RNA–Protein interactions for RNA: ENST00000525303.5

TRAPPC4-206, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 654 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-206ENST00000525303 OR1A2Q9Y585 309 aa9.65□□□□□ -0.86
TRAPPC4-206ENST00000525303 HEMK1Q9Y5R4 338 aaPredicted RBP9.65□□□□□ -0.86
TRAPPC4-206ENST00000525303 NBASA2RRP1 2371 aa9.64□□□□□ -0.87
TRAPPC4-206ENST00000525303 C2CD4BA6NLJ0 364 aa9.64□□□□□ -0.87
TRAPPC4-206ENST00000525303 TMEM110-MUSTN1A8MSY1 372 aa9.64□□□□□ -0.87
TRAPPC4-206ENST00000525303 PIGNO95427 931 aa9.64□□□□□ -0.87
TRAPPC4-206ENST00000525303 PCCBP05166 539 aa9.64□□□□□ -0.87
TRAPPC4-206ENST00000525303 LIPCP11150 499 aa9.64□□□□□ -0.87
TRAPPC4-206ENST00000525303 ITIH1P19827 911 aa9.64□□□□□ -0.87
TRAPPC4-206ENST00000525303 CCKBRP32239 447 aa9.64□□□□□ -0.87
TRAPPC4-206ENST00000525303 PTPN9P43378 593 aa9.64□□□□□ -0.87
TRAPPC4-206ENST00000525303 CSRP3P50461 194 aa9.64□□□□□ -0.87
TRAPPC4-206ENST00000525303 SRP54P61011 504 aaKnown RBP9.64□□□□□ -0.87
TRAPPC4-206ENST00000525303 NFKB2Q00653 900 aa9.64□□□□□ -0.87
TRAPPC4-206ENST00000525303 INPP5AQ14642 412 aa9.64□□□□□ -0.87
TRAPPC4-206ENST00000525303 SLC18A3Q16572 532 aa9.64□□□□□ -0.87
TRAPPC4-206ENST00000525303 INO80DQ53TQ3 878 aaPredicted RBP9.64□□□□□ -0.87
TRAPPC4-206ENST00000525303 KCTD16Q68DU8 428 aa9.64□□□□□ -0.87
TRAPPC4-206ENST00000525303 ALKBH5Q6P6C2 394 aaKnown RBP9.64□□□□□ -0.87
TRAPPC4-206ENST00000525303 STRADAQ7RTN6 431 aa9.64□□□□□ -0.87
TRAPPC4-206ENST00000525303 PYROXD2Q8N2H3 581 aa9.64□□□□□ -0.87
TRAPPC4-206ENST00000525303 Q8N9G6 341 aaPredicted RBP9.64□□□□□ -0.87
TRAPPC4-206ENST00000525303 OR6C4Q8NGE1 309 aa9.64□□□□□ -0.87
TRAPPC4-206ENST00000525303 SLC30A5Q8TAD4 765 aa9.64□□□□□ -0.87
TRAPPC4-206ENST00000525303 FAM172AQ8WUF8 416 aa9.64□□□□□ -0.87
TRAPPC4-206ENST00000525303 CASKIN2Q8WXE0 1202 aa9.64□□□□□ -0.87
TRAPPC4-206ENST00000525303 CENPIQ92674 756 aaPredicted RBP9.64□□□□□ -0.87
TRAPPC4-206ENST00000525303 HMCESQ96FZ2 354 aa9.64□□□□□ -0.87
TRAPPC4-206ENST00000525303 PDXPQ96GD0 296 aa9.64□□□□□ -0.87
TRAPPC4-206ENST00000525303 NHEJ1Q9H9Q4 299 aaPredicted RBP9.64□□□□□ -0.87
TRAPPC4-206ENST00000525303 LHX3Q9UBR4 397 aa9.64□□□□□ -0.87
TRAPPC4-206ENST00000525303 KLQ9UEF7 1012 aa9.64□□□□□ -0.87
TRAPPC4-206ENST00000525303 MFHAS1Q9Y4C4 1052 aa9.64□□□□□ -0.87
TRAPPC4-206ENST00000525303 LOXL2Q9Y4K0 774 aa9.64□□□□□ -0.87
TRAPPC4-206ENST00000525303 SCINQ9Y6U3 715 aa9.64□□□□□ -0.87
TRAPPC4-206ENST00000525303 RELNP78509 3460 aa9.63□□□□□ -0.87
TRAPPC4-206ENST00000525303 PRAMEF33A0A0G2JMD5 474 aa9.63□□□□□ -0.87
TRAPPC4-206ENST00000525303 RASA4BC9J798 803 aa9.63□□□□□ -0.87
TRAPPC4-206ENST00000525303 DDX3XO00571 662 aaKnown RBP eCLIP9.63□□□□□ -0.878e-12■■■■□ 21.2
TRAPPC4-206ENST00000525303 NVLO15381 856 aaKnown RBP9.63□□□□□ -0.87
TRAPPC4-206ENST00000525303 RASA4O43374 803 aa9.63□□□□□ -0.87
TRAPPC4-206ENST00000525303 PRAMEF10O60809 474 aa9.63□□□□□ -0.87
TRAPPC4-206ENST00000525303 TNFP01375 233 aa9.63□□□□□ -0.87
TRAPPC4-206ENST00000525303 FTLP02792 175 aaPredicted RBP9.63□□□□□ -0.87
TRAPPC4-206ENST00000525303 ITGB2P05107 769 aa9.63□□□□□ -0.87
TRAPPC4-206ENST00000525303 PRKCGP05129 697 aa9.63□□□□□ -0.87
TRAPPC4-206ENST00000525303 FECHP22830 423 aa9.63□□□□□ -0.87
TRAPPC4-206ENST00000525303 EPHB2P29323 1055 aa9.63□□□□□ -0.87
TRAPPC4-206ENST00000525303 ETV5P41161 510 aa9.63□□□□□ -0.87
TRAPPC4-206ENST00000525303 LIG3P49916 1009 aa9.63□□□□□ -0.87
TRAPPC4-206ENST00000525303 SUOXP51687 545 aa9.63□□□□□ -0.87
TRAPPC4-206ENST00000525303 UGP2Q16851 508 aa9.63□□□□□ -0.87
TRAPPC4-206ENST00000525303 MANEAQ5SRI9 462 aa9.63□□□□□ -0.87
TRAPPC4-206ENST00000525303 CCDC122Q5T0U0 273 aa9.63□□□□□ -0.87
TRAPPC4-206ENST00000525303 MON1BQ7L1V2 547 aa9.63□□□□□ -0.87
TRAPPC4-206ENST00000525303 SLFN11Q7Z7L1 901 aa9.63□□□□□ -0.87
TRAPPC4-206ENST00000525303 VASH2Q86V25 355 aa9.63□□□□□ -0.87
TRAPPC4-206ENST00000525303 CCNJLQ8IV13 435 aa9.63□□□□□ -0.87
TRAPPC4-206ENST00000525303 SFTPA2Q8IWL1 248 aa9.63□□□□□ -0.87
TRAPPC4-206ENST00000525303 MCOLN2Q8IZK6 566 aa9.63□□□□□ -0.87
TRAPPC4-206ENST00000525303 RTL3Q8N8U3 475 aaKnown RBP9.63□□□□□ -0.87
TRAPPC4-206ENST00000525303 C3orf20Q8ND61 904 aa9.63□□□□□ -0.87
TRAPPC4-206ENST00000525303 GPR156Q8NFN8 814 aa9.63□□□□□ -0.87
TRAPPC4-206ENST00000525303 ATL2Q8NHH9 583 aa9.63□□□□□ -0.87
TRAPPC4-206ENST00000525303 NTAN1Q96AB6 310 aa9.63□□□□□ -0.87
TRAPPC4-206ENST00000525303 WDR92Q96MX6 357 aa9.63□□□□□ -0.87
TRAPPC4-206ENST00000525303 RBM15Q96T37 977 aaKnown RBP eCLIP9.63□□□□□ -0.87
TRAPPC4-206ENST00000525303 PCDHB18PQ96TA0 734 aa9.63□□□□□ -0.87
TRAPPC4-206ENST00000525303 BAG1Q99933 345 aaPredicted RBP9.63□□□□□ -0.87
TRAPPC4-206ENST00000525303 ISCUQ9H1K1 167 aa9.63□□□□□ -0.87
TRAPPC4-206ENST00000525303 SUV39H2Q9H5I1 410 aa9.63□□□□□ -0.87
TRAPPC4-206ENST00000525303 MRPL47Q9HD33 250 aaKnown RBP9.63□□□□□ -0.87
TRAPPC4-206ENST00000525303 PCDH12Q9NPG4 1184 aa9.63□□□□□ -0.87
TRAPPC4-206ENST00000525303 STARD5Q9NSY2 213 aa9.63□□□□□ -0.87
TRAPPC4-206ENST00000525303 PARVAQ9NVD7 372 aa9.63□□□□□ -0.87
TRAPPC4-206ENST00000525303 IL17BQ9UHF5 180 aa9.63□□□□□ -0.87
TRAPPC4-206ENST00000525303 LCMT1Q9UIC8 334 aa9.63□□□□□ -0.87
TRAPPC4-206ENST00000525303 APPL1Q9UKG1 709 aa9.63□□□□□ -0.87
TRAPPC4-206ENST00000525303 ZNF106Q9H2Y7 1883 aaKnown RBP9.62□□□□□ -0.87
TRAPPC4-206ENST00000525303 A0A087X0T9 212 aa9.62□□□□□ -0.87
TRAPPC4-206ENST00000525303 TSPAN11A1L157 253 aa9.62□□□□□ -0.87
TRAPPC4-206ENST00000525303 TMEM202A6NGA9 273 aa9.62□□□□□ -0.87
TRAPPC4-206ENST00000525303 TMCO5BA8MYB1 307 aa9.62□□□□□ -0.87
TRAPPC4-206ENST00000525303 CREB3O43889 395 aa9.62□□□□□ -0.87
TRAPPC4-206ENST00000525303 FAM87AP0C7U9 286 aa9.62□□□□□ -0.87
TRAPPC4-206ENST00000525303 FAM228BP0C875 321 aa9.62□□□□□ -0.87
TRAPPC4-206ENST00000525303 KRT3P12035 628 aa9.62□□□□□ -0.87
TRAPPC4-206ENST00000525303 GLB1P16278 677 aa9.62□□□□□ -0.87
TRAPPC4-206ENST00000525303 ITGB6P18564 788 aa9.62□□□□□ -0.87
TRAPPC4-206ENST00000525303 GPD1P21695 349 aa9.62□□□□□ -0.87
TRAPPC4-206ENST00000525303 RFC1P35251 1148 aaPredicted RBP9.62□□□□□ -0.87
TRAPPC4-206ENST00000525303 MMP12P39900 470 aa9.62□□□□□ -0.87
TRAPPC4-206ENST00000525303 MAPK10P53779 464 aa9.62□□□□□ -0.87
TRAPPC4-206ENST00000525303 YBEYP58557 167 aaPredicted RBP9.62□□□□□ -0.87
TRAPPC4-206ENST00000525303 ZFP36L1Q07352 338 aaKnown RBP9.62□□□□□ -0.87
TRAPPC4-206ENST00000525303 MTM1Q13496 603 aa9.62□□□□□ -0.87
TRAPPC4-206ENST00000525303 SERINC3Q13530 473 aa9.62□□□□□ -0.87
TRAPPC4-206ENST00000525303 AGERQ15109 404 aa9.62□□□□□ -0.87
TRAPPC4-206ENST00000525303 CYTH1Q15438 398 aa9.62□□□□□ -0.87
TRAPPC4-206ENST00000525303 SPA17Q15506 151 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms