RNA–Protein interactions for RNA: ENST00000525064.5

CLNS1A-202, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3 BASIC

Gene CLNS1A, Length 1,121 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-202ENST00000525064 TNFP01375 233 aa11.85□□□□□ -0.51
CLNS1A-202ENST00000525064 CD48P09326 243 aa11.85□□□□□ -0.51
CLNS1A-202ENST00000525064 ALPIP09923 528 aa11.85□□□□□ -0.51
CLNS1A-202ENST00000525064 MYBL1P10243 752 aa11.85□□□□□ -0.51
CLNS1A-202ENST00000525064 LHCGRP22888 699 aa11.85□□□□□ -0.51
CLNS1A-202ENST00000525064 HTR1BP28222 390 aa11.85□□□□□ -0.51
CLNS1A-202ENST00000525064 BLKP51451 505 aa11.85□□□□□ -0.51
CLNS1A-202ENST00000525064 ERVPABLB-1P60509 514 aa11.85□□□□□ -0.51
CLNS1A-202ENST00000525064 AP1S1P61966 158 aa11.85□□□□□ -0.51
CLNS1A-202ENST00000525064 SKOR1P84550 965 aa11.85□□□□□ -0.51
CLNS1A-202ENST00000525064 FANCCQ00597 558 aa11.85□□□□□ -0.51
CLNS1A-202ENST00000525064 NSUN2Q08J23 767 aaKnown RBP eCLIP11.85□□□□□ -0.51
CLNS1A-202ENST00000525064 MMRN1Q13201 1228 aa11.85□□□□□ -0.51
CLNS1A-202ENST00000525064 SPIDRQ14159 915 aa11.85□□□□□ -0.51
CLNS1A-202ENST00000525064 ZNF235Q14590 738 aa11.85□□□□□ -0.51
CLNS1A-202ENST00000525064 FIGNQ5HY92 759 aa11.85□□□□□ -0.51
CLNS1A-202ENST00000525064 TMCO3Q6UWJ1 677 aa11.85□□□□□ -0.51
CLNS1A-202ENST00000525064 GPR155Q7Z3F1 870 aa11.85□□□□□ -0.51
CLNS1A-202ENST00000525064 GKN2Q86XP6 184 aa11.85□□□□□ -0.51
CLNS1A-202ENST00000525064 LSMEM2Q8N112 164 aa11.85□□□□□ -0.51
CLNS1A-202ENST00000525064 PAF1Q8N7H5 531 aa11.85□□□□□ -0.51
CLNS1A-202ENST00000525064 GPR156Q8NFN8 814 aa11.85□□□□□ -0.51
CLNS1A-202ENST00000525064 OR56A4Q8NGH8 313 aa11.85□□□□□ -0.51
CLNS1A-202ENST00000525064 TPCN2Q8NHX9 752 aa11.85□□□□□ -0.51
CLNS1A-202ENST00000525064 PTCD2Q8WV60 388 aaKnown RBP11.85□□□□□ -0.51
CLNS1A-202ENST00000525064 KCNE4Q8WWG9 221 aa11.85□□□□□ -0.51
CLNS1A-202ENST00000525064 COQ10AQ96MF6 247 aa11.85□□□□□ -0.51
CLNS1A-202ENST00000525064 ZNF599Q96NL3 588 aa11.85□□□□□ -0.51
CLNS1A-202ENST00000525064 SMIM14Q96QK8 99 aa11.85□□□□□ -0.51
CLNS1A-202ENST00000525064 NUDCD1Q96RS6 583 aa11.85□□□□□ -0.51
CLNS1A-202ENST00000525064 MGME1Q9BQP7 344 aa11.85□□□□□ -0.51
CLNS1A-202ENST00000525064 SUDS3Q9H7L9 328 aaPredicted RBP11.85□□□□□ -0.51
CLNS1A-202ENST00000525064 NOD2Q9HC29 1040 aa11.85□□□□□ -0.51
CLNS1A-202ENST00000525064 MRPL47Q9HD33 250 aaKnown RBP11.85□□□□□ -0.51
CLNS1A-202ENST00000525064 DGKBQ9Y6T7 804 aa11.85□□□□□ -0.51
CLNS1A-202ENST00000525064 A0A087X0T9 212 aa11.84□□□□□ -0.51
CLNS1A-202ENST00000525064 SYCE3A1L190 88 aa11.84□□□□□ -0.51
CLNS1A-202ENST00000525064 CFAP69A5D8W1 941 aa11.84□□□□□ -0.51
CLNS1A-202ENST00000525064 NPIPB15A6NHN6 443 aaPredicted RBP11.84□□□□□ -0.51
CLNS1A-202ENST00000525064 CDRT15L2A8MXV6 281 aa11.84□□□□□ -0.51
CLNS1A-202ENST00000525064 D6RAR5 112 aa11.84□□□□□ -0.51
CLNS1A-202ENST00000525064 HAX1O00165 279 aa11.84□□□□□ -0.51
CLNS1A-202ENST00000525064 AGRPO00253 132 aa11.84□□□□□ -0.51
CLNS1A-202ENST00000525064 CACNB4O00305 520 aaPredicted RBP11.84□□□□□ -0.51
CLNS1A-202ENST00000525064 ATXN7O15265 892 aaPredicted RBP11.84□□□□□ -0.51
CLNS1A-202ENST00000525064 KLK10O43240 276 aa11.84□□□□□ -0.51
CLNS1A-202ENST00000525064 MFSD11O43934 449 aa11.84□□□□□ -0.51
CLNS1A-202ENST00000525064 NOBOXO60393 691 aa11.84□□□□□ -0.51
CLNS1A-202ENST00000525064 CPP00450 1065 aa11.84□□□□□ -0.51
CLNS1A-202ENST00000525064 RPLP0P05388 317 aaKnown RBP11.84□□□□□ -0.51
CLNS1A-202ENST00000525064 FAM228BP0C875 321 aa11.84□□□□□ -0.51
CLNS1A-202ENST00000525064 TRIM23P36406 574 aa11.84□□□□□ -0.51
CLNS1A-202ENST00000525064 ARL4AP40617 200 aa11.84□□□□□ -0.51
CLNS1A-202ENST00000525064 RENBPP51606 427 aa11.84□□□□□ -0.51
CLNS1A-202ENST00000525064 ZNF135P52742 658 aaPredicted RBP11.84□□□□□ -0.51
CLNS1A-202ENST00000525064 ACOX1Q15067 660 aa11.84□□□□□ -0.51
CLNS1A-202ENST00000525064 DENND2CQ68D51 928 aa11.84□□□□□ -0.51
CLNS1A-202ENST00000525064 PNCKQ6P2M8 343 aa11.84□□□□□ -0.51
CLNS1A-202ENST00000525064 LVRNQ6Q4G3 990 aa11.84□□□□□ -0.51
CLNS1A-202ENST00000525064 IGF2-ASQ6U949 168 aa11.84□□□□□ -0.51
CLNS1A-202ENST00000525064 RFLNAQ6ZTI6 216 aa11.84□□□□□ -0.51
CLNS1A-202ENST00000525064 HSD11B1LQ7Z5J1 315 aa11.84□□□□□ -0.51
CLNS1A-202ENST00000525064 TSPAN33Q86UF1 283 aa11.84□□□□□ -0.51
CLNS1A-202ENST00000525064 LZTR1Q8N653 840 aa11.84□□□□□ -0.51
CLNS1A-202ENST00000525064 NIPA2Q8N8Q9 360 aa11.84□□□□□ -0.51
CLNS1A-202ENST00000525064 PDCD6IPQ8WUM4 868 aaKnown RBP11.84□□□□□ -0.51
CLNS1A-202ENST00000525064 SLC39A7Q92504 469 aa11.84□□□□□ -0.51
CLNS1A-202ENST00000525064 NUS1Q96E22 293 aa11.84□□□□□ -0.51
CLNS1A-202ENST00000525064 SLC46A1Q96NT5 459 aa11.84□□□□□ -0.51
CLNS1A-202ENST00000525064 NUP85Q9BW27 656 aa11.84□□□□□ -0.51
CLNS1A-202ENST00000525064 FOXP3Q9BZS1 431 aa11.84□□□□□ -0.51
CLNS1A-202ENST00000525064 TMEM168Q9H0V1 697 aa11.84□□□□□ -0.51
CLNS1A-202ENST00000525064 CYP4F12Q9HCS2 524 aa11.84□□□□□ -0.51
CLNS1A-202ENST00000525064 THSD1Q9NS62 852 aa11.84□□□□□ -0.51
CLNS1A-202ENST00000525064 MOSPD1Q9UJG1 213 aa11.84□□□□□ -0.51
CLNS1A-202ENST00000525064 ANAPC7Q9UJX3 599 aa11.84□□□□□ -0.51
CLNS1A-202ENST00000525064 PCDHGA8Q9Y5G5 932 aa11.84□□□□□ -0.51
CLNS1A-202ENST00000525064 AHCTF1Q8WYP5 2266 aa11.83□□□□□ -0.52
CLNS1A-202ENST00000525064 CCDC187A0A096LP49 1063 aa11.83□□□□□ -0.52
CLNS1A-202ENST00000525064 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.83□□□□□ -0.52
CLNS1A-202ENST00000525064 A0A1W2PQJ5 194 aa11.83□□□□□ -0.52
CLNS1A-202ENST00000525064 PRSS38A1L453 326 aa11.83□□□□□ -0.52
CLNS1A-202ENST00000525064 EIF4E1BA6NMX2 242 aaKnown RBP11.83□□□□□ -0.52
CLNS1A-202ENST00000525064 B4DGG1 531 aa11.83□□□□□ -0.52
CLNS1A-202ENST00000525064 SOCS5O75159 536 aa11.83□□□□□ -0.52
CLNS1A-202ENST00000525064 HEXIM1O94992 359 aaKnown RBP11.83□□□□□ -0.52
CLNS1A-202ENST00000525064 TNFSF15O95150 251 aa11.83□□□□□ -0.52
CLNS1A-202ENST00000525064 MAP3K6O95382 1288 aa11.83□□□□□ -0.52
CLNS1A-202ENST00000525064 FUCA1P04066 466 aa11.83□□□□□ -0.52
CLNS1A-202ENST00000525064 HGFP14210 728 aa11.83□□□□□ -0.52
CLNS1A-202ENST00000525064 CTPS1P17812 591 aa11.83□□□□□ -0.52
CLNS1A-202ENST00000525064 IL4RP24394 825 aa11.83□□□□□ -0.52
CLNS1A-202ENST00000525064 VIPR1P32241 457 aa11.83□□□□□ -0.52
CLNS1A-202ENST00000525064 GJC1P36383 396 aa11.83□□□□□ -0.52
CLNS1A-202ENST00000525064 ETV3P41162 512 aa11.83□□□□□ -0.52
CLNS1A-202ENST00000525064 ARSEP51690 589 aa11.83□□□□□ -0.52
CLNS1A-202ENST00000525064 CDH6P55285 790 aa11.83□□□□□ -0.52
CLNS1A-202ENST00000525064 PIGHQ14442 188 aaPredicted RBP11.83□□□□□ -0.52
CLNS1A-202ENST00000525064 IHHQ14623 411 aa11.83□□□□□ -0.52
CLNS1A-202ENST00000525064 ATP13A4Q4VNC1 1196 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms