RNA–Protein interactions for RNA: ENST00000526054.5

VPS28-204, Transcript of VPS28, ESCRT-I subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS28, Length 892 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-204ENST00000526054 PEX11BO96011 259 aa10.21□□□□□ -0.77
VPS28-204ENST00000526054 UGT2B4P06133 528 aa10.21□□□□□ -0.77
VPS28-204ENST00000526054 ALPPL2P10696 532 aa10.21□□□□□ -0.77
VPS28-204ENST00000526054 PECAM1P16284 738 aaPredicted RBP10.21□□□□□ -0.77
VPS28-204ENST00000526054 ITGB7P26010 798 aa10.21□□□□□ -0.77
VPS28-204ENST00000526054 CLDN2P57739 230 aa10.21□□□□□ -0.77
VPS28-204ENST00000526054 AP1S1P61966 158 aa10.21□□□□□ -0.77
VPS28-204ENST00000526054 E2F1Q01094 437 aa10.21□□□□□ -0.77
VPS28-204ENST00000526054 NSUN2Q08J23 767 aaKnown RBP eCLIP10.21□□□□□ -0.77
VPS28-204ENST00000526054 TMEM259Q4ZIN3 620 aa10.21□□□□□ -0.77
VPS28-204ENST00000526054 RALGPS1Q5JS13 557 aa10.21□□□□□ -0.77
VPS28-204ENST00000526054 CFAP58Q5T655 872 aa10.21□□□□□ -0.77
VPS28-204ENST00000526054 GDPD4Q6W3E5 623 aa10.21□□□□□ -0.77
VPS28-204ENST00000526054 KDM7AQ6ZMT4 941 aa10.21□□□□□ -0.77
VPS28-204ENST00000526054 ABI3BPQ7Z7G0 1075 aa10.21□□□□□ -0.77
VPS28-204ENST00000526054 SRLQ86TD4 932 aa10.21□□□□□ -0.77
VPS28-204ENST00000526054 ZSCAN30Q86W11 494 aa10.21□□□□□ -0.77
VPS28-204ENST00000526054 REXO1L1PQ8IX06 675 aa10.21□□□□□ -0.77
VPS28-204ENST00000526054 SLC22A18ASQ8N1D0 253 aa10.21□□□□□ -0.77
VPS28-204ENST00000526054 SLC25A45Q8N413 288 aa10.21□□□□□ -0.77
VPS28-204ENST00000526054 TEX26Q8N6G2 289 aa10.21□□□□□ -0.77
VPS28-204ENST00000526054 PAF1Q8N7H5 531 aa10.21□□□□□ -0.77
VPS28-204ENST00000526054 DCBLD1Q8N8Z6 715 aa10.21□□□□□ -0.77
VPS28-204ENST00000526054 TTC13Q8NBP0 860 aa10.21□□□□□ -0.77
VPS28-204ENST00000526054 TSEN2Q8NCE0 465 aaKnown RBP10.21□□□□□ -0.77
VPS28-204ENST00000526054 SNIP1Q8TAD8 396 aaKnown RBP10.21□□□□□ -0.77
VPS28-204ENST00000526054 TFB1MQ8WVM0 346 aaKnown RBP10.21□□□□□ -0.77
VPS28-204ENST00000526054 HAUS1Q96CS2 278 aa10.21□□□□□ -0.77
VPS28-204ENST00000526054 TUBGCP5Q96RT8 1024 aa10.21□□□□□ -0.77
VPS28-204ENST00000526054 LGMNQ99538 433 aa10.21□□□□□ -0.77
VPS28-204ENST00000526054 FERMT1Q9BQL6 677 aa10.21□□□□□ -0.77
VPS28-204ENST00000526054 MGME1Q9BQP7 344 aa10.21□□□□□ -0.77
VPS28-204ENST00000526054 CPEB1Q9BZB8 566 aaKnown RBP10.21□□□□□ -0.77
VPS28-204ENST00000526054 CARD9Q9H257 536 aa10.21□□□□□ -0.77
VPS28-204ENST00000526054 ATP13A3Q9H7F0 1226 aa10.21□□□□□ -0.77
VPS28-204ENST00000526054 NT5MQ9NPB1 228 aa10.21□□□□□ -0.77
VPS28-204ENST00000526054 TRMT1Q9NXH9 659 aaKnown RBP10.21□□□□□ -0.77
VPS28-204ENST00000526054 ZFR2Q9UPR6 939 aaKnown RBP10.21□□□□□ -0.77
VPS28-204ENST00000526054 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.2□□□□□ -0.78
VPS28-204ENST00000526054 HACD1B0YJ81 288 aa10.2□□□□□ -0.78
VPS28-204ENST00000526054 H3BM21 787 aa10.2□□□□□ -0.78
VPS28-204ENST00000526054 INSIG1O15503 277 aa10.2□□□□□ -0.78
VPS28-204ENST00000526054 MTSS1O43312 755 aa10.2□□□□□ -0.78
VPS28-204ENST00000526054 ZNF189O75820 626 aaPredicted RBP10.2□□□□□ -0.78
VPS28-204ENST00000526054 ADRB3P13945 408 aa10.2□□□□□ -0.78
VPS28-204ENST00000526054 CCNB1P14635 433 aa10.2□□□□□ -0.78
VPS28-204ENST00000526054 SERPINA4P29622 427 aa10.2□□□□□ -0.78
VPS28-204ENST00000526054 GKP32189 559 aa10.2□□□□□ -0.78
VPS28-204ENST00000526054 ACTN2P35609 894 aa10.2□□□□□ -0.78
VPS28-204ENST00000526054 RGRP47804 291 aa10.2□□□□□ -0.78
VPS28-204ENST00000526054 SCNN1BP51168 640 aa10.2□□□□□ -0.78
VPS28-204ENST00000526054 RPS21P63220 83 aaKnown RBP10.2□□□□□ -0.78
VPS28-204ENST00000526054 IFI35P80217 286 aaPredicted RBP10.2□□□□□ -0.78
VPS28-204ENST00000526054 ADCY2Q08462 1091 aa10.2□□□□□ -0.78
VPS28-204ENST00000526054 ITKQ08881 620 aa10.2□□□□□ -0.78
VPS28-204ENST00000526054 XRCC4Q13426 336 aa10.2□□□□□ -0.78
VPS28-204ENST00000526054 PRKD1Q15139 912 aaPredicted RBP10.2□□□□□ -0.78
VPS28-204ENST00000526054 NOMO1Q15155 1222 aa10.2□□□□□ -0.78
VPS28-204ENST00000526054 ZNF805Q5CZA5 627 aa10.2□□□□□ -0.78
VPS28-204ENST00000526054 ZNF569Q5MCW4 686 aa10.2□□□□□ -0.78
VPS28-204ENST00000526054 KIAA1161Q6NSJ0 714 aa10.2□□□□□ -0.78
VPS28-204ENST00000526054 AADACL2Q6P093 401 aa10.2□□□□□ -0.78
VPS28-204ENST00000526054 KYAT3Q6YP21 454 aaKnown RBP10.2□□□□□ -0.78
VPS28-204ENST00000526054 Q6ZSR6 202 aa10.2□□□□□ -0.78
VPS28-204ENST00000526054 CDKL3Q8IVW4 592 aaPredicted RBP10.2□□□□□ -0.78
VPS28-204ENST00000526054 CACTIN-AS1Q8N1I8 211 aa10.2□□□□□ -0.78
VPS28-204ENST00000526054 FAM174AQ8TBP5 190 aa10.2□□□□□ -0.78
VPS28-204ENST00000526054 IFT43Q96FT9 208 aa10.2□□□□□ -0.78
VPS28-204ENST00000526054 ZNF641Q96N77 438 aaPredicted RBP10.2□□□□□ -0.78
VPS28-204ENST00000526054 FCRL3Q96P31 734 aaPredicted RBP10.2□□□□□ -0.78
VPS28-204ENST00000526054 QKIQ96PU8 341 aaKnown RBP eCLIP10.2□□□□□ -0.78
VPS28-204ENST00000526054 NUDCD1Q96RS6 583 aa10.2□□□□□ -0.78
VPS28-204ENST00000526054 POLR1EQ9GZS1 481 aaKnown RBP10.2□□□□□ -0.78
VPS28-204ENST00000526054 EVA1BQ9NVM1 165 aa10.2□□□□□ -0.78
VPS28-204ENST00000526054 RBM22Q9NW64 420 aaKnown RBP eCLIP10.2□□□□□ -0.78
VPS28-204ENST00000526054 DNAJC28Q9NX36 388 aa10.2□□□□□ -0.78
VPS28-204ENST00000526054 NLGN3Q9NZ94 848 aa10.2□□□□□ -0.78
VPS28-204ENST00000526054 PYCARDQ9ULZ3 195 aa10.2□□□□□ -0.78
VPS28-204ENST00000526054 JRKLQ9Y4A0 524 aa10.2□□□□□ -0.78
VPS28-204ENST00000526054 TTLL3Q9Y4R7 772 aa10.2□□□□□ -0.78
VPS28-204ENST00000526054 A0A1W2PQ67 120 aa10.19□□□□□ -0.78
VPS28-204ENST00000526054 NEMP2A6NFY4 417 aa10.19□□□□□ -0.78
VPS28-204ENST00000526054 C16orf96A6NNT2 1141 aa10.19□□□□□ -0.78
VPS28-204ENST00000526054 H7C0C1 242 aa10.19□□□□□ -0.78
VPS28-204ENST00000526054 KCNK1O00180 336 aa10.19□□□□□ -0.78
VPS28-204ENST00000526054 MUSKO15146 869 aa10.19□□□□□ -0.78
VPS28-204ENST00000526054 PIGNO95427 931 aa10.19□□□□□ -0.78
VPS28-204ENST00000526054 MT-CO3P00414 261 aa10.19□□□□□ -0.78
VPS28-204ENST00000526054 HLA-DQB2P05538 268 aa10.19□□□□□ -0.78
VPS28-204ENST00000526054 CKMT1AP12532 417 aa10.19□□□□□ -0.78
VPS28-204ENST00000526054 CR2P20023 1033 aa10.19□□□□□ -0.78
VPS28-204ENST00000526054 CA4P22748 312 aa10.19□□□□□ -0.78
VPS28-204ENST00000526054 XPAP23025 273 aaPredicted RBP10.19□□□□□ -0.78
VPS28-204ENST00000526054 CES1P23141 567 aa10.19□□□□□ -0.78
VPS28-204ENST00000526054 ATP5OP48047 213 aa10.19□□□□□ -0.78
VPS28-204ENST00000526054 MAXP61244 160 aa10.19□□□□□ -0.78
VPS28-204ENST00000526054 HNRNPKP61978 463 aaKnown RBP eCLIP10.19□□□□□ -0.78
VPS28-204ENST00000526054 OTUD4Q01804 1114 aaKnown RBP10.19□□□□□ -0.78
VPS28-204ENST00000526054 BCL2L1Q07817 233 aa10.19□□□□□ -0.78
VPS28-204ENST00000526054 TBC1D25Q3MII6 688 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms