RNA–Protein interactions for RNA: ENST00000525685.5

CD44-219, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-219ENST00000525685 PCNAP12004 261 aa4.06□□□□□ -1.76
CD44-219ENST00000525685 ATP1A3P13637 1013 aa4.06□□□□□ -1.76
CD44-219ENST00000525685 COX7A2P14406 83 aa4.06□□□□□ -1.76
CD44-219ENST00000525685 TBXAS1P24557 533 aaPredicted RBP4.06□□□□□ -1.76
CD44-219ENST00000525685 ABCD3P28288 659 aa4.06□□□□□ -1.76
CD44-219ENST00000525685 PPP2R1AP30153 589 aa4.06□□□□□ -1.76
CD44-219ENST00000525685 CASP6P55212 293 aa4.06□□□□□ -1.76
CD44-219ENST00000525685 UFM1P61960 85 aa4.06□□□□□ -1.76
CD44-219ENST00000525685 ITGADQ13349 1161 aa4.06□□□□□ -1.76
CD44-219ENST00000525685 GPR18Q14330 331 aa4.06□□□□□ -1.76
CD44-219ENST00000525685 TAF11Q15544 211 aa4.06□□□□□ -1.76
CD44-219ENST00000525685 RPE65Q16518 533 aa4.06□□□□□ -1.76
CD44-219ENST00000525685 ZNF766Q5HY98 468 aa4.06□□□□□ -1.76
CD44-219ENST00000525685 Q5PR19 223 aa4.06□□□□□ -1.76
CD44-219ENST00000525685 FAAH2Q6GMR7 532 aa4.06□□□□□ -1.76
CD44-219ENST00000525685 ACAD10Q6JQN1 1059 aa4.06□□□□□ -1.76
CD44-219ENST00000525685 CRELD2Q6UXH1 353 aaPredicted RBP4.06□□□□□ -1.76
CD44-219ENST00000525685 ATF7IPQ6VMQ6 1270 aa4.06□□□□□ -1.76
CD44-219ENST00000525685 MAATS1Q7Z4T9 603 aa4.06□□□□□ -1.76
CD44-219ENST00000525685 FAM160B2Q86V87 743 aa4.06□□□□□ -1.76
CD44-219ENST00000525685 GPSM1Q86YR5 675 aa4.06□□□□□ -1.76
CD44-219ENST00000525685 C11orf65Q8NCR3 313 aa4.06□□□□□ -1.76
CD44-219ENST00000525685 IL17REQ8NFR9 667 aa4.06□□□□□ -1.76
CD44-219ENST00000525685 SLC35F5Q8WV83 523 aa4.06□□□□□ -1.76
CD44-219ENST00000525685 OTULINQ96BN8 352 aa4.06□□□□□ -1.76
CD44-219ENST00000525685 EVI5LQ96CN4 794 aa4.06□□□□□ -1.76
CD44-219ENST00000525685 RNF183Q96D59 192 aa4.06□□□□□ -1.76
CD44-219ENST00000525685 SAAL1Q96ER3 474 aa4.06□□□□□ -1.76
CD44-219ENST00000525685 MPP4Q96JB8 637 aa4.06□□□□□ -1.76
CD44-219ENST00000525685 CLSTN3Q9BQT9 956 aa4.06□□□□□ -1.76
CD44-219ENST00000525685 FUZQ9BT04 418 aa4.06□□□□□ -1.76
CD44-219ENST00000525685 CATSPERBQ9H7T0 1116 aa4.06□□□□□ -1.76
CD44-219ENST00000525685 SMC4Q9NTJ3 1288 aa4.06□□□□□ -1.76
CD44-219ENST00000525685 CTNNAL1Q9UBT7 734 aa4.06□□□□□ -1.76
CD44-219ENST00000525685 CLDN16Q9Y5I7 305 aa4.06□□□□□ -1.76
CD44-219ENST00000525685 NUP188Q5SRE5 1749 aa4.06□□□□□ -1.76
CD44-219ENST00000525685 TTC3P53804 2025 aa4.05□□□□□ -1.76
CD44-219ENST00000525685 BTAF1O14981 1849 aa4.05□□□□□ -1.76
CD44-219ENST00000525685 PABPN1LA6NDY0 278 aaKnown RBP4.05□□□□□ -1.76
CD44-219ENST00000525685 SPTLC2O15270 562 aa4.05□□□□□ -1.76
CD44-219ENST00000525685 MBD4O95243 580 aa4.05□□□□□ -1.76
CD44-219ENST00000525685 CRYABP02511 175 aaKnown RBP4.05□□□□□ -1.76
CD44-219ENST00000525685 GALTP07902 379 aa4.05□□□□□ -1.76
CD44-219ENST00000525685 MYZAPP0CAP1 466 aa4.05□□□□□ -1.76
CD44-219ENST00000525685 IRF1P10914 325 aa4.05□□□□□ -1.76
CD44-219ENST00000525685 ZNF8P17098 575 aaPredicted RBP4.05□□□□□ -1.76
CD44-219ENST00000525685 CD53P19397 219 aa4.05□□□□□ -1.76
CD44-219ENST00000525685 DDIT3P35638 169 aa4.05□□□□□ -1.76
CD44-219ENST00000525685 PPP3CCP48454 512 aa4.05□□□□□ -1.76
CD44-219ENST00000525685 BLKP51451 505 aa4.05□□□□□ -1.76
CD44-219ENST00000525685 CLCN5P51795 746 aa4.05□□□□□ -1.76
CD44-219ENST00000525685 CYP4A11Q02928 519 aa4.05□□□□□ -1.76
CD44-219ENST00000525685 CAPSQ13938 189 aa4.05□□□□□ -1.76
CD44-219ENST00000525685 PPP2R5BQ15173 497 aa4.05□□□□□ -1.76
CD44-219ENST00000525685 RALBP1Q15311 655 aa4.05□□□□□ -1.76
CD44-219ENST00000525685 OTUD1Q5VV17 481 aaPredicted RBP4.05□□□□□ -1.76
CD44-219ENST00000525685 TMEM81Q6P7N7 255 aa4.05□□□□□ -1.76
CD44-219ENST00000525685 CPLX2Q6PUV4 134 aaKnown RBP4.05□□□□□ -1.76
CD44-219ENST00000525685 C9orf47Q6ZRZ4 202 aa4.05□□□□□ -1.76
CD44-219ENST00000525685 RSRC2Q7L4I2 434 aaKnown RBP4.05□□□□□ -1.76
CD44-219ENST00000525685 CTU1Q7Z7A3 348 aaKnown RBP4.05□□□□□ -1.76
CD44-219ENST00000525685 KIAA2013Q8IYS2 634 aa4.05□□□□□ -1.76
CD44-219ENST00000525685 PCYOX1LQ8NBM8 494 aa4.05□□□□□ -1.76
CD44-219ENST00000525685 GABPB2Q8TAK5 448 aaPredicted RBP4.05□□□□□ -1.76
CD44-219ENST00000525685 UCMAQ8WVF2 138 aa4.05□□□□□ -1.76
CD44-219ENST00000525685 UBE2Q2Q8WVN8 375 aa4.05□□□□□ -1.76
CD44-219ENST00000525685 BBS4Q96RK4 519 aa4.05□□□□□ -1.76
CD44-219ENST00000525685 SLC25A18Q9H1K4 315 aa4.05□□□□□ -1.76
CD44-219ENST00000525685 MAP6D1Q9H9H5 199 aa4.05□□□□□ -1.76
CD44-219ENST00000525685 WDR6Q9NNW5 1121 aaKnown RBP4.05□□□□□ -1.76
CD44-219ENST00000525685 KRCC1Q9NPI7 259 aaPredicted RBP4.05□□□□□ -1.76
CD44-219ENST00000525685 SNTG1Q9NSN8 517 aa4.05□□□□□ -1.76
CD44-219ENST00000525685 SIRT3Q9NTG7 399 aaPredicted RBP4.05□□□□□ -1.76
CD44-219ENST00000525685 ZBTB40Q9NUA8 1239 aa4.05□□□□□ -1.76
CD44-219ENST00000525685 KCND2Q9NZV8 630 aa4.05□□□□□ -1.76
CD44-219ENST00000525685 TMEM98Q9Y2Y6 226 aa4.05□□□□□ -1.76
CD44-219ENST00000525685 KDM6AO15550 1401 aaPredicted RBP4.04□□□□□ -1.76
CD44-219ENST00000525685 ADAMTS7Q9UKP4 1686 aa4.04□□□□□ -1.76
CD44-219ENST00000525685 PCDH11XQ9BZA7 1347 aa4.04□□□□□ -1.76
CD44-219ENST00000525685 PCDH11YQ9BZA8 1340 aa4.04□□□□□ -1.76
CD44-219ENST00000525685 PAPPAQ13219 1627 aa4.04□□□□□ -1.76
CD44-219ENST00000525685 A0A0G2JK05 382 aa4.04□□□□□ -1.76
CD44-219ENST00000525685 A0A1W2PPH5 198 aa4.04□□□□□ -1.76
CD44-219ENST00000525685 KDM4EB2RXH2 506 aaPredicted RBP4.04□□□□□ -1.76
CD44-219ENST00000525685 B4DGG1 531 aa4.04□□□□□ -1.76
CD44-219ENST00000525685 ATG13O75143 517 aa4.04□□□□□ -1.76
CD44-219ENST00000525685 TACC1O75410 805 aa4.04□□□□□ -1.76
CD44-219ENST00000525685 EPN2O95208 641 aa4.04□□□□□ -1.76
CD44-219ENST00000525685 FGF2P09038 288 aa4.04□□□□□ -1.76
CD44-219ENST00000525685 CBSLP0DN79 551 aa4.04□□□□□ -1.76
CD44-219ENST00000525685 CHRNB2P17787 502 aa4.04□□□□□ -1.76
CD44-219ENST00000525685 TNFRSF1BP20333 461 aa4.04□□□□□ -1.76
CD44-219ENST00000525685 TKTP29401 623 aaKnown RBP4.04□□□□□ -1.76
CD44-219ENST00000525685 CCKARP32238 428 aa4.04□□□□□ -1.76
CD44-219ENST00000525685 CCKBRP32239 447 aa4.04□□□□□ -1.76
CD44-219ENST00000525685 CBSP35520 551 aa4.04□□□□□ -1.76
CD44-219ENST00000525685 ARL1P40616 181 aaPredicted RBP4.04□□□□□ -1.76
CD44-219ENST00000525685 NR1H2P55055 460 aa4.04□□□□□ -1.76
CD44-219ENST00000525685 ARHGEF6Q15052 776 aa4.04□□□□□ -1.76
CD44-219ENST00000525685 ZNF667Q5HYK9 610 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms