RNA–Protein interactions for RNA: ENST00000526271.2

CPSF1-201, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-201ENST00000526271 CSRP3P50461 194 aa14.33□□□□□ -0.12
CPSF1-201ENST00000526271 ZNF143P52747 638 aaPredicted RBP14.33□□□□□ -0.12
CPSF1-201ENST00000526271 ELP6Q0PNE2 266 aa14.33□□□□□ -0.12
CPSF1-201ENST00000526271 TPD52L1Q16890 204 aaPredicted RBP14.33□□□□□ -0.12
CPSF1-201ENST00000526271 PARP15Q460N3 678 aa14.33□□□□□ -0.12
CPSF1-201ENST00000526271 C14orf28Q4W4Y0 310 aa14.33□□□□□ -0.12
CPSF1-201ENST00000526271 SPECC1LQ69YQ0 1117 aa14.33□□□□□ -0.12
CPSF1-201ENST00000526271 CAVIN1Q6NZI2 390 aaKnown RBP14.33□□□□□ -0.12
CPSF1-201ENST00000526271 USP53Q70EK8 1073 aa14.33□□□□□ -0.12
CPSF1-201ENST00000526271 ZNF438Q7Z4V0 828 aa14.33□□□□□ -0.12
CPSF1-201ENST00000526271 GKN2Q86XP6 184 aa14.33□□□□□ -0.12
CPSF1-201ENST00000526271 ZNF354CQ86Y25 554 aa14.33□□□□□ -0.12
CPSF1-201ENST00000526271 FAM114A1Q8IWE2 563 aa14.33□□□□□ -0.12
CPSF1-201ENST00000526271 CBARPQ8N350 705 aaPredicted RBP14.33□□□□□ -0.12
CPSF1-201ENST00000526271 MSANTD4Q8NCY6 345 aa14.33□□□□□ -0.12
CPSF1-201ENST00000526271 FAM46DQ8NEK8 389 aa14.33□□□□□ -0.12
CPSF1-201ENST00000526271 OR56A4Q8NGH8 313 aa14.33□□□□□ -0.12
CPSF1-201ENST00000526271 NUDT22Q9BRQ3 303 aa14.33□□□□□ -0.12
CPSF1-201ENST00000526271 C1QTNF7Q9BXJ2 289 aa14.33□□□□□ -0.12
CPSF1-201ENST00000526271 TAS2R14Q9NYV8 317 aa14.33□□□□□ -0.12
CPSF1-201ENST00000526271 ADAM22Q9P0K1 906 aa14.33□□□□□ -0.12
CPSF1-201ENST00000526271 DOLKQ9UPQ8 538 aa14.33□□□□□ -0.12
CPSF1-201ENST00000526271 A0A0U1RQS6 177 aa14.32□□□□□ -0.12
CPSF1-201ENST00000526271 A8MX80 341 aa14.32□□□□□ -0.12
CPSF1-201ENST00000526271 B4DGG1 531 aa14.32□□□□□ -0.12
CPSF1-201ENST00000526271 TNFP01375 233 aa14.32□□□□□ -0.12
CPSF1-201ENST00000526271 ITGB2P05107 769 aa14.32□□□□□ -0.12
CPSF1-201ENST00000526271 FGF1P05230 155 aa14.32□□□□□ -0.12
CPSF1-201ENST00000526271 CSF2RBP32927 897 aa14.32□□□□□ -0.12
CPSF1-201ENST00000526271 PAPOLAP51003 745 aaKnown RBP14.32□□□□□ -0.12
CPSF1-201ENST00000526271 SUOXP51687 545 aa14.32□□□□□ -0.12
CPSF1-201ENST00000526271 OR1D5P58170 312 aa14.32□□□□□ -0.12
CPSF1-201ENST00000526271 RAD51Q06609 339 aa14.32□□□□□ -0.12
CPSF1-201ENST00000526271 NR1D2Q14995 579 aa14.32□□□□□ -0.12
CPSF1-201ENST00000526271 SCYL2Q6P3W7 929 aa14.32□□□□□ -0.12
CPSF1-201ENST00000526271 RFLNAQ6ZTI6 216 aa14.32□□□□□ -0.12
CPSF1-201ENST00000526271 APTXQ7Z2E3 356 aaKnown RBP14.32□□□□□ -0.12
CPSF1-201ENST00000526271 TAF8Q7Z7C8 310 aa14.32□□□□□ -0.12
CPSF1-201ENST00000526271 SRLQ86TD4 932 aa14.32□□□□□ -0.12
CPSF1-201ENST00000526271 RCBTB1Q8NDN9 531 aa14.32□□□□□ -0.12
CPSF1-201ENST00000526271 JPH3Q8WXH2 748 aaPredicted RBP14.32□□□□□ -0.12
CPSF1-201ENST00000526271 COQ10AQ96MF6 247 aa14.32□□□□□ -0.12
CPSF1-201ENST00000526271 ZNF641Q96N77 438 aaPredicted RBP14.32□□□□□ -0.12
CPSF1-201ENST00000526271 TMEM74Q96NL1 305 aa14.32□□□□□ -0.12
CPSF1-201ENST00000526271 MCEEQ96PE7 176 aa14.32□□□□□ -0.12
CPSF1-201ENST00000526271 SMIM14Q96QK8 99 aa14.32□□□□□ -0.12
CPSF1-201ENST00000526271 SLC12A9Q9BXP2 914 aa14.32□□□□□ -0.12
CPSF1-201ENST00000526271 TRIM7Q9C029 511 aa14.32□□□□□ -0.12
CPSF1-201ENST00000526271 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.32□□□□□ -0.12
CPSF1-201ENST00000526271 LRIT1Q9P2V4 623 aa14.32□□□□□ -0.12
CPSF1-201ENST00000526271 PLEKHM1Q9Y4G2 1056 aa14.32□□□□□ -0.12
CPSF1-201ENST00000526271 SPTAN1Q13813 2472 aaKnown RBP14.32□□□□□ -0.12
CPSF1-201ENST00000526271 TEX15Q9BXT5 2789 aa14.31□□□□□ -0.12
CPSF1-201ENST00000526271 CFAP69A5D8W1 941 aa14.31□□□□□ -0.12
CPSF1-201ENST00000526271 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.31□□□□□ -0.12
CPSF1-201ENST00000526271 PEX11BO96011 259 aa14.31□□□□□ -0.12
CPSF1-201ENST00000526271 CEACAM5P06731 702 aa14.31□□□□□ -0.12
CPSF1-201ENST00000526271 HOXC4P09017 264 aaPredicted RBP14.31□□□□□ -0.12
CPSF1-201ENST00000526271 JMJD7P0C870 316 aa14.31□□□□□ -0.12
CPSF1-201ENST00000526271 FGF3P11487 239 aaPredicted RBP14.31□□□□□ -0.12
CPSF1-201ENST00000526271 PNLIPP16233 465 aa14.31□□□□□ -0.12
CPSF1-201ENST00000526271 TNFAIP3P21580 790 aa14.31□□□□□ -0.12
CPSF1-201ENST00000526271 EEF1GP26641 437 aaKnown RBP14.31□□□□□ -0.12
CPSF1-201ENST00000526271 AK4P27144 223 aaPredicted RBP14.31□□□□□ -0.12
CPSF1-201ENST00000526271 HTR1BP28222 390 aa14.31□□□□□ -0.12
CPSF1-201ENST00000526271 CSNK1DP48730 415 aa14.31□□□□□ -0.12
CPSF1-201ENST00000526271 MAPK10P53779 464 aa14.31□□□□□ -0.12
CPSF1-201ENST00000526271 IHHQ14623 411 aa14.31□□□□□ -0.12
CPSF1-201ENST00000526271 EFHC2Q5JST6 749 aa14.31□□□□□ -0.12
CPSF1-201ENST00000526271 COLEC12Q5KU26 742 aa14.31□□□□□ -0.12
CPSF1-201ENST00000526271 BRAT1Q6PJG6 821 aa14.31□□□□□ -0.12
CPSF1-201ENST00000526271 DPPA4Q7L190 304 aa14.31□□□□□ -0.12
CPSF1-201ENST00000526271 PGBD5Q8N414 524 aa14.31□□□□□ -0.12
CPSF1-201ENST00000526271 GPBAR1Q8TDU6 330 aa14.31□□□□□ -0.12
CPSF1-201ENST00000526271 SCG3Q8WXD2 468 aaKnown RBP14.31□□□□□ -0.12
CPSF1-201ENST00000526271 KCTD15Q96SI1 283 aaPredicted RBP14.31□□□□□ -0.12
CPSF1-201ENST00000526271 SELENOOQ9BVL4 669 aa14.31□□□□□ -0.12
CPSF1-201ENST00000526271 STRADBQ9C0K7 418 aa14.31□□□□□ -0.12
CPSF1-201ENST00000526271 HSD3B7Q9H2F3 369 aa14.31□□□□□ -0.12
CPSF1-201ENST00000526271 CYP4F12Q9HCS2 524 aa14.31□□□□□ -0.12
CPSF1-201ENST00000526271 WDR70Q9NW82 654 aa14.31□□□□□ -0.12
CPSF1-201ENST00000526271 TMEM9Q9P0T7 183 aa14.31□□□□□ -0.12
CPSF1-201ENST00000526271 PCYT1BQ9Y5K3 369 aaPredicted RBP14.31□□□□□ -0.12
CPSF1-201ENST00000526271 IGHV5-10-1A0A0J9YXX1 117 aa14.3□□□□□ -0.12
CPSF1-201ENST00000526271 PRSS38A1L453 326 aa14.3□□□□□ -0.12
CPSF1-201ENST00000526271 PES1O00541 588 aaKnown RBP14.3□□□□□ -0.12
CPSF1-201ENST00000526271 TNFRSF10CO14798 259 aa14.3□□□□□ -0.12
CPSF1-201ENST00000526271 NUDT21O43809 227 aaKnown RBP14.3□□□□□ -0.12
CPSF1-201ENST00000526271 CR2P20023 1033 aa14.3□□□□□ -0.12
CPSF1-201ENST00000526271 LHCGRP22888 699 aa14.3□□□□□ -0.12
CPSF1-201ENST00000526271 CD1CP29017 333 aa14.3□□□□□ -0.12
CPSF1-201ENST00000526271 CNGA3Q16281 694 aa14.3□□□□□ -0.12
CPSF1-201ENST00000526271 TRIM72Q6ZMU5 477 aa14.3□□□□□ -0.12
CPSF1-201ENST00000526271 NAGSQ8N159 534 aa14.3□□□□□ -0.12
CPSF1-201ENST00000526271 NKD1Q969G9 470 aa14.3□□□□□ -0.12
CPSF1-201ENST00000526271 TUBGCP5Q96RT8 1024 aa14.3□□□□□ -0.12
CPSF1-201ENST00000526271 SEMA3CQ99985 751 aa14.3□□□□□ -0.12
CPSF1-201ENST00000526271 NCAPGQ9BPX3 1015 aa14.3□□□□□ -0.12
CPSF1-201ENST00000526271 FRMD8Q9BZ67 464 aaPredicted RBP14.3□□□□□ -0.12
CPSF1-201ENST00000526271 B4GALT6Q9UBX8 382 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms