RNA–Protein interactions for RNA: ENST00000526280.1

SMPD1-202, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,344 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-202ENST00000526280 RMDN1Q96DB5 314 aa12.97□□□□□ -0.33
SMPD1-202ENST00000526280 SLC6A18Q96N87 628 aa12.97□□□□□ -0.33
SMPD1-202ENST00000526280 LENG8Q96PV6 779 aaPredicted RBP12.97□□□□□ -0.33
SMPD1-202ENST00000526280 SMIM14Q96QK8 99 aa12.97□□□□□ -0.33
SMPD1-202ENST00000526280 LYSMD1Q96S90 227 aa12.97□□□□□ -0.33
SMPD1-202ENST00000526280 KLF6Q99612 283 aaPredicted RBP12.97□□□□□ -0.33
SMPD1-202ENST00000526280 HINFPQ9BQA5 517 aa12.97□□□□□ -0.33
SMPD1-202ENST00000526280 MLPHQ9BV36 600 aaPredicted RBP12.97□□□□□ -0.33
SMPD1-202ENST00000526280 SMOC1Q9H4F8 434 aa12.97□□□□□ -0.33
SMPD1-202ENST00000526280 PARD6AQ9NPB6 346 aa12.97□□□□□ -0.33
SMPD1-202ENST00000526280 SEMA4GQ9NTN9 838 aa12.97□□□□□ -0.33
SMPD1-202ENST00000526280 AAR2Q9Y312 384 aaKnown RBP12.97□□□□□ -0.33
SMPD1-202ENST00000526280 KNL1Q8NG31 2342 aa12.97□□□□□ -0.33
SMPD1-202ENST00000526280 LRRK1Q38SD2 2015 aa12.97□□□□□ -0.33
SMPD1-202ENST00000526280 PLXNA2O75051 1894 aa12.96□□□□□ -0.33
SMPD1-202ENST00000526280 CAPN8A6NHC0 703 aa12.96□□□□□ -0.33
SMPD1-202ENST00000526280 PATE3B3GLJ2 98 aa12.96□□□□□ -0.33
SMPD1-202ENST00000526280 KHNYNO15037 678 aaKnown RBP12.96□□□□□ -0.33
SMPD1-202ENST00000526280 RAD51BO15315 384 aa12.96□□□□□ -0.33
SMPD1-202ENST00000526280 HEXIM1O94992 359 aaKnown RBP12.96□□□□□ -0.33
SMPD1-202ENST00000526280 ATXN1LP0C7T5 689 aaKnown RBP12.96□□□□□ -0.33
SMPD1-202ENST00000526280 HNRNPA2B1P22626 353 aaKnown RBP12.96□□□□□ -0.33
SMPD1-202ENST00000526280 LHCGRP22888 699 aa12.96□□□□□ -0.33
SMPD1-202ENST00000526280 AFF3P51826 1226 aaKnown RBP12.96□□□□□ -0.33
SMPD1-202ENST00000526280 AGERQ15109 404 aa12.96□□□□□ -0.33
SMPD1-202ENST00000526280 CNGA3Q16281 694 aa12.96□□□□□ -0.33
SMPD1-202ENST00000526280 TRIM61Q5EBN2 209 aa12.96□□□□□ -0.33
SMPD1-202ENST00000526280 CCDC70Q6NSX1 233 aa12.96□□□□□ -0.33
SMPD1-202ENST00000526280 TTC27Q6P3X3 843 aa12.96□□□□□ -0.33
SMPD1-202ENST00000526280 CRTC1Q6UUV9 634 aa12.96□□□□□ -0.33
SMPD1-202ENST00000526280 TSPAN33Q86UF1 283 aa12.96□□□□□ -0.33
SMPD1-202ENST00000526280 CCDC89Q8N998 374 aa12.96□□□□□ -0.33
SMPD1-202ENST00000526280 GLIS1Q8NBF1 620 aa12.96□□□□□ -0.33
SMPD1-202ENST00000526280 IPMKQ8NFU5 416 aa12.96□□□□□ -0.33
SMPD1-202ENST00000526280 ATL2Q8NHH9 583 aa12.96□□□□□ -0.33
SMPD1-202ENST00000526280 CENPTQ96BT3 561 aa12.96□□□□□ -0.33
SMPD1-202ENST00000526280 CAPN10Q9HC96 672 aa12.96□□□□□ -0.33
SMPD1-202ENST00000526280 FZD3Q9NPG1 666 aa12.96□□□□□ -0.33
SMPD1-202ENST00000526280 RNF14Q9UBS8 474 aa12.96□□□□□ -0.33
SMPD1-202ENST00000526280 SLC6A14Q9UN76 642 aa12.96□□□□□ -0.33
SMPD1-202ENST00000526280 COQ6Q9Y2Z9 468 aa12.96□□□□□ -0.33
SMPD1-202ENST00000526280 HS3ST3A1Q9Y663 406 aa12.96□□□□□ -0.33
SMPD1-202ENST00000526280 LAMA1P25391 3075 aa12.96□□□□□ -0.34
SMPD1-202ENST00000526280 GOLGA6L10A0A0M3HER8 536 aa12.95□□□□□ -0.34
SMPD1-202ENST00000526280 A0A0U1RQS6 177 aa12.95□□□□□ -0.34
SMPD1-202ENST00000526280 A0A1W2PR77 199 aa12.95□□□□□ -0.34
SMPD1-202ENST00000526280 PSMD11O00231 422 aa12.95□□□□□ -0.34
SMPD1-202ENST00000526280 LZTS3O60299 673 aaPredicted RBP12.95□□□□□ -0.34
SMPD1-202ENST00000526280 AGTP01019 485 aa12.95□□□□□ -0.34
SMPD1-202ENST00000526280 CFIP05156 583 aa12.95□□□□□ -0.34
SMPD1-202ENST00000526280 ZSCAN5DPP0CG00 497 aa12.95□□□□□ -0.34
SMPD1-202ENST00000526280 ETS1P14921 441 aa12.95□□□□□ -0.34
SMPD1-202ENST00000526280 ZNF30P17039 623 aa12.95□□□□□ -0.34
SMPD1-202ENST00000526280 GM2AP17900 193 aa12.95□□□□□ -0.34
SMPD1-202ENST00000526280 CD38P28907 300 aa12.95□□□□□ -0.34
SMPD1-202ENST00000526280 AKT2P31751 481 aa12.95□□□□□ -0.34
SMPD1-202ENST00000526280 RPL22P35268 128 aaKnown RBP12.95□□□□□ -0.34
SMPD1-202ENST00000526280 ADRA1AP35348 466 aa12.95□□□□□ -0.34
SMPD1-202ENST00000526280 ACTN2P35609 894 aa12.95□□□□□ -0.34
SMPD1-202ENST00000526280 COILP38432 576 aaPredicted RBP12.95□□□□□ -0.34
SMPD1-202ENST00000526280 CSNK1EP49674 416 aaKnown RBP12.95□□□□□ -0.34
SMPD1-202ENST00000526280 IRX4P78413 519 aa12.95□□□□□ -0.34
SMPD1-202ENST00000526280 LMNB2Q03252 620 aa12.95□□□□□ -0.34
SMPD1-202ENST00000526280 PTSQ03393 145 aa12.95□□□□□ -0.34
SMPD1-202ENST00000526280 ARHGEF7Q14155 803 aa12.95□□□□□ -0.34
SMPD1-202ENST00000526280 STAT4Q14765 748 aa12.95□□□□□ -0.34
SMPD1-202ENST00000526280 SF3A2Q15428 464 aaKnown RBP12.95□□□□□ -0.34
SMPD1-202ENST00000526280 SLC1A5Q15758 541 aa12.95□□□□□ -0.34
SMPD1-202ENST00000526280 CDKN3Q16667 212 aa12.95□□□□□ -0.34
SMPD1-202ENST00000526280 SIRPB2Q5JXA9 342 aa12.95□□□□□ -0.34
SMPD1-202ENST00000526280 KCTD11Q693B1 232 aa12.95□□□□□ -0.34
SMPD1-202ENST00000526280 TCEAL6Q6IPX3 200 aa12.95□□□□□ -0.34
SMPD1-202ENST00000526280 RANBP10Q6VN20 620 aa12.95□□□□□ -0.34
SMPD1-202ENST00000526280 GSTA5Q7RTV2 222 aa12.95□□□□□ -0.34
SMPD1-202ENST00000526280 PRUNE1Q86TP1 453 aa12.95□□□□□ -0.34
SMPD1-202ENST00000526280 IQCHQ86VS3 1027 aa12.95□□□□□ -0.34
SMPD1-202ENST00000526280 GPR161Q8N6U8 529 aaKnown RBP12.95□□□□□ -0.34
SMPD1-202ENST00000526280 MFSD2AQ8NA29 543 aa12.95□□□□□ -0.34
SMPD1-202ENST00000526280 TCEAL3Q969E4 200 aa12.95□□□□□ -0.34
SMPD1-202ENST00000526280 CAPZA3Q96KX2 299 aa12.95□□□□□ -0.34
SMPD1-202ENST00000526280 COQ10AQ96MF6 247 aa12.95□□□□□ -0.34
SMPD1-202ENST00000526280 C1QTNF7Q9BXJ2 289 aa12.95□□□□□ -0.34
SMPD1-202ENST00000526280 FSD1LQ9BXM9 530 aa12.95□□□□□ -0.34
SMPD1-202ENST00000526280 MAGEE1Q9HCI5 957 aa12.95□□□□□ -0.34
SMPD1-202ENST00000526280 AASDHPPTQ9NRN7 309 aa12.95□□□□□ -0.34
SMPD1-202ENST00000526280 PAK5Q9P286 719 aa12.95□□□□□ -0.34
SMPD1-202ENST00000526280 CA5BQ9Y2D0 317 aa12.95□□□□□ -0.34
SMPD1-202ENST00000526280 GVINP1Q7Z2Y8 2422 aa12.95□□□□□ -0.34
SMPD1-202ENST00000526280 ZNF292O60281 2723 aa12.95□□□□□ -0.34
SMPD1-202ENST00000526280 GOLGA6CA6NDK9 693 aa12.94□□□□□ -0.34
SMPD1-202ENST00000526280 GOLGA6BA6NDN3 693 aa12.94□□□□□ -0.34
SMPD1-202ENST00000526280 VILLO15195 856 aa12.94□□□□□ -0.34
SMPD1-202ENST00000526280 PSMD3O43242 534 aa12.94□□□□□ -0.34
SMPD1-202ENST00000526280 FOXD2O60548 495 aaPredicted RBP12.94□□□□□ -0.34
SMPD1-202ENST00000526280 PHF2O75151 1096 aa12.94□□□□□ -0.34
SMPD1-202ENST00000526280 RECQL5O94762 991 aaPredicted RBP12.94□□□□□ -0.34
SMPD1-202ENST00000526280 WNT1P04628 370 aa12.94□□□□□ -0.34
SMPD1-202ENST00000526280 GOLGA6DP0CG33 693 aa12.94□□□□□ -0.34
SMPD1-202ENST00000526280 HLA-DPA1P20036 260 aa12.94□□□□□ -0.34
SMPD1-202ENST00000526280 FDFT1P37268 417 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms