RNA–Protein interactions for RNA: ENST00000525132.1

CSDE1-209, Transcript of cold shock domain containing E1, humanhuman

TSL 5

Gene CSDE1, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-209ENST00000525132 RSPH9Q9H1X1 276 aaPredicted RBP3.29□□□□□ -1.88
CSDE1-209ENST00000525132 CALCOCO1Q9P1Z2 691 aa3.29□□□□□ -1.88
CSDE1-209ENST00000525132 KIF17Q9P2E2 1029 aa3.29□□□□□ -1.88
CSDE1-209ENST00000525132 AFF4Q9UHB7 1163 aaKnown RBP3.29□□□□□ -1.88
CSDE1-209ENST00000525132 FAT4Q6V0I7 4981 aa3.29□□□□□ -1.88
CSDE1-209ENST00000525132 HECTD4Q9Y4D8 3996 aa3.29□□□□□ -1.88
CSDE1-209ENST00000525132 DOCK9Q9BZ29 2069 aa3.29□□□□□ -1.88
CSDE1-209ENST00000525132 A0A1B0GVT2 93 aa3.28□□□□□ -1.88
CSDE1-209ENST00000525132 PODXLO00592 558 aa3.28□□□□□ -1.88
CSDE1-209ENST00000525132 PIP5K1BO14986 540 aa3.28□□□□□ -1.88
CSDE1-209ENST00000525132 CCL16O15467 120 aa3.28□□□□□ -1.88
CSDE1-209ENST00000525132 HOXC11O43248 304 aaPredicted RBP3.28□□□□□ -1.88
CSDE1-209ENST00000525132 TIPRLO75663 272 aa3.28□□□□□ -1.88
CSDE1-209ENST00000525132 MT-ND5P03915 603 aa3.28□□□□□ -1.88
CSDE1-209ENST00000525132 TXNP10599 105 aaKnown RBP3.28□□□□□ -1.88
CSDE1-209ENST00000525132 VDRP11473 427 aa3.28□□□□□ -1.88
CSDE1-209ENST00000525132 INSRRP14616 1297 aa3.28□□□□□ -1.88
CSDE1-209ENST00000525132 DNASE1P24855 282 aa3.28□□□□□ -1.88
CSDE1-209ENST00000525132 BTDP43251 543 aa3.28□□□□□ -1.88
CSDE1-209ENST00000525132 RAD52P43351 418 aa3.28□□□□□ -1.88
CSDE1-209ENST00000525132 ALDH1A3P47895 512 aa3.28□□□□□ -1.88
CSDE1-209ENST00000525132 DGCR2P98153 550 aa3.28□□□□□ -1.88
CSDE1-209ENST00000525132 MGAT3Q09327 533 aa3.28□□□□□ -1.88
CSDE1-209ENST00000525132 Q0VFX4 171 aa3.28□□□□□ -1.88
CSDE1-209ENST00000525132 SNTB1Q13884 538 aaKnown RBP3.28□□□□□ -1.88
CSDE1-209ENST00000525132 RAB39AQ14964 217 aa3.28□□□□□ -1.88
CSDE1-209ENST00000525132 TAF7Q15545 349 aaPredicted RBP3.28□□□□□ -1.88
CSDE1-209ENST00000525132 SLC5A9Q2M3M2 681 aa3.28□□□□□ -1.88
CSDE1-209ENST00000525132 CCDC57Q2TAC2 916 aa3.28□□□□□ -1.88
CSDE1-209ENST00000525132 KIF19Q2TAC6 998 aa3.28□□□□□ -1.88
CSDE1-209ENST00000525132 ADCK5Q3MIX3 580 aa3.28□□□□□ -1.88
CSDE1-209ENST00000525132 FLYWCH1Q4VC44 716 aa3.28□□□□□ -1.88
CSDE1-209ENST00000525132 FAM102AQ5T9C2 384 aaPredicted RBP3.28□□□□□ -1.88
CSDE1-209ENST00000525132 RRAGBQ5VZM2 374 aa3.28□□□□□ -1.88
CSDE1-209ENST00000525132 FBXO38Q6PIJ6 1188 aa3.28□□□□□ -1.88
CSDE1-209ENST00000525132 RNF44Q7L0R7 432 aa3.28□□□□□ -1.88
CSDE1-209ENST00000525132 CHST3Q7LGC8 479 aa3.28□□□□□ -1.88
CSDE1-209ENST00000525132 LRRTM4Q86VH4 590 aa3.28□□□□□ -1.88
CSDE1-209ENST00000525132 PPP1R3BQ86XI6 285 aa3.28□□□□□ -1.88
CSDE1-209ENST00000525132 PLXDC1Q8IUK5 500 aa3.28□□□□□ -1.88
CSDE1-209ENST00000525132 MFSD6LQ8IWD5 586 aa3.28□□□□□ -1.88
CSDE1-209ENST00000525132 WDR63Q8IWG1 891 aa3.28□□□□□ -1.88
CSDE1-209ENST00000525132 ZCCHC9Q8N567 271 aaKnown RBP3.28□□□□□ -1.88
CSDE1-209ENST00000525132 EID2Q8N6I1 236 aa3.28□□□□□ -1.88
CSDE1-209ENST00000525132 FANCBQ8NB91 859 aa3.28□□□□□ -1.88
CSDE1-209ENST00000525132 OR5M3Q8NGP4 307 aa3.28□□□□□ -1.88
CSDE1-209ENST00000525132 OR6B3Q8NGW1 331 aa3.28□□□□□ -1.88
CSDE1-209ENST00000525132 CCHCR1Q8TD31 782 aa3.28□□□□□ -1.88
CSDE1-209ENST00000525132 BRIX1Q8TDN6 353 aaKnown RBP3.28□□□□□ -1.88
CSDE1-209ENST00000525132 IPO4Q8TEX9 1081 aaKnown RBP3.28□□□□□ -1.88
CSDE1-209ENST00000525132 STYXQ8WUJ0 223 aa3.28□□□□□ -1.88
CSDE1-209ENST00000525132 CENPIQ92674 756 aaPredicted RBP3.28□□□□□ -1.88
CSDE1-209ENST00000525132 IGSF21Q96ID5 467 aa3.28□□□□□ -1.88
CSDE1-209ENST00000525132 RSRC1Q96IZ7 334 aaKnown RBP3.28□□□□□ -1.88
CSDE1-209ENST00000525132 TMX3Q96JJ7 454 aa3.28□□□□□ -1.88
CSDE1-209ENST00000525132 PYM1Q9BRP8 204 aaKnown RBP3.28□□□□□ -1.88
CSDE1-209ENST00000525132 CHCHD6Q9BRQ6 235 aa3.28□□□□□ -1.88
CSDE1-209ENST00000525132 KATNAL1Q9BW62 490 aa3.28□□□□□ -1.88
CSDE1-209ENST00000525132 GPR87Q9BY21 358 aa3.28□□□□□ -1.88
CSDE1-209ENST00000525132 EIF2AQ9BY44 585 aaKnown RBP3.28□□□□□ -1.88
CSDE1-209ENST00000525132 TNMDQ9H2S6 317 aa3.28□□□□□ -1.88
CSDE1-209ENST00000525132 DHX36Q9H2U1 1008 aaKnown RBP3.28□□□□□ -1.88
CSDE1-209ENST00000525132 WDCPQ9H6R7 721 aa3.28□□□□□ -1.88
CSDE1-209ENST00000525132 MANSC1Q9H8J5 431 aa3.28□□□□□ -1.88
CSDE1-209ENST00000525132 JMJD4Q9H9V9 463 aa3.28□□□□□ -1.88
CSDE1-209ENST00000525132 MRPL17Q9NRX2 175 aaKnown RBP3.28□□□□□ -1.88
CSDE1-209ENST00000525132 HELLSQ9NRZ9 838 aa3.28□□□□□ -1.88
CSDE1-209ENST00000525132 LANCL2Q9NS86 450 aa3.28□□□□□ -1.88
CSDE1-209ENST00000525132 OLA1Q9NTK5 396 aaKnown RBP3.28□□□□□ -1.88
CSDE1-209ENST00000525132 TBC1D23Q9NUY8 699 aa3.28□□□□□ -1.88
CSDE1-209ENST00000525132 AASSQ9UDR5 926 aa3.28□□□□□ -1.88
CSDE1-209ENST00000525132 FEZ2Q9UHY8 353 aaPredicted RBP3.28□□□□□ -1.88
CSDE1-209ENST00000525132 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP3.28□□□□□ -1.887e-9■■□□□ 13.3
CSDE1-209ENST00000525132 ARID2Q68CP9 1835 aa3.28□□□□□ -1.88
CSDE1-209ENST00000525132 A0A1W2PRQ8 180 aa3.27□□□□□ -1.89
CSDE1-209ENST00000525132 FAM234BA2RU67 622 aa3.27□□□□□ -1.89
CSDE1-209ENST00000525132 ANTXRLA6NF34 631 aa3.27□□□□□ -1.89
CSDE1-209ENST00000525132 LEFTY2O00292 366 aa3.27□□□□□ -1.89
CSDE1-209ENST00000525132 BTN3A1O00481 513 aa3.27□□□□□ -1.89
CSDE1-209ENST00000525132 SOAT2O75908 522 aa3.27□□□□□ -1.89
CSDE1-209ENST00000525132 TNFRSF6BO95407 300 aa3.27□□□□□ -1.89
CSDE1-209ENST00000525132 NDST3O95803 873 aa3.27□□□□□ -1.89
CSDE1-209ENST00000525132 TBX18O95935 607 aa3.27□□□□□ -1.89
CSDE1-209ENST00000525132 LIPCP11150 499 aa3.27□□□□□ -1.89
CSDE1-209ENST00000525132 CEBPBP17676 345 aa3.27□□□□□ -1.89
CSDE1-209ENST00000525132 GNAT2P19087 354 aa3.27□□□□□ -1.89
CSDE1-209ENST00000525132 HDCP19113 662 aa3.27□□□□□ -1.89
CSDE1-209ENST00000525132 TACR2P21452 398 aa3.27□□□□□ -1.89
CSDE1-209ENST00000525132 RPS6KB1P23443 525 aa3.27□□□□□ -1.89
CSDE1-209ENST00000525132 KRTAP5-9P26371 169 aa3.27□□□□□ -1.89
CSDE1-209ENST00000525132 KRT20P35900 424 aa3.27□□□□□ -1.89
CSDE1-209ENST00000525132 LIFRP42702 1097 aa3.27□□□□□ -1.89
CSDE1-209ENST00000525132 ARFIP2P53365 341 aa3.27□□□□□ -1.89
CSDE1-209ENST00000525132 CLNS1AP54105 237 aaKnown RBP3.27□□□□□ -1.89
CSDE1-209ENST00000525132 NR1H2P55055 460 aa3.27□□□□□ -1.89
CSDE1-209ENST00000525132 CSNK1G2P78368 415 aa3.27□□□□□ -1.89
CSDE1-209ENST00000525132 FAM189BP81408 668 aa3.27□□□□□ -1.89
CSDE1-209ENST00000525132 E2F1Q01094 437 aa3.27□□□□□ -1.89
CSDE1-209ENST00000525132 MAPK7Q13164 816 aa3.27□□□□□ -1.89
CSDE1-209ENST00000525132 TRPC3Q13507 836 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms