN4-217ENST00000527644 DUSP10Q9Y6W6 482 aa26.41■■□□□ 1.82
TSPAN4-217ENST00000527644 NPIPB15A6NHN6 443 aaPredicted RBP26.4■■□□□ 1.82
TSPAN4-217ENST00000527644 K7ESM1 405 aa26.4■■□□□ 1.82
TSPAN4-217ENST00000527644 PJA2O43164 708 aa26.4■■□□□ 1.82
TSPAN4-217ENST00000527644 TGM2P21980 687 aa26.4■■□□□ 1.82
TSPAN4-217ENST00000527644 LHCGRP22888 699 aa26.4■■□□□ 1.82
TSPAN4-217ENST00000527644 ACP1P24666 158 aa26.4■■□□□ 1.82
TSPAN4-217ENST00000527644 TRIM23P36406 574 aa26.4■■□□□ 1.82
TSPAN4-217ENST00000527644 BLKP51451 505 aa26.4■■□□□ 1.82
TSPAN4-217ENST00000527644 EPHB1P54762 984 aa26.4■■□□□ 1.82
TSPAN4-217ENST00000527644 RPL26P61254 145 aaKnown RBP26.4■■□□□ 1.82
TSPAN4-217ENST00000527644 ZBTB17Q13105 803 aa26.4■■□□□ 1.82
TSPAN4-217ENST00000527644 SMAD1Q15797 465 aaKnown RBP26.4■■□□□ 1.82
TSPAN4-217ENST00000527644 FAXCQ5TGI0 409 aa26.4■■□□□ 1.82
TSPAN4-217ENST00000527644 KAZNQ674X7 775 aa26.4■■□□□ 1.82
TSPAN4-217ENST00000527644 ESRP1Q6NXG1 681 aaKnown RBP26.4■■□□□ 1.82
TSPAN4-217ENST00000527644 ENPP7Q6UWV6 458 aa26.4■■□□□ 1.82
TSPAN4-217ENST00000527644 DHRS13Q6UX07 377 aa26.4■■□□□ 1.82
TSPAN4-217ENST00000527644 CCNI2Q6ZMN8 369 aaPredicted RBP26.4■■□□□ 1.82
TSPAN4-217ENST00000527644 FAM181AQ8N9Y4 354 aa26.4■■□□□ 1.82
TSPAN4-217ENST00000527644 LMX1AQ8TE12 382 aa26.4■■□□□ 1.82
TSPAN4-217ENST00000527644 LACRTQ9GZZ8 138 aa26.4■■□□□ 1.82
TSPAN4-217ENST00000527644 RPL26L1Q9UNX3 145 aaKnown RBP26.4■■□□□ 1.82
TSPAN4-217ENST00000527644 CHKBQ9Y259 395 aa26.4■■□□□ 1.82
TSPAN4-217ENST00000527644 EPG5Q9HCE0 2579 aa26.4■■□□□ 1.82
TSPAN4-217ENST00000527644 A0A0J9YYE9 177 aa26.39■■□□□ 1.82
TSPAN4-217ENST00000527644 C1QTNF9BB2RNN3 333 aa26.39■■□□□ 1.82
TSPAN4-217ENST00000527644 TRBC1P01850 177 aa26.39■■□□□ 1.82
TSPAN4-217ENST00000527644 HOXC4P09017 264 aaPredicted RBP26.39■■□□□ 1.82
TSPAN4-217ENST00000527644 C1QTNF9P0C862 333 aa26.39■■□□□ 1.82
TSPAN4-217ENST00000527644 CTPS1P17812 591 aa26.39■■□□□ 1.82
TSPAN4-217ENST00000527644 HNF1BP35680 557 aa26.39■■□□□ 1.82
TSPAN4-217ENST00000527644 MARCKSL1P49006 195 aa26.39■■□□□ 1.82
TSPAN4-217ENST00000527644 DAB2P98082 770 aa26.39■■□□□ 1.82
TSPAN4-217ENST00000527644 DENND2CQ68D51 928 aa26.39■■□□□ 1.82
TSPAN4-217ENST00000527644 PNCKQ6P2M8 343 aa26.39■■□□□ 1.82
TSPAN4-217ENST00000527644 RBFAQ8N0V3 343 aa26.39■■□□□ 1.82
TSPAN4-217ENST00000527644 KRT35Q92764 455 aa26.39■■□□□ 1.82
TSPAN4-217ENST00000527644 NUS1Q96E22 293 aa26.39■■□□□ 1.82
TSPAN4-217ENST00000527644 TCEAL2Q9H3H9 227 aaPredicted RBP26.39■■□□□ 1.82
TSPAN4-217ENST00000527644 PCDH9Q9HC56 1237 aa26.39■■□□□ 1.82
TSPAN4-217ENST00000527644 MAP1BP46821 2468 aaKnown RBP26.39■■□□□ 1.81
TSPAN4-217ENST00000527644 AKAP13Q12802 2813 aa26.38■■□□□ 1.81
TSPAN4-217ENST00000527644 hCG_1818297A0A087WSY0 165 aa26.38■■□□□ 1.81
TSPAN4-217ENST00000527644 GOLGA6L6A8MZA4 724 aa26.38■■□□□ 1.81
TSPAN4-217ENST00000527644 CACNB4O00305 520 aaPredicted RBP26.38■■□□□ 1.81
TSPAN4-217ENST00000527644 TPP1O14773 563 aa26.38■■□□□ 1.81
TSPAN4-217ENST00000527644 PRLP01236 227 aa26.38■■□□□ 1.81
TSPAN4-217ENST00000527644 PROS1P07225 676 aa26.38■■□□□ 1.81
TSPAN4-217ENST00000527644 ALPIP09923 528 aa26.38■■□□□ 1.81
TSPAN4-217ENST00000527644 HK3P52790 923 aa26.38■■□□□ 1.81
TSPAN4-217ENST00000527644 KIAA1024LP59773 190 aa26.38■■□□□ 1.81
TSPAN4-217ENST00000527644 LLGL1Q15334 1064 aa26.38■■□□□ 1.81
TSPAN4-217ENST00000527644 PRRT3Q5FWE3 981 aa26.38■■□□□ 1.81
TSPAN4-217ENST00000527644 HSD11B1LQ7Z5J1 315 aa26.38■■□□□ 1.81
TSPAN4-217ENST00000527644 KIAA1328Q86T90 577 aa26.38■■□□□ 1.81
TSPAN4-217ENST00000527644 TSPAN33Q86UF1 283 aa26.38■■□□□ 1.81
TSPAN4-217ENST00000527644 CCDC50Q8IVM0 306 aa26.38■■□□□ 1.81
TSPAN4-217ENST00000527644 TXLNBQ8N3L3 684 aa26.38■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms