RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 HYPKQ9NX55 129 aa1.81□□□□□ -2.12
CD44-212ENST00000524922 TMOD2Q9NZR1 351 aa1.81□□□□□ -2.12
CD44-212ENST00000524922 FNIP2Q9P278 1114 aa1.81□□□□□ -2.12
CD44-212ENST00000524922 DBF4Q9UBU7 674 aaPredicted RBP1.81□□□□□ -2.12
CD44-212ENST00000524922 TRMT112Q9UI30 125 aaKnown RBP1.81□□□□□ -2.12
CD44-212ENST00000524922 NUDCQ9Y266 331 aa1.81□□□□□ -2.12
CD44-212ENST00000524922 ADAM18Q9Y3Q7 739 aa1.81□□□□□ -2.12
CD44-212ENST00000524922 KNSTRNQ9Y448 316 aa1.81□□□□□ -2.12
CD44-212ENST00000524922 SLC4A4Q9Y6R1 1079 aa1.81□□□□□ -2.12
CD44-212ENST00000524922 MROH7-TTC4A0A0A0MT08 1334 aa1.81□□□□□ -2.12
CD44-212ENST00000524922 ASTN2O75129 1339 aaPredicted RBP1.81□□□□□ -2.12
CD44-212ENST00000524922 SALL1Q9NSC2 1324 aa1.81□□□□□ -2.12
CD44-212ENST00000524922 MAP1BP46821 2468 aaKnown RBP1.81□□□□□ -2.12
CD44-212ENST00000524922 ALPK3Q96L96 1907 aa1.81□□□□□ -2.12
CD44-212ENST00000524922 OTOFQ9HC10 1997 aa1.81□□□□□ -2.12
CD44-212ENST00000524922 USP9XQ93008 2570 aaPredicted RBP1.81□□□□□ -2.12
CD44-212ENST00000524922 DDX60LQ5H9U9 1706 aaKnown RBP1.8□□□□□ -2.12
CD44-212ENST00000524922 MYO18BQ8IUG5 2567 aa1.8□□□□□ -2.12
CD44-212ENST00000524922 A0A0B4J293 547 aa1.8□□□□□ -2.12
CD44-212ENST00000524922 LOC102724159A0A0B4J2E5 919 aa1.8□□□□□ -2.12
CD44-212ENST00000524922 TCRBV7S3A2A0A539 114 aa1.8□□□□□ -2.12
CD44-212ENST00000524922 SERINC4A6NH21 518 aa1.8□□□□□ -2.12
CD44-212ENST00000524922 MBD3L5A6NJ08 208 aaPredicted RBP1.8□□□□□ -2.12
CD44-212ENST00000524922 NPIPB11E5RHQ5 1161 aa1.8□□□□□ -2.12
CD44-212ENST00000524922 MS4A18H0YCH9 400 aa1.8□□□□□ -2.12
CD44-212ENST00000524922 BMPR1BO00238 502 aa1.8□□□□□ -2.12
CD44-212ENST00000524922 VWA5AO00534 786 aa1.8□□□□□ -2.12
CD44-212ENST00000524922 PMM2O15305 246 aa1.8□□□□□ -2.12
CD44-212ENST00000524922 SEPT4O43236 478 aa1.8□□□□□ -2.12
CD44-212ENST00000524922 LIASO43766 372 aa1.8□□□□□ -2.12
CD44-212ENST00000524922 ENTPD3O75355 529 aa1.8□□□□□ -2.12
CD44-212ENST00000524922 CABYRO75952 493 aa1.8□□□□□ -2.12
CD44-212ENST00000524922 BAIAP3O94812 1187 aa1.8□□□□□ -2.12
CD44-212ENST00000524922 HEXIM1O94992 359 aaKnown RBP1.8□□□□□ -2.12
CD44-212ENST00000524922 CLDN7O95471 211 aa1.8□□□□□ -2.12
CD44-212ENST00000524922 PAK4O96013 591 aaPredicted RBP1.8□□□□□ -2.12
CD44-212ENST00000524922 IGLV2-11P01706 119 aa1.8□□□□□ -2.12
CD44-212ENST00000524922 SP1P08047 785 aa1.8□□□□□ -2.12
CD44-212ENST00000524922 SNRNP70P08621 437 aaKnown RBP1.8□□□□□ -2.12
CD44-212ENST00000524922 CLTBP09497 229 aa1.8□□□□□ -2.12
CD44-212ENST00000524922 TRIM27P14373 513 aa1.8□□□□□ -2.12
CD44-212ENST00000524922 IDEP14735 1019 aa1.8□□□□□ -2.12
CD44-212ENST00000524922 PRPH2P23942 346 aa1.8□□□□□ -2.12
CD44-212ENST00000524922 TYK2P29597 1187 aa1.8□□□□□ -2.12
CD44-212ENST00000524922 GRK5P34947 590 aa1.8□□□□□ -2.12
CD44-212ENST00000524922 COPB2P35606 906 aa1.8□□□□□ -2.12
CD44-212ENST00000524922 STAT1P42224 750 aa1.8□□□□□ -2.12
CD44-212ENST00000524922 GLIPR1P48060 266 aa1.8□□□□□ -2.12
CD44-212ENST00000524922 AMTP48728 403 aa1.8□□□□□ -2.12
CD44-212ENST00000524922 HILS1P60008 231 aa1.8□□□□□ -2.12
CD44-212ENST00000524922 TUBA1BP68363 451 aa1.8□□□□□ -2.12
CD44-212ENST00000524922 CCNA1P78396 465 aa1.8□□□□□ -2.12
CD44-212ENST00000524922 DSC1Q08554 894 aa1.8□□□□□ -2.12
CD44-212ENST00000524922 UBE4AQ14139 1066 aa1.8□□□□□ -2.12
CD44-212ENST00000524922 RBM39Q14498 530 aaKnown RBP1.8□□□□□ -2.12
CD44-212ENST00000524922 PWP2Q15269 919 aaKnown RBP1.8□□□□□ -2.12
CD44-212ENST00000524922 SHHQ15465 462 aa1.8□□□□□ -2.12
CD44-212ENST00000524922 LRRC26Q2I0M4 334 aa1.8□□□□□ -2.12
CD44-212ENST00000524922 MFSD14CQ5VZR4 134 aa1.8□□□□□ -2.12
CD44-212ENST00000524922 ARL6IP4Q66PJ3 421 aaKnown RBP1.8□□□□□ -2.12
CD44-212ENST00000524922 ANKRD40Q6AI12 368 aa1.8□□□□□ -2.12
CD44-212ENST00000524922 PPP4R4Q6NUP7 873 aa1.8□□□□□ -2.12
CD44-212ENST00000524922 FBXL22Q6P050 247 aa1.8□□□□□ -2.12
CD44-212ENST00000524922 SLC30A9Q6PML9 568 aa1.8□□□□□ -2.12
CD44-212ENST00000524922 CCDC129Q6ZRS4 1044 aa1.8□□□□□ -2.12
CD44-212ENST00000524922 MOB2Q70IA6 237 aa1.8□□□□□ -2.12
CD44-212ENST00000524922 CREB3L2Q70SY1 520 aa1.8□□□□□ -2.12
CD44-212ENST00000524922 H1FNTQ75WM6 255 aaPredicted RBP1.8□□□□□ -2.12
CD44-212ENST00000524922 COPS6Q7L5N1 327 aa1.8□□□□□ -2.12
CD44-212ENST00000524922 DPP9Q86TI2 863 aa1.8□□□□□ -2.12
CD44-212ENST00000524922 TMEM200AQ86VY9 491 aa1.8□□□□□ -2.12
CD44-212ENST00000524922 CERS3Q8IU89 383 aa1.8□□□□□ -2.12
CD44-212ENST00000524922 SCYL3Q8IZE3 742 aa1.8□□□□□ -2.12
CD44-212ENST00000524922 TXLNBQ8N3L3 684 aa1.8□□□□□ -2.12
CD44-212ENST00000524922 OR2C3Q8N628 320 aa1.8□□□□□ -2.12
CD44-212ENST00000524922 TEX45Q8NA69 505 aa1.8□□□□□ -2.12
CD44-212ENST00000524922 USP38Q8NB14 1042 aa1.8□□□□□ -2.12
CD44-212ENST00000524922 ZNF114Q8NC26 417 aa1.8□□□□□ -2.12
CD44-212ENST00000524922 LILRB1Q8NHL6 650 aaPredicted RBP1.8□□□□□ -2.12
CD44-212ENST00000524922 NEK9Q8TD19 979 aa1.8□□□□□ -2.12
CD44-212ENST00000524922 IPO4Q8TEX9 1081 aaKnown RBP1.8□□□□□ -2.12
CD44-212ENST00000524922 HDAC7Q8WUI4 952 aa1.8□□□□□ -2.12
CD44-212ENST00000524922 FAM151AQ8WW52 585 aa1.8□□□□□ -2.12
CD44-212ENST00000524922 TRIB2Q92519 343 aa1.8□□□□□ -2.12
CD44-212ENST00000524922 HES6Q96HZ4 224 aa1.8□□□□□ -2.12
CD44-212ENST00000524922 C12orf42Q96LP6 360 aa1.8□□□□□ -2.12
CD44-212ENST00000524922 FIZ1Q96SL8 496 aa1.8□□□□□ -2.12
CD44-212ENST00000524922 HDHD5Q9BXW7 423 aa1.8□□□□□ -2.12
CD44-212ENST00000524922 ACTR5Q9H9F9 607 aaPredicted RBP1.8□□□□□ -2.12
CD44-212ENST00000524922 CD209Q9NNX6 404 aa1.8□□□□□ -2.12
CD44-212ENST00000524922 TM7SF3Q9NS93 570 aa1.8□□□□□ -2.12
CD44-212ENST00000524922 ARL15Q9NXU5 204 aa1.8□□□□□ -2.12
CD44-212ENST00000524922 TCEAL9Q9UHQ7 104 aa1.8□□□□□ -2.12
CD44-212ENST00000524922 CTNNA3Q9UI47 895 aa1.8□□□□□ -2.12
CD44-212ENST00000524922 TBX21Q9UL17 535 aa1.8□□□□□ -2.12
CD44-212ENST00000524922 AGO1Q9UL18 857 aaKnown RBP1.8□□□□□ -2.12
CD44-212ENST00000524922 CNTN6Q9UQ52 1028 aa1.8□□□□□ -2.12
CD44-212ENST00000524922 RCE1Q9Y256 329 aa1.8□□□□□ -2.12
CD44-212ENST00000524922 TRIOO75962 3097 aa1.8□□□□□ -2.12
CD44-212ENST00000524922 VPS13AQ96RL7 3174 aa1.8□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms