RNA–Protein interactions for RNA: ENST00000524927.1

NEDD8-203, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2 BASIC

Gene NEDD8, Length 653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-203ENST00000524927 CCDC187A0A096LP49 1063 aa7.25□□□□□ -1.25
NEDD8-203ENST00000524927 SMIM28A0A1B0GU29 152 aa7.25□□□□□ -1.25
NEDD8-203ENST00000524927 UBE2QL1A1L167 161 aa7.25□□□□□ -1.25
NEDD8-203ENST00000524927 TRIM38O00635 465 aa7.25□□□□□ -1.25
NEDD8-203ENST00000524927 TEX33O43247 280 aa7.25□□□□□ -1.25
NEDD8-203ENST00000524927 TULP3O75386 442 aa7.25□□□□□ -1.25
NEDD8-203ENST00000524927 ACADMP11310 421 aa7.25□□□□□ -1.25
NEDD8-203ENST00000524927 CAPN3P20807 821 aa7.25□□□□□ -1.25
NEDD8-203ENST00000524927 PEX2P28328 305 aa7.25□□□□□ -1.25
NEDD8-203ENST00000524927 GZMKP49863 264 aa7.25□□□□□ -1.25
NEDD8-203ENST00000524927 PDE6CP51160 858 aa7.25□□□□□ -1.25
NEDD8-203ENST00000524927 CTXN1P60606 82 aa7.25□□□□□ -1.25
NEDD8-203ENST00000524927 ADAM8P78325 824 aa7.25□□□□□ -1.25
NEDD8-203ENST00000524927 GAD2Q05329 585 aa7.25□□□□□ -1.25
NEDD8-203ENST00000524927 MTM1Q13496 603 aa7.25□□□□□ -1.25
NEDD8-203ENST00000524927 SEMA5AQ13591 1074 aa7.25□□□□□ -1.25
NEDD8-203ENST00000524927 MGAT5BQ3V5L5 792 aa7.25□□□□□ -1.25
NEDD8-203ENST00000524927 FUT11Q495W5 492 aa7.25□□□□□ -1.25
NEDD8-203ENST00000524927 ZKSCAN2Q63HK3 967 aa7.25□□□□□ -1.25
NEDD8-203ENST00000524927 ARHGEF18Q6ZSZ5 1173 aa7.25□□□□□ -1.25
NEDD8-203ENST00000524927 ZNF572Q7Z3I7 529 aaPredicted RBP7.25□□□□□ -1.25
NEDD8-203ENST00000524927 ITPRIPQ8IWB1 547 aa7.25□□□□□ -1.25
NEDD8-203ENST00000524927 MAPK15Q8TD08 544 aa7.25□□□□□ -1.25
NEDD8-203ENST00000524927 CASKIN2Q8WXE0 1202 aa7.25□□□□□ -1.25
NEDD8-203ENST00000524927 PRCCQ92733 491 aaPredicted RBP7.25□□□□□ -1.25
NEDD8-203ENST00000524927 SIPA1Q96FS4 1042 aa7.25□□□□□ -1.25
NEDD8-203ENST00000524927 TNIP3Q96KP6 325 aa7.25□□□□□ -1.25
NEDD8-203ENST00000524927 NT5C1BQ96P26 610 aa7.25□□□□□ -1.25
NEDD8-203ENST00000524927 SLC22A12Q96S37 553 aa7.25□□□□□ -1.25
NEDD8-203ENST00000524927 USP29Q9HBJ7 922 aa7.25□□□□□ -1.25
NEDD8-203ENST00000524927 RIC8AQ9NPQ8 531 aa7.25□□□□□ -1.25
NEDD8-203ENST00000524927 GCNT4Q9P109 453 aa7.25□□□□□ -1.25
NEDD8-203ENST00000524927 PRRC2CQ9Y520 2896 aaKnown RBP7.25□□□□□ -1.25
NEDD8-203ENST00000524927 DCHS2Q6V1P9 2916 aa7.24□□□□□ -1.25
NEDD8-203ENST00000524927 TP53BP1Q12888 1972 aaPredicted RBP7.24□□□□□ -1.25
NEDD8-203ENST00000524927 OBSL1O75147 1896 aa7.24□□□□□ -1.25
NEDD8-203ENST00000524927 NSD1Q96L73 2696 aaPredicted RBP7.24□□□□□ -1.25
NEDD8-203ENST00000524927 A0A1W2PPL8 197 aa7.24□□□□□ -1.25
NEDD8-203ENST00000524927 A0A1W2PRX2 142 aa7.24□□□□□ -1.25
NEDD8-203ENST00000524927 M0QZQ0 153 aa7.24□□□□□ -1.25
NEDD8-203ENST00000524927 NVLO15381 856 aaKnown RBP7.24□□□□□ -1.25
NEDD8-203ENST00000524927 TCEA3O75764 348 aa7.24□□□□□ -1.25
NEDD8-203ENST00000524927 RARGP13631 454 aa7.24□□□□□ -1.25
NEDD8-203ENST00000524927 QARSP47897 775 aaKnown RBP7.24□□□□□ -1.25
NEDD8-203ENST00000524927 EIF3IQ13347 325 aaKnown RBP7.24□□□□□ -1.25
NEDD8-203ENST00000524927 RIN1Q13671 783 aa7.24□□□□□ -1.25
NEDD8-203ENST00000524927 DHX8Q14562 1220 aaKnown RBP7.24□□□□□ -1.25
NEDD8-203ENST00000524927 MCMDC2Q4G0Z9 681 aa7.24□□□□□ -1.25
NEDD8-203ENST00000524927 FLYWCH1Q4VC44 716 aa7.24□□□□□ -1.25
NEDD8-203ENST00000524927 ZC2HC1CQ53FD0 456 aaPredicted RBP7.24□□□□□ -1.25
NEDD8-203ENST00000524927 HS1BP3Q53T59 392 aa7.24□□□□□ -1.25
NEDD8-203ENST00000524927 AFMIDQ63HM1 303 aa7.24□□□□□ -1.25
NEDD8-203ENST00000524927 PLA2G4FQ68DD2 849 aa7.24□□□□□ -1.25
NEDD8-203ENST00000524927 ARMCX5Q6P1M9 558 aa7.24□□□□□ -1.25
NEDD8-203ENST00000524927 RBM44Q6ZP01 1051 aaKnown RBP7.24□□□□□ -1.25
NEDD8-203ENST00000524927 ADGRE4PQ86SQ3 457 aa7.24□□□□□ -1.25
NEDD8-203ENST00000524927 TMPRSS6Q8IU80 811 aa7.24□□□□□ -1.25
NEDD8-203ENST00000524927 LGI4Q8N135 537 aa7.24□□□□□ -1.25
NEDD8-203ENST00000524927 CFHR4Q92496 578 aa7.24□□□□□ -1.25
NEDD8-203ENST00000524927 ELAC2Q9BQ52 826 aaKnown RBP7.24□□□□□ -1.25
NEDD8-203ENST00000524927 WDCPQ9H6R7 721 aa7.24□□□□□ -1.25
NEDD8-203ENST00000524927 ZMAT3Q9HA38 289 aaKnown RBP7.24□□□□□ -1.25
NEDD8-203ENST00000524927 TRPC7Q9HCX4 862 aa7.24□□□□□ -1.25
NEDD8-203ENST00000524927 SARS2Q9NP81 518 aaKnown RBP7.24□□□□□ -1.25
NEDD8-203ENST00000524927 UXTQ9UBK9 157 aaPredicted RBP7.24□□□□□ -1.25
NEDD8-203ENST00000524927 SHANK1Q9Y566 2161 aa7.23□□□□□ -1.25
NEDD8-203ENST00000524927 EFCAB7A8K855 629 aa7.23□□□□□ -1.25
NEDD8-203ENST00000524927 LEFTY2O00292 366 aa7.23□□□□□ -1.25
NEDD8-203ENST00000524927 HOXC11O43248 304 aaPredicted RBP7.23□□□□□ -1.25
NEDD8-203ENST00000524927 CHMP2AO43633 222 aa7.23□□□□□ -1.25
NEDD8-203ENST00000524927 JAK2O60674 1132 aa7.23□□□□□ -1.25
NEDD8-203ENST00000524927 CDC14BO60729 498 aa7.23□□□□□ -1.25
NEDD8-203ENST00000524927 SEMA4FO95754 770 aa7.23□□□□□ -1.25
NEDD8-203ENST00000524927 WNT1P04628 370 aa7.23□□□□□ -1.25
NEDD8-203ENST00000524927 CSH1P0DML2 217 aa7.23□□□□□ -1.25
NEDD8-203ENST00000524927 CSH2P0DML3 217 aa7.23□□□□□ -1.25
NEDD8-203ENST00000524927 ALOX15P16050 662 aaPredicted RBP7.23□□□□□ -1.25
NEDD8-203ENST00000524927 HDCP19113 662 aa7.23□□□□□ -1.25
NEDD8-203ENST00000524927 ITGA3P26006 1051 aa7.23□□□□□ -1.25
NEDD8-203ENST00000524927 TRAPPC10P48553 1259 aa7.23□□□□□ -1.25
NEDD8-203ENST00000524927 HARS2P49590 506 aaKnown RBP7.23□□□□□ -1.25
NEDD8-203ENST00000524927 PSMC5P62195 406 aa7.23□□□□□ -1.25
NEDD8-203ENST00000524927 DMP1Q13316 513 aaPredicted RBP7.23□□□□□ -1.25
NEDD8-203ENST00000524927 CAPSQ13938 189 aa7.23□□□□□ -1.25
NEDD8-203ENST00000524927 KCNB1Q14721 858 aa7.23□□□□□ -1.25
NEDD8-203ENST00000524927 EMC2Q15006 297 aa7.23□□□□□ -1.25
NEDD8-203ENST00000524927 KIF26BQ2KJY2 2108 aa7.23□□□□□ -1.25
NEDD8-203ENST00000524927 XKR4Q5GH76 650 aa7.23□□□□□ -1.25
NEDD8-203ENST00000524927 MIER3Q7Z3K6 550 aa7.23□□□□□ -1.25
NEDD8-203ENST00000524927 USP37Q86T82 979 aa7.23□□□□□ -1.25
NEDD8-203ENST00000524927 PRIMA1Q86XR5 153 aa7.23□□□□□ -1.25
NEDD8-203ENST00000524927 GLIS1Q8NBF1 620 aa7.23□□□□□ -1.25
NEDD8-203ENST00000524927 OR4C6Q8NH72 309 aa7.23□□□□□ -1.25
NEDD8-203ENST00000524927 LRRC15Q8TF66 581 aa7.23□□□□□ -1.25
NEDD8-203ENST00000524927 C2orf15Q8WU43 125 aaKnown RBP7.23□□□□□ -1.25
NEDD8-203ENST00000524927 NEIL1Q96FI4 390 aaPredicted RBP7.23□□□□□ -1.25
NEDD8-203ENST00000524927 CEP170P1Q96L14 293 aa7.23□□□□□ -1.25
NEDD8-203ENST00000524927 DPYSL5Q9BPU6 564 aa7.23□□□□□ -1.25
NEDD8-203ENST00000524927 ADPGKQ9BRR6 497 aa7.23□□□□□ -1.25
NEDD8-203ENST00000524927 TEKT3Q9BXF9 490 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms