RNA–Protein interactions for RNA: ENST00000527299.1

CLNS1A-209, Transcript of chloride nucleotide-sensitive channel 1A, human

TSL 2

Gene CLNS1A, Length 387 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLNS1A-209	ENST00000527299	GHITM	Q9H3K2	345 aa		3.76	□□□□□ -1.81
CLNS1A-209	ENST00000527299	VPS37B	Q9H9H4	285 aa		3.76	□□□□□ -1.81
CLNS1A-209	ENST00000527299	PCDH12	Q9NPG4	1184 aa		3.76	□□□□□ -1.81
CLNS1A-209	ENST00000527299	DDX18	Q9NVP1	670 aa	Known RBP	3.76	□□□□□ -1.81
CLNS1A-209	ENST00000527299	ASB6	Q9NWX5	421 aa		3.76	□□□□□ -1.81
CLNS1A-209	ENST00000527299	RRN3	Q9NYV6	651 aa		3.76	□□□□□ -1.81
CLNS1A-209	ENST00000527299	GPRC5D	Q9NZD1	345 aa		3.76	□□□□□ -1.81
CLNS1A-209	ENST00000527299	IGSF9	Q9P2J2	1179 aa		3.76	□□□□□ -1.81
CLNS1A-209	ENST00000527299	ANKMY1	Q9P2S6	941 aa		3.76	□□□□□ -1.81
CLNS1A-209	ENST00000527299	RNF14	Q9UBS8	474 aa		3.76	□□□□□ -1.81
CLNS1A-209	ENST00000527299	TEKT2	Q9UIF3	430 aa		3.76	□□□□□ -1.81
CLNS1A-209	ENST00000527299	CDH7	Q9ULB5	785 aa		3.76	□□□□□ -1.81
CLNS1A-209	ENST00000527299	ZBTB21	Q9ULJ3	1066 aa		3.76	□□□□□ -1.81
CLNS1A-209	ENST00000527299	VPS4A	Q9UN37	437 aa		3.76	□□□□□ -1.81
CLNS1A-209	ENST00000527299	DTX4	Q9Y2E6	619 aa		3.76	□□□□□ -1.81
CLNS1A-209	ENST00000527299	MAD1L1	Q9Y6D9	718 aa		3.76	□□□□□ -1.81
CLNS1A-209	ENST00000527299	DNMT1	P26358	1616 aa	Known RBP	3.76	□□□□□ -1.81
CLNS1A-209	ENST00000527299	ABCA9	Q8IUA7	1624 aa		3.76	□□□□□ -1.81
CLNS1A-209	ENST00000527299	TRO	Q12816	1431 aa	Predicted RBP	3.76	□□□□□ -1.81
CLNS1A-209	ENST00000527299	N4BP2	Q86UW6	1770 aa	Predicted RBP	3.76	□□□□□ -1.81
CLNS1A-209	ENST00000527299	UGGT1	Q9NYU2	1555 aa		3.76	□□□□□ -1.81
CLNS1A-209	ENST00000527299	DISP3	Q9P2K9	1392 aa		3.76	□□□□□ -1.81
CLNS1A-209	ENST00000527299	ARHGEF40	Q8TER5	1519 aa		3.75	□□□□□ -1.81
CLNS1A-209	ENST00000527299	ARAP3	Q8WWN8	1544 aa		3.75	□□□□□ -1.81
CLNS1A-209	ENST00000527299	DUOX2	Q9NRD8	1548 aa		3.75	□□□□□ -1.81
CLNS1A-209	ENST00000527299	ZMYM6	O95789	1325 aa		3.75	□□□□□ -1.81
CLNS1A-209	ENST00000527299	FLT1	P17948	1338 aa		3.75	□□□□□ -1.81
CLNS1A-209	ENST00000527299	NEDD4	P46934	1319 aa		3.75	□□□□□ -1.81
CLNS1A-209	ENST00000527299	AOX1	Q06278	1338 aa		3.75	□□□□□ -1.81
CLNS1A-209	ENST00000527299	PREX1	Q8TCU6	1659 aa		3.75	□□□□□ -1.81
CLNS1A-209	ENST00000527299	ERVK-7	P63135	1459 aa		3.75	□□□□□ -1.81
CLNS1A-209	ENST00000527299	MLH3	Q9UHC1	1453 aa		3.75	□□□□□ -1.81
CLNS1A-209	ENST00000527299	ABCA6	Q8N139	1617 aa		3.75	□□□□□ -1.81
CLNS1A-209	ENST00000527299	CYP3A7-CYP3A51P	A0A087WV96	503 aa		3.75	□□□□□ -1.81
CLNS1A-209	ENST00000527299	CAPN8	A6NHC0	703 aa		3.75	□□□□□ -1.81
CLNS1A-209	ENST00000527299	PRRT4	C9JH25	899 aa		3.75	□□□□□ -1.81
CLNS1A-209	ENST00000527299	PRSS44	E7EML9	344 aa		3.75	□□□□□ -1.81
CLNS1A-209	ENST00000527299		F8W8V4	182 aa		3.75	□□□□□ -1.81
CLNS1A-209	ENST00000527299	hCG_2039718	K7EN88	272 aa		3.75	□□□□□ -1.81
CLNS1A-209	ENST00000527299	RNF103	O00237	685 aa		3.75	□□□□□ -1.81
CLNS1A-209	ENST00000527299	CCRL2	O00421	344 aa		3.75	□□□□□ -1.81
CLNS1A-209	ENST00000527299	RTCA	O00442	366 aa	Known RBP	3.75	□□□□□ -1.81
CLNS1A-209	ENST00000527299	PJA2	O43164	708 aa		3.75	□□□□□ -1.81
CLNS1A-209	ENST00000527299	HOXC11	O43248	304 aa	Predicted RBP	3.75	□□□□□ -1.81
CLNS1A-209	ENST00000527299	PDE8A	O60658	829 aa		3.75	□□□□□ -1.81
CLNS1A-209	ENST00000527299	DCTN3	O75935	186 aa		3.75	□□□□□ -1.81
CLNS1A-209	ENST00000527299	USP1	O94782	785 aa		3.75	□□□□□ -1.81
CLNS1A-209	ENST00000527299	SLITRK3	O94933	977 aa		3.75	□□□□□ -1.81
CLNS1A-209	ENST00000527299	SNX4	O95219	450 aa		3.75	□□□□□ -1.81
CLNS1A-209	ENST00000527299	BAG2	O95816	211 aa		3.75	□□□□□ -1.81
CLNS1A-209	ENST00000527299	SLC4A1	P02730	911 aa		3.75	□□□□□ -1.81
CLNS1A-209	ENST00000527299	A1BG	P04217	495 aa		3.75	□□□□□ -1.81
CLNS1A-209	ENST00000527299	ATP1A1	P05023	1023 aa	Known RBP	3.75	□□□□□ -1.81
CLNS1A-209	ENST00000527299	TFAP2A	P05549	437 aa		3.75	□□□□□ -1.81
CLNS1A-209	ENST00000527299	SLC3A2	P08195	630 aa	Known RBP	3.75	□□□□□ -1.81
CLNS1A-209	ENST00000527299	CYP3A4	P08684	503 aa		3.75	□□□□□ -1.81
CLNS1A-209	ENST00000527299	ATP1A3	P13637	1013 aa		3.75	□□□□□ -1.81
CLNS1A-209	ENST00000527299	GFAP	P14136	432 aa		3.75	□□□□□ -1.81
CLNS1A-209	ENST00000527299	SELL	P14151	372 aa		3.75	□□□□□ -1.81
CLNS1A-209	ENST00000527299	POU2F1	P14859	743 aa		3.75	□□□□□ -1.81
CLNS1A-209	ENST00000527299	UQCRB	P14927	111 aa		3.75	□□□□□ -1.81
CLNS1A-209	ENST00000527299	GAP43	P17677	238 aa		3.75	□□□□□ -1.81
CLNS1A-209	ENST00000527299	TCP1	P17987	556 aa	Known RBP	3.75	□□□□□ -1.81
CLNS1A-209	ENST00000527299	JAK1	P23458	1154 aa		3.75	□□□□□ -1.81
CLNS1A-209	ENST00000527299	CYP3A7	P24462	503 aa		3.75	□□□□□ -1.81
CLNS1A-209	ENST00000527299	MARK3	P27448	753 aa		3.75	□□□□□ -1.81
CLNS1A-209	ENST00000527299	TYK2	P29597	1187 aa		3.75	□□□□□ -1.81
CLNS1A-209	ENST00000527299	RRM2	P31350	389 aa		3.75	□□□□□ -1.81
CLNS1A-209	ENST00000527299	TALDO1	P37837	337 aa		3.75	□□□□□ -1.81
CLNS1A-209	ENST00000527299	PHKA1	P46020	1223 aa		3.75	□□□□□ -1.81
CLNS1A-209	ENST00000527299	PIP4K2A	P48426	406 aa	Predicted RBP	3.75	□□□□□ -1.81
CLNS1A-209	ENST00000527299	MASP1	P48740	699 aa		3.75	□□□□□ -1.81
CLNS1A-209	ENST00000527299	HCAR3	P49019	387 aa		3.75	□□□□□ -1.81
CLNS1A-209	ENST00000527299	ENTPD1	P49961	510 aa		3.75	□□□□□ -1.81
CLNS1A-209	ENST00000527299	SLC26A2	P50443	739 aa		3.75	□□□□□ -1.81
CLNS1A-209	ENST00000527299	NR1H2	P55055	460 aa		3.75	□□□□□ -1.81
CLNS1A-209	ENST00000527299	ADK	P55263	362 aa	Known RBP	3.75	□□□□□ -1.81
CLNS1A-209	ENST00000527299	AP1S2	P56377	157 aa		3.75	□□□□□ -1.81
CLNS1A-209	ENST00000527299	C21orf59	P57076	290 aa		3.75	□□□□□ -1.81
CLNS1A-209	ENST00000527299	CDR2	Q01850	454 aa		3.75	□□□□□ -1.81
CLNS1A-209	ENST00000527299	ROR1	Q01973	937 aa		3.75	□□□□□ -1.81
CLNS1A-209	ENST00000527299	GHRHR	Q02643	423 aa		3.75	□□□□□ -1.81
CLNS1A-209	ENST00000527299	FOLH1	Q04609	750 aa		3.75	□□□□□ -1.81
CLNS1A-209	ENST00000527299	GFPT1	Q06210	699 aa	Predicted RBP	3.75	□□□□□ -1.81
CLNS1A-209	ENST00000527299	LGALS3BP	Q08380	585 aa		3.75	□□□□□ -1.81
CLNS1A-209	ENST00000527299	ZNF844	Q08AG5	666 aa		3.75	□□□□□ -1.81
CLNS1A-209	ENST00000527299	C2orf54	Q08AI8	447 aa		3.75	□□□□□ -1.81
CLNS1A-209	ENST00000527299	SELENBP1	Q13228	472 aa		3.75	□□□□□ -1.81
CLNS1A-209	ENST00000527299	STX3	Q13277	289 aa		3.75	□□□□□ -1.81
CLNS1A-209	ENST00000527299	MED21	Q13503	144 aa		3.75	□□□□□ -1.81
CLNS1A-209	ENST00000527299	SERINC3	Q13530	473 aa		3.75	□□□□□ -1.81
CLNS1A-209	ENST00000527299	APOF	Q13790	326 aa		3.75	□□□□□ -1.81
CLNS1A-209	ENST00000527299	KRT81	Q14533	505 aa		3.75	□□□□□ -1.81
CLNS1A-209	ENST00000527299	RFTN1	Q14699	578 aa	Predicted RBP	3.75	□□□□□ -1.81
CLNS1A-209	ENST00000527299	OASL	Q15646	514 aa	Known RBP	3.75	□□□□□ -1.81
CLNS1A-209	ENST00000527299	ADCK5	Q3MIX3	580 aa		3.75	□□□□□ -1.81
CLNS1A-209	ENST00000527299	INO80D	Q53TQ3	878 aa	Predicted RBP	3.75	□□□□□ -1.81
CLNS1A-209	ENST00000527299	DCAF6	Q58WW2	860 aa		3.75	□□□□□ -1.81
CLNS1A-209	ENST00000527299	RILPL1	Q5EBL4	403 aa		3.75	□□□□□ -1.81
CLNS1A-209	ENST00000527299	TCHHL1	Q5QJ38	904 aa	Predicted RBP	3.75	□□□□□ -1.81

Retrieved 100 of 20,778 RNA–protein pairs in 48 ms