RNA–Protein interactions for RNA: ENST00000527275.5

SMPD1-203, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SMPD1, Length 2,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-203ENST00000527275 HLA-EP13747 358 aa18.87■□□□□ 0.61
SMPD1-203ENST00000527275 CCNHP51946 323 aaPredicted RBP18.87■□□□□ 0.61
SMPD1-203ENST00000527275 SF3A3Q12874 501 aaKnown RBP eCLIP18.87■□□□□ 0.61
SMPD1-203ENST00000527275 IFT88Q13099 833 aa18.87■□□□□ 0.61
SMPD1-203ENST00000527275 SMAD1Q15797 465 aaKnown RBP18.87■□□□□ 0.61
SMPD1-203ENST00000527275 SLC44A4Q53GD3 710 aa18.87■□□□□ 0.61
SMPD1-203ENST00000527275 RALGPS1Q5JS13 557 aa18.87■□□□□ 0.61
SMPD1-203ENST00000527275 DENND5AQ6IQ26 1287 aa18.87■□□□□ 0.61
SMPD1-203ENST00000527275 C6orf89Q6UWU4 347 aa18.87■□□□□ 0.61
SMPD1-203ENST00000527275 SERPINA13PQ6UXR4 307 aa18.87■□□□□ 0.61
SMPD1-203ENST00000527275 TIFABQ6ZNK6 161 aa18.87■□□□□ 0.61
SMPD1-203ENST00000527275 CAMK1DQ8IU85 385 aa18.87■□□□□ 0.61
SMPD1-203ENST00000527275 TMEM245Q9H330 911 aa18.87■□□□□ 0.61
SMPD1-203ENST00000527275 THAP10Q9P2Z0 257 aaPredicted RBP18.87■□□□□ 0.61
SMPD1-203ENST00000527275 DUSP12Q9UNI6 340 aa18.87■□□□□ 0.61
SMPD1-203ENST00000527275 A0A0C4DFX4 3053 aa18.87■□□□□ 0.61
SMPD1-203ENST00000527275 SHISA7A6NL88 538 aa18.86■□□□□ 0.61
SMPD1-203ENST00000527275 GSRP00390 522 aa18.86■□□□□ 0.61
SMPD1-203ENST00000527275 CD72P21854 359 aa18.86■□□□□ 0.61
SMPD1-203ENST00000527275 CDK18Q07002 472 aa18.86■□□□□ 0.61
SMPD1-203ENST00000527275 ZKSCAN8Q15776 578 aaPredicted RBP18.86■□□□□ 0.61
SMPD1-203ENST00000527275 MYLK3Q32MK0 819 aa18.86■□□□□ 0.61
SMPD1-203ENST00000527275 TMEM196Q5HYL7 178 aa18.86■□□□□ 0.61
SMPD1-203ENST00000527275 RGS9BPQ6ZS82 235 aa18.86■□□□□ 0.61
SMPD1-203ENST00000527275 KDM1BQ8NB78 822 aa18.86■□□□□ 0.61
SMPD1-203ENST00000527275 CHST14Q8NCH0 376 aa18.86■□□□□ 0.61
SMPD1-203ENST00000527275 KIFC1Q9BW19 673 aa18.86■□□□□ 0.61
SMPD1-203ENST00000527275 TDRD1Q9BXT4 1180 aaKnown RBP18.86■□□□□ 0.61
SMPD1-203ENST00000527275 CHKBQ9Y259 395 aa18.86■□□□□ 0.61
SMPD1-203ENST00000527275 RAI2Q9Y5P3 530 aa18.86■□□□□ 0.61
SMPD1-203ENST00000527275 PSAT1Q9Y617 370 aa18.86■□□□□ 0.61
SMPD1-203ENST00000527275 TCF20Q9UGU0 1960 aaKnown RBP18.86■□□□□ 0.61
SMPD1-203ENST00000527275 LOC285095A0A1B0GVY8 99 aa18.86■□□□□ 0.61
SMPD1-203ENST00000527275 SNX3O60493 162 aa18.86■□□□□ 0.61
SMPD1-203ENST00000527275 PIGNO95427 931 aa18.86■□□□□ 0.61
SMPD1-203ENST00000527275 EGFP01133 1207 aa18.86■□□□□ 0.61
SMPD1-203ENST00000527275 PDHA1P08559 390 aa18.86■□□□□ 0.61
SMPD1-203ENST00000527275 GLULP15104 373 aa18.86■□□□□ 0.61
SMPD1-203ENST00000527275 IL12RB1P42701 662 aa18.86■□□□□ 0.61
SMPD1-203ENST00000527275 RECQLP46063 649 aaPredicted RBP18.86■□□□□ 0.61
SMPD1-203ENST00000527275 TRAF2Q12933 501 aa18.86■□□□□ 0.61
SMPD1-203ENST00000527275 PCID2Q5JVF3 399 aa18.86■□□□□ 0.61
SMPD1-203ENST00000527275 FSTL4Q6MZW2 842 aa18.86■□□□□ 0.61
SMPD1-203ENST00000527275 SLC25A41Q8N5S1 370 aa18.86■□□□□ 0.61
SMPD1-203ENST00000527275 ANKS4BQ8N8V4 417 aa18.86■□□□□ 0.61
SMPD1-203ENST00000527275 LRRC8CQ8TDW0 803 aa18.86■□□□□ 0.61
SMPD1-203ENST00000527275 PDCD6IPQ8WUM4 868 aaKnown RBP18.86■□□□□ 0.61
SMPD1-203ENST00000527275 IFT43Q96FT9 208 aa18.86■□□□□ 0.61
SMPD1-203ENST00000527275 IQCGQ9H095 443 aaKnown RBP18.86■□□□□ 0.61
SMPD1-203ENST00000527275 CACNA2D2Q9NY47 1150 aa18.86■□□□□ 0.61
SMPD1-203ENST00000527275 TXNDC16Q9P2K2 825 aa18.86■□□□□ 0.61
SMPD1-203ENST00000527275 POP4O95707 220 aaKnown RBP18.85■□□□□ 0.61
SMPD1-203ENST00000527275 PRLP01236 227 aa18.85■□□□□ 0.61
SMPD1-203ENST00000527275 BMP1P13497 986 aa18.85■□□□□ 0.61
SMPD1-203ENST00000527275 CCNFP41002 786 aa18.85■□□□□ 0.61
SMPD1-203ENST00000527275 TNFRSF4P43489 277 aa18.85■□□□□ 0.61
SMPD1-203ENST00000527275 KIR2DL1P43626 348 aaPredicted RBP18.85■□□□□ 0.61
SMPD1-203ENST00000527275 MAPK8P45983 427 aa18.85■□□□□ 0.61
SMPD1-203ENST00000527275 SEC13P55735 322 aa18.85■□□□□ 0.61
SMPD1-203ENST00000527275 DNAJC3Q13217 504 aa18.85■□□□□ 0.61
SMPD1-203ENST00000527275 SLC14A2Q15849 920 aa18.85■□□□□ 0.61
SMPD1-203ENST00000527275 HNRNPA1L2Q32P51 320 aaKnown RBP18.85■□□□□ 0.61
SMPD1-203ENST00000527275 PLPP6Q8IY26 295 aa18.85■□□□□ 0.61
SMPD1-203ENST00000527275 CHPFQ8IZ52 775 aa18.85■□□□□ 0.61
SMPD1-203ENST00000527275 ZNF513Q8N8E2 541 aaPredicted RBP18.85■□□□□ 0.61
SMPD1-203ENST00000527275 FEM1CQ96JP0 617 aa18.85■□□□□ 0.61
SMPD1-203ENST00000527275 FAM111AQ96PZ2 611 aa18.85■□□□□ 0.61
SMPD1-203ENST00000527275 TRIB3Q96RU7 358 aa18.85■□□□□ 0.61
SMPD1-203ENST00000527275 SRPK1Q96SB4 655 aaKnown RBP18.85■□□□□ 0.61
SMPD1-203ENST00000527275 PITPNM3Q9BZ71 974 aa18.85■□□□□ 0.61
SMPD1-203ENST00000527275 SLC13A1Q9BZW2 595 aa18.85■□□□□ 0.61
SMPD1-203ENST00000527275 VPS11Q9H270 941 aa18.85■□□□□ 0.61
SMPD1-203ENST00000527275 SORCS3Q9UPU3 1222 aa18.85■□□□□ 0.61
SMPD1-203ENST00000527275 MUC22E2RYF6 1773 aaPredicted RBP18.85■□□□□ 0.61
SMPD1-203ENST00000527275 WDR91A4D1P6 747 aa18.85■□□□□ 0.61
SMPD1-203ENST00000527275 EPOP01588 193 aa18.85■□□□□ 0.61
SMPD1-203ENST00000527275 ALADP13716 330 aa18.85■□□□□ 0.61
SMPD1-203ENST00000527275 NMBRP28336 390 aa18.85■□□□□ 0.61
SMPD1-203ENST00000527275 GP5P40197 560 aa18.85■□□□□ 0.61
SMPD1-203ENST00000527275 ETV4P43268 484 aa18.85■□□□□ 0.61
SMPD1-203ENST00000527275 GRSF1Q12849 480 aaKnown RBP eCLIP18.85■□□□□ 0.61
SMPD1-203ENST00000527275 GALNT3Q14435 633 aa18.85■□□□□ 0.61
SMPD1-203ENST00000527275 SIRPB2Q5JXA9 342 aa18.85■□□□□ 0.61
SMPD1-203ENST00000527275 TPRG1Q6ZUI0 275 aa18.85■□□□□ 0.61
SMPD1-203ENST00000527275 SPOCK2Q92563 424 aa18.85■□□□□ 0.61
SMPD1-203ENST00000527275 ZNF75CPQ92670 426 aaPredicted RBP18.85■□□□□ 0.61
SMPD1-203ENST00000527275 CPNE1Q99829 537 aa18.85■□□□□ 0.61
SMPD1-203ENST00000527275 ZDHHC6Q9H6R6 413 aa18.85■□□□□ 0.61
SMPD1-203ENST00000527275 C20orf96Q9NUD7 363 aaPredicted RBP18.85■□□□□ 0.61
SMPD1-203ENST00000527275 RRP15Q9Y3B9 282 aaKnown RBP18.85■□□□□ 0.61
SMPD1-203ENST00000527275 C19orf67A6NJJ6 358 aa18.84■□□□□ 0.61
SMPD1-203ENST00000527275 ATXN1LP0C7T5 689 aaKnown RBP18.84■□□□□ 0.61
SMPD1-203ENST00000527275 TIE1P35590 1138 aa18.84■□□□□ 0.61
SMPD1-203ENST00000527275 BCL2L1Q07817 233 aa18.84■□□□□ 0.61
SMPD1-203ENST00000527275 ITIH4Q14624 930 aa18.84■□□□□ 0.61
SMPD1-203ENST00000527275 POU6F1Q14863 301 aa18.84■□□□□ 0.61
SMPD1-203ENST00000527275 C2orf27AQ580R0 203 aa18.84■□□□□ 0.61
SMPD1-203ENST00000527275 HSP90AA5PQ58FG0 334 aa18.84■□□□□ 0.61
SMPD1-203ENST00000527275 TEDDM1Q5T9Z0 273 aa18.84■□□□□ 0.61
SMPD1-203ENST00000527275 GRTP1Q5TC63 336 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms