RNA–Protein interactions for RNA: ENST00000525745.5

ECHDC1-218, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-218ENST00000525745 MAN1A1P33908 653 aa2.78□□□□□ -1.96
ECHDC1-218ENST00000525745 HNF1BP35680 557 aa2.78□□□□□ -1.96
ECHDC1-218ENST00000525745 RFX5P48382 616 aaPredicted RBP2.78□□□□□ -1.96
ECHDC1-218ENST00000525745 RASSF2P50749 326 aa2.78□□□□□ -1.96
ECHDC1-218ENST00000525745 ART1P52961 327 aa2.78□□□□□ -1.96
ECHDC1-218ENST00000525745 UBE3AQ05086 875 aa2.78□□□□□ -1.96
ECHDC1-218ENST00000525745 Q0VFX4 171 aa2.78□□□□□ -1.96
ECHDC1-218ENST00000525745 TBL3Q12788 808 aaKnown RBP2.78□□□□□ -1.96
ECHDC1-218ENST00000525745 TRAF1Q13077 416 aa2.78□□□□□ -1.96
ECHDC1-218ENST00000525745 CUL4AQ13619 759 aa2.78□□□□□ -1.96
ECHDC1-218ENST00000525745 TUBB2AQ13885 445 aa2.78□□□□□ -1.96
ECHDC1-218ENST00000525745 IL13RA2Q14627 380 aa2.78□□□□□ -1.96
ECHDC1-218ENST00000525745 SHBQ15464 509 aa2.78□□□□□ -1.96
ECHDC1-218ENST00000525745 TWISTNBQ3B726 338 aaPredicted RBP2.78□□□□□ -1.96
ECHDC1-218ENST00000525745 SH2D4BQ5SQS7 431 aa2.78□□□□□ -1.96
ECHDC1-218ENST00000525745 FNBP1LQ5T0N5 605 aa2.78□□□□□ -1.96
ECHDC1-218ENST00000525745 GFI1BQ5VTD9 330 aa2.78□□□□□ -1.96
ECHDC1-218ENST00000525745 FAM180BQ6P0A1 224 aa2.78□□□□□ -1.96
ECHDC1-218ENST00000525745 FAM83HQ6ZRV2 1179 aaPredicted RBP2.78□□□□□ -1.96
ECHDC1-218ENST00000525745 CCDC112Q8NEF3 446 aa2.78□□□□□ -1.96
ECHDC1-218ENST00000525745 ENGASEQ8NFI3 743 aa2.78□□□□□ -1.96
ECHDC1-218ENST00000525745 FAR1Q8WVX9 515 aa2.78□□□□□ -1.96
ECHDC1-218ENST00000525745 NR4A3Q92570 626 aa2.78□□□□□ -1.96
ECHDC1-218ENST00000525745 RNFT2Q96EX2 444 aa2.78□□□□□ -1.96
ECHDC1-218ENST00000525745 COG3Q96JB2 828 aa2.78□□□□□ -1.96
ECHDC1-218ENST00000525745 TWNKQ96RR1 684 aa2.78□□□□□ -1.96
ECHDC1-218ENST00000525745 CD180Q99467 661 aa2.78□□□□□ -1.96
ECHDC1-218ENST00000525745 TUBB2BQ9BVA1 445 aa2.78□□□□□ -1.96
ECHDC1-218ENST00000525745 NPLQ9BXD5 320 aaPredicted RBP2.78□□□□□ -1.96
ECHDC1-218ENST00000525745 POLDIP3Q9BY77 421 aaKnown RBP2.78□□□□□ -1.96
ECHDC1-218ENST00000525745 FRMD8Q9BZ67 464 aaPredicted RBP2.78□□□□□ -1.96
ECHDC1-218ENST00000525745 LRRCC1Q9C099 1032 aa2.78□□□□□ -1.96
ECHDC1-218ENST00000525745 DCTPP1Q9H773 170 aa2.78□□□□□ -1.96
ECHDC1-218ENST00000525745 CATSPERBQ9H7T0 1116 aa2.78□□□□□ -1.96
ECHDC1-218ENST00000525745 TTC12Q9H892 705 aaPredicted RBP2.78□□□□□ -1.96
ECHDC1-218ENST00000525745 ACTR5Q9H9F9 607 aaPredicted RBP2.78□□□□□ -1.96
ECHDC1-218ENST00000525745 PNRC2Q9NPJ4 139 aaKnown RBP2.78□□□□□ -1.96
ECHDC1-218ENST00000525745 GGA3Q9NZ52 723 aa2.78□□□□□ -1.96
ECHDC1-218ENST00000525745 CD207Q9UJ71 328 aa2.78□□□□□ -1.96
ECHDC1-218ENST00000525745 CFAP45Q9UL16 551 aa2.78□□□□□ -1.96
ECHDC1-218ENST00000525745 GDAQ9Y2T3 454 aa2.78□□□□□ -1.96
ECHDC1-218ENST00000525745 RAP2CQ9Y3L5 183 aa2.78□□□□□ -1.96
ECHDC1-218ENST00000525745 CHD1O14646 1710 aa2.78□□□□□ -1.96
ECHDC1-218ENST00000525745 KNDC1Q76NI1 1749 aa2.78□□□□□ -1.96
ECHDC1-218ENST00000525745 CEP170BQ9Y4F5 1589 aaPredicted RBP2.78□□□□□ -1.96
ECHDC1-218ENST00000525745 SLIT1O75093 1534 aa2.78□□□□□ -1.97
ECHDC1-218ENST00000525745 MST1RQ04912 1400 aa2.77□□□□□ -1.97
ECHDC1-218ENST00000525745 KIDINS220Q9ULH0 1771 aa2.77□□□□□ -1.97
ECHDC1-218ENST00000525745 TRBV5-7A0A0A0MS05 114 aa2.77□□□□□ -1.97
ECHDC1-218ENST00000525745 TARSL2A2RTX5 802 aaKnown RBP2.77□□□□□ -1.97
ECHDC1-218ENST00000525745 SH2D7A6NKC9 451 aaPredicted RBP2.77□□□□□ -1.97
ECHDC1-218ENST00000525745 SMTNL1A8MU46 457 aa2.77□□□□□ -1.97
ECHDC1-218ENST00000525745 PEX12O00623 359 aa2.77□□□□□ -1.97
ECHDC1-218ENST00000525745 NCAM2O15394 837 aa2.77□□□□□ -1.97
ECHDC1-218ENST00000525745 ATP8B1O43520 1251 aa2.77□□□□□ -1.97
ECHDC1-218ENST00000525745 TMCC1O94876 653 aa2.77□□□□□ -1.97
ECHDC1-218ENST00000525745 GAS8-AS1O95177 125 aa2.77□□□□□ -1.97
ECHDC1-218ENST00000525745 POLBP06746 335 aa2.77□□□□□ -1.97
ECHDC1-218ENST00000525745 MX1P20591 662 aa2.77□□□□□ -1.97
ECHDC1-218ENST00000525745 HOXD3P31249 432 aaPredicted RBP2.77□□□□□ -1.97
ECHDC1-218ENST00000525745 RFC1P35251 1148 aaPredicted RBP2.77□□□□□ -1.97
ECHDC1-218ENST00000525745 GJC1P36383 396 aa2.77□□□□□ -1.97
ECHDC1-218ENST00000525745 PGM1P36871 562 aa2.77□□□□□ -1.97
ECHDC1-218ENST00000525745 USP8P40818 1118 aa2.77□□□□□ -1.97
ECHDC1-218ENST00000525745 MTNR1AP48039 350 aa2.77□□□□□ -1.97
ECHDC1-218ENST00000525745 PDLIM4P50479 330 aa2.77□□□□□ -1.97
ECHDC1-218ENST00000525745 CLCN5P51795 746 aa2.77□□□□□ -1.97
ECHDC1-218ENST00000525745 TMPRSS3P57727 454 aa2.77□□□□□ -1.97
ECHDC1-218ENST00000525745 SELENOVP59797 346 aa2.77□□□□□ -1.97
ECHDC1-218ENST00000525745 ABATP80404 500 aa2.77□□□□□ -1.97
ECHDC1-218ENST00000525745 CHRNDQ07001 517 aa2.77□□□□□ -1.97
ECHDC1-218ENST00000525745 DMTNQ08495 405 aa2.77□□□□□ -1.97
ECHDC1-218ENST00000525745 NAA25Q14CX7 972 aa2.77□□□□□ -1.97
ECHDC1-218ENST00000525745 WDR45BQ5MNZ6 344 aa2.77□□□□□ -1.97
ECHDC1-218ENST00000525745 CCDC30Q5VVM6 783 aa2.77□□□□□ -1.97
ECHDC1-218ENST00000525745 DCAF12L2Q5VW00 463 aa2.77□□□□□ -1.97
ECHDC1-218ENST00000525745 PRSS57Q6UWY2 283 aa2.77□□□□□ -1.97
ECHDC1-218ENST00000525745 RSRC2Q7L4I2 434 aaKnown RBP2.77□□□□□ -1.97
ECHDC1-218ENST00000525745 ZNF329Q86UD4 541 aa2.77□□□□□ -1.97
ECHDC1-218ENST00000525745 WDR5BQ86VZ2 330 aa2.77□□□□□ -1.97
ECHDC1-218ENST00000525745 HEATR4Q86WZ0 1026 aa2.77□□□□□ -1.97
ECHDC1-218ENST00000525745 KRT222Q8N1A0 295 aa2.77□□□□□ -1.97
ECHDC1-218ENST00000525745 GHDCQ8N2G8 530 aa2.77□□□□□ -1.97
ECHDC1-218ENST00000525745 LRRC57Q8N9N7 239 aa2.77□□□□□ -1.97
ECHDC1-218ENST00000525745 SCAIQ8N9R8 606 aa2.77□□□□□ -1.97
ECHDC1-218ENST00000525745 WFIKKN2Q8TEU8 576 aa2.77□□□□□ -1.97
ECHDC1-218ENST00000525745 ADAMTS14Q8WXS8 1223 aa2.77□□□□□ -1.97
ECHDC1-218ENST00000525745 HVCN1Q96D96 273 aa2.77□□□□□ -1.97
ECHDC1-218ENST00000525745 KIF1BPQ96EK5 621 aa2.77□□□□□ -1.97
ECHDC1-218ENST00000525745 ZNF333Q96JL9 665 aa2.77□□□□□ -1.97
ECHDC1-218ENST00000525745 TEFMQ96QE5 360 aaKnown RBP2.77□□□□□ -1.97
ECHDC1-218ENST00000525745 FRG2BQ96QU4 278 aa2.77□□□□□ -1.97
ECHDC1-218ENST00000525745 PLEKHF1Q96S99 279 aa2.77□□□□□ -1.97
ECHDC1-218ENST00000525745 WDR77Q9BQA1 342 aaPredicted RBP2.77□□□□□ -1.97
ECHDC1-218ENST00000525745 TAOK3Q9H2K8 898 aa2.77□□□□□ -1.97
ECHDC1-218ENST00000525745 ZSCAN16Q9H4T2 348 aaPredicted RBP2.77□□□□□ -1.97
ECHDC1-218ENST00000525745 STN1Q9H668 368 aaKnown RBP2.77□□□□□ -1.97
ECHDC1-218ENST00000525745 RRAGDQ9NQL2 400 aaPredicted RBP2.77□□□□□ -1.97
ECHDC1-218ENST00000525745 RNF146Q9NTX7 359 aa2.77□□□□□ -1.97
ECHDC1-218ENST00000525745 ZDHHC7Q9NXF8 308 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms