RNA–Protein interactions for RNA: ENST00000523768.5

TNPO1-213, Transcript of transportin 1, humanhuman

TSL 2 BASIC

Gene TNPO1, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-213ENST00000523768 RING1Q06587 406 aa11.34□□□□□ -0.59
TNPO1-213ENST00000523768 MRPL58Q14197 206 aaKnown RBP11.34□□□□□ -0.59
TNPO1-213ENST00000523768 FASTKQ14296 549 aaKnown RBP11.34□□□□□ -0.59
TNPO1-213ENST00000523768 LIN52Q52LA3 116 aa11.34□□□□□ -0.59
TNPO1-213ENST00000523768 SLC30A9Q6PML9 568 aa11.34□□□□□ -0.59
TNPO1-213ENST00000523768 RPS27LQ71UM5 84 aaKnown RBP11.34□□□□□ -0.59
TNPO1-213ENST00000523768 ZNF354CQ86Y25 554 aa11.34□□□□□ -0.59
TNPO1-213ENST00000523768 LILRA2Q8N149 483 aa11.34□□□□□ -0.59
TNPO1-213ENST00000523768 GALNT15Q8N3T1 639 aa11.34□□□□□ -0.59
TNPO1-213ENST00000523768 RNF148Q8N7C7 305 aa11.34□□□□□ -0.59
TNPO1-213ENST00000523768 PNPLA1Q8N8W4 532 aa11.34□□□□□ -0.59
TNPO1-213ENST00000523768 FBXO32Q969P5 355 aa11.34□□□□□ -0.59
TNPO1-213ENST00000523768 TBATAQ96M53 351 aa11.34□□□□□ -0.59
TNPO1-213ENST00000523768 GCNAQ96QF7 691 aa11.34□□□□□ -0.59
TNPO1-213ENST00000523768 ARHGAP39Q9C0H5 1083 aa11.34□□□□□ -0.59
TNPO1-213ENST00000523768 POLR1EQ9GZS1 481 aaKnown RBP11.34□□□□□ -0.59
TNPO1-213ENST00000523768 TRPC7Q9HCX4 862 aa11.34□□□□□ -0.59
TNPO1-213ENST00000523768 MARCH2Q9P0N8 246 aa11.34□□□□□ -0.59
TNPO1-213ENST00000523768 RAB26Q9ULW5 256 aa11.34□□□□□ -0.59
TNPO1-213ENST00000523768 KCTD3Q9Y597 815 aa11.34□□□□□ -0.59
TNPO1-213ENST00000523768 FRMPD3Q5JV73 1810 aa11.34□□□□□ -0.59
TNPO1-213ENST00000523768 TTC24A2A3L6 582 aaPredicted RBP11.34□□□□□ -0.59
TNPO1-213ENST00000523768 OR51F1A6NGY5 319 aa11.34□□□□□ -0.59
TNPO1-213ENST00000523768 CCL22O00626 93 aa11.34□□□□□ -0.59
TNPO1-213ENST00000523768 FBP2O00757 339 aa11.34□□□□□ -0.59
TNPO1-213ENST00000523768 PRAMEF11O60813 436 aa11.34□□□□□ -0.59
TNPO1-213ENST00000523768 GPC4O75487 556 aa11.34□□□□□ -0.59
TNPO1-213ENST00000523768 GLP2RO95838 553 aa11.34□□□□□ -0.59
TNPO1-213ENST00000523768 CLCN2P51788 898 aa11.34□□□□□ -0.59
TNPO1-213ENST00000523768 TRIM25Q14258 630 aaKnown RBP11.34□□□□□ -0.59
TNPO1-213ENST00000523768 PPP1R3AQ16821 1122 aa11.34□□□□□ -0.59
TNPO1-213ENST00000523768 UNC50Q53HI1 259 aa11.34□□□□□ -0.59
TNPO1-213ENST00000523768 REP15Q6BDI9 236 aa11.34□□□□□ -0.59
TNPO1-213ENST00000523768 CYHR1Q6ZMK1 362 aa11.34□□□□□ -0.59
TNPO1-213ENST00000523768 LARP4Q71RC2 724 aaKnown RBP eCLIP11.34□□□□□ -0.59
TNPO1-213ENST00000523768 TTC9BQ8N6N2 239 aa11.34□□□□□ -0.59
TNPO1-213ENST00000523768 PCSK9Q8NBP7 692 aaKnown RBP11.34□□□□□ -0.59
TNPO1-213ENST00000523768 ATAD1Q8NBU5 361 aa11.34□□□□□ -0.59
TNPO1-213ENST00000523768 ZFAND2BQ8WV99 257 aa11.34□□□□□ -0.59
TNPO1-213ENST00000523768 KLHL32Q96NJ5 620 aa11.34□□□□□ -0.59
TNPO1-213ENST00000523768 SEMA3CQ99985 751 aa11.34□□□□□ -0.59
TNPO1-213ENST00000523768 CENPKQ9BS16 269 aa11.34□□□□□ -0.59
TNPO1-213ENST00000523768 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.34□□□□□ -0.592e-7■■■■□ 22.2
TNPO1-213ENST00000523768 Q9H521 79 aa11.34□□□□□ -0.59
TNPO1-213ENST00000523768 POPDC3Q9HBV1 291 aa11.34□□□□□ -0.59
TNPO1-213ENST00000523768 TLR8Q9NR97 1041 aaKnown RBP11.34□□□□□ -0.59
TNPO1-213ENST00000523768 PRG3Q9Y2Y8 225 aaPredicted RBP11.34□□□□□ -0.59
TNPO1-213ENST00000523768 TLL2Q9Y6L7 1015 aa11.34□□□□□ -0.59
TNPO1-213ENST00000523768 MOXD2PA6NHM9 499 aa11.33□□□□□ -0.6
TNPO1-213ENST00000523768 TRIM24O15164 1050 aa11.33□□□□□ -0.6
TNPO1-213ENST00000523768 DNAJA2O60884 412 aa11.33□□□□□ -0.6
TNPO1-213ENST00000523768 GOT2P00505 430 aaKnown RBP11.33□□□□□ -0.6
TNPO1-213ENST00000523768 MYCNP04198 464 aaPredicted RBP11.33□□□□□ -0.6
TNPO1-213ENST00000523768 SNRPB2P08579 225 aaKnown RBP11.33□□□□□ -0.6
TNPO1-213ENST00000523768 CD1DP15813 335 aa11.33□□□□□ -0.6
TNPO1-213ENST00000523768 ACADVLP49748 655 aa11.33□□□□□ -0.6
TNPO1-213ENST00000523768 HERVK_113P63132 956 aa11.33□□□□□ -0.6
TNPO1-213ENST00000523768 TIAL1Q01085 375 aaKnown RBP eCLIP11.33□□□□□ -0.6
TNPO1-213ENST00000523768 MTA1Q13330 715 aa11.33□□□□□ -0.6
TNPO1-213ENST00000523768 PDAP1Q13442 181 aaKnown RBP11.33□□□□□ -0.6
TNPO1-213ENST00000523768 TLR1Q15399 786 aa11.33□□□□□ -0.6
TNPO1-213ENST00000523768 CTXN3Q4LDR2 81 aa11.33□□□□□ -0.6
TNPO1-213ENST00000523768 AGKQ53H12 422 aa11.33□□□□□ -0.6
TNPO1-213ENST00000523768 NAIF1Q69YI7 327 aaPredicted RBP11.33□□□□□ -0.6
TNPO1-213ENST00000523768 ALG1LQ6GMV1 187 aa11.33□□□□□ -0.6
TNPO1-213ENST00000523768 MRNIPQ6NTE8 343 aa11.33□□□□□ -0.6
TNPO1-213ENST00000523768 ZNF549Q6P9A3 640 aa11.33□□□□□ -0.6
TNPO1-213ENST00000523768 HACD2Q6Y1H2 254 aa11.33□□□□□ -0.6
TNPO1-213ENST00000523768 SAPCD2Q86UD0 394 aa11.33□□□□□ -0.6
TNPO1-213ENST00000523768 SPDYE1Q8NFV5 336 aaPredicted RBP11.33□□□□□ -0.6
TNPO1-213ENST00000523768 BRSK1Q8TDC3 778 aa11.33□□□□□ -0.6
TNPO1-213ENST00000523768 LINC01599Q8WXQ3 324 aa11.33□□□□□ -0.6
TNPO1-213ENST00000523768 PTERQ96BW5 349 aa11.33□□□□□ -0.6
TNPO1-213ENST00000523768 RPRD1AQ96P16 312 aaPredicted RBP11.33□□□□□ -0.6
TNPO1-213ENST00000523768 ASB2Q96Q27 587 aa11.33□□□□□ -0.6
TNPO1-213ENST00000523768 SLC25A23Q9BV35 468 aa11.33□□□□□ -0.6
TNPO1-213ENST00000523768 ERVK-6Q9BXR3 956 aa11.33□□□□□ -0.6
TNPO1-213ENST00000523768 COPS7BQ9H9Q2 264 aaPredicted RBP11.33□□□□□ -0.6
TNPO1-213ENST00000523768 POLR3BQ9NW08 1133 aaPredicted RBP11.33□□□□□ -0.6
TNPO1-213ENST00000523768 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.33□□□□□ -0.63e-14■■■■■ 43.7
TNPO1-213ENST00000523768 ADA2Q9NZK5 511 aa11.33□□□□□ -0.6
TNPO1-213ENST00000523768 EPS15L1Q9UBC2 864 aa11.33□□□□□ -0.6
TNPO1-213ENST00000523768 SLC12A8A0AV02 714 aa11.33□□□□□ -0.6
TNPO1-213ENST00000523768 OR6C75A6NL08 312 aa11.33□□□□□ -0.6
TNPO1-213ENST00000523768 E7ENX8 843 aa11.33□□□□□ -0.6
TNPO1-213ENST00000523768 TXNDC9O14530 226 aa11.33□□□□□ -0.6
TNPO1-213ENST00000523768 RPP40O75818 363 aaKnown RBP11.33□□□□□ -0.6
TNPO1-213ENST00000523768 SUPT7LO94864 414 aa11.33□□□□□ -0.6
TNPO1-213ENST00000523768 C8BP07358 591 aa11.33□□□□□ -0.6
TNPO1-213ENST00000523768 FGF4P08620 206 aa11.33□□□□□ -0.6
TNPO1-213ENST00000523768 CKBP12277 381 aa11.33□□□□□ -0.6
TNPO1-213ENST00000523768 OGNP20774 298 aaKnown RBP11.33□□□□□ -0.6
TNPO1-213ENST00000523768 CCND3P30281 292 aaPredicted RBP11.33□□□□□ -0.6
TNPO1-213ENST00000523768 OR1E1P30953 314 aa11.33□□□□□ -0.6
TNPO1-213ENST00000523768 ETFBP38117 255 aa11.33□□□□□ -0.6
TNPO1-213ENST00000523768 TRAP1Q12931 704 aaKnown RBP11.33□□□□□ -0.6
TNPO1-213ENST00000523768 UGT3A2Q3SY77 523 aa11.33□□□□□ -0.6
TNPO1-213ENST00000523768 C10orf120Q5SQS8 335 aa11.33□□□□□ -0.6
TNPO1-213ENST00000523768 RASIP1Q5U651 963 aa11.33□□□□□ -0.6
TNPO1-213ENST00000523768 C8orf82Q6P1X6 216 aaPredicted RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms