RNA–Protein interactions for RNA: ENST00000523636.5

PABPC1-223, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-223ENST00000523636 FOXRED1Q96CU9 486 aaPredicted RBP5.3□□□□□ -1.56
PABPC1-223ENST00000523636 PRR11Q96HE9 360 aaPredicted RBP5.3□□□□□ -1.56
PABPC1-223ENST00000523636 ZNF845Q96IR2 970 aaPredicted RBP5.3□□□□□ -1.56
PABPC1-223ENST00000523636 FOXB1Q99853 325 aa5.3□□□□□ -1.56
PABPC1-223ENST00000523636 KRTAP4-12Q9BQ66 201 aa5.3□□□□□ -1.56
PABPC1-223ENST00000523636 FDXACB1Q9BRP7 624 aaPredicted RBP5.3□□□□□ -1.56
PABPC1-223ENST00000523636 FUCA2Q9BTY2 467 aa5.3□□□□□ -1.56
PABPC1-223ENST00000523636 KRTAP17-1Q9BYP8 105 aa5.3□□□□□ -1.56
PABPC1-223ENST00000523636 DNAI2Q9GZS0 605 aa5.3□□□□□ -1.56
PABPC1-223ENST00000523636 SLITRK6Q9H5Y7 841 aa5.3□□□□□ -1.56
PABPC1-223ENST00000523636 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.3□□□□□ -1.56
PABPC1-223ENST00000523636 AGPAT5Q9NUQ2 364 aa5.3□□□□□ -1.56
PABPC1-223ENST00000523636 CORO2BQ9UQ03 480 aa5.3□□□□□ -1.56
PABPC1-223ENST00000523636 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.3□□□□□ -1.56
PABPC1-223ENST00000523636 ZNF106Q9H2Y7 1883 aaKnown RBP5.3□□□□□ -1.56
PABPC1-223ENST00000523636 UBE4BO95155 1302 aa5.29□□□□□ -1.56
PABPC1-223ENST00000523636 BIRC6Q9NR09 4857 aa5.29□□□□□ -1.56
PABPC1-223ENST00000523636 A0A1B0GTW7 788 aa5.29□□□□□ -1.56
PABPC1-223ENST00000523636 A0A1B0GVT2 93 aa5.29□□□□□ -1.56
PABPC1-223ENST00000523636 KLHL33A6NCF5 533 aa5.29□□□□□ -1.56
PABPC1-223ENST00000523636 DAPK3O43293 454 aa5.29□□□□□ -1.56
PABPC1-223ENST00000523636 B3GALT2O43825 422 aa5.29□□□□□ -1.56
PABPC1-223ENST00000523636 TSPAN3O60637 253 aa5.29□□□□□ -1.56
PABPC1-223ENST00000523636 TBCAO75347 108 aaKnown RBP5.29□□□□□ -1.56
PABPC1-223ENST00000523636 TADA2AO75478 443 aa5.29□□□□□ -1.56
PABPC1-223ENST00000523636 SLC22A3O75751 556 aa5.29□□□□□ -1.56
PABPC1-223ENST00000523636 SOAT2O75908 522 aa5.29□□□□□ -1.56
PABPC1-223ENST00000523636 USP1O94782 785 aa5.29□□□□□ -1.56
PABPC1-223ENST00000523636 PRKCBP05771 671 aa5.29□□□□□ -1.56
PABPC1-223ENST00000523636 PCP11498 1178 aaKnown RBP5.29□□□□□ -1.56
PABPC1-223ENST00000523636 GABRG2P18507 467 aa5.29□□□□□ -1.56
PABPC1-223ENST00000523636 TFEBP19484 476 aa5.29□□□□□ -1.56
PABPC1-223ENST00000523636 PSMA5P28066 241 aa5.29□□□□□ -1.56
PABPC1-223ENST00000523636 OPRD1P41143 372 aa5.29□□□□□ -1.56
PABPC1-223ENST00000523636 MC3RP41968 323 aa5.29□□□□□ -1.56
PABPC1-223ENST00000523636 SLC26A2P50443 739 aa5.29□□□□□ -1.56
PABPC1-223ENST00000523636 NCKAP1LP55160 1127 aa5.29□□□□□ -1.56
PABPC1-223ENST00000523636 IL9RQ01113 521 aa5.29□□□□□ -1.56
PABPC1-223ENST00000523636 CYP4A11Q02928 519 aa5.29□□□□□ -1.56
PABPC1-223ENST00000523636 TWF1Q12792 350 aa5.29□□□□□ -1.56
PABPC1-223ENST00000523636 ERV3-1Q14264 604 aa5.29□□□□□ -1.56
PABPC1-223ENST00000523636 ACAP2Q15057 778 aa5.29□□□□□ -1.56
PABPC1-223ENST00000523636 NAB2Q15742 525 aa5.29□□□□□ -1.56
PABPC1-223ENST00000523636 KIF19Q2TAC6 998 aa5.29□□□□□ -1.56
PABPC1-223ENST00000523636 TTC38Q5R3I4 469 aa5.29□□□□□ -1.56
PABPC1-223ENST00000523636 FHL5Q5TD97 284 aa5.29□□□□□ -1.56
PABPC1-223ENST00000523636 EMC10Q5UCC4 262 aa5.29□□□□□ -1.56
PABPC1-223ENST00000523636 RNF220Q5VTB9 566 aa5.29□□□□□ -1.56
PABPC1-223ENST00000523636 SLC8B1Q6J4K2 584 aa5.29□□□□□ -1.56
PABPC1-223ENST00000523636 JMJD6Q6NYC1 403 aaPredicted RBP5.29□□□□□ -1.56
PABPC1-223ENST00000523636 SHQ1Q6PI26 577 aaKnown RBP5.29□□□□□ -1.56
PABPC1-223ENST00000523636 APOA5Q6Q788 366 aa5.29□□□□□ -1.56
PABPC1-223ENST00000523636 LIPIQ6XZB0 460 aa5.29□□□□□ -1.56
PABPC1-223ENST00000523636 KDM7AQ6ZMT4 941 aa5.29□□□□□ -1.56
PABPC1-223ENST00000523636 ARHGEF18Q6ZSZ5 1173 aa5.29□□□□□ -1.56
PABPC1-223ENST00000523636 HAUS6Q7Z4H7 955 aa5.29□□□□□ -1.56
PABPC1-223ENST00000523636 TAX1BP1Q86VP1 789 aa5.29□□□□□ -1.56
PABPC1-223ENST00000523636 PHYKPLQ8IUZ5 450 aa5.29□□□□□ -1.56
PABPC1-223ENST00000523636 PPM1NQ8N819 430 aa5.29□□□□□ -1.56
PABPC1-223ENST00000523636 TXNDC5Q8NBS9 432 aaKnown RBP5.29□□□□□ -1.56
PABPC1-223ENST00000523636 HIPK4Q8NE63 616 aa5.29□□□□□ -1.56
PABPC1-223ENST00000523636 MOSPD2Q8NHP6 518 aa5.29□□□□□ -1.56
PABPC1-223ENST00000523636 ZNF461Q8TAF7 563 aa5.29□□□□□ -1.56
PABPC1-223ENST00000523636 FBXO30Q8TB52 745 aa5.29□□□□□ -1.56
PABPC1-223ENST00000523636 KIAA1524Q8TCG1 905 aa5.29□□□□□ -1.56
PABPC1-223ENST00000523636 OTUD7AQ8TE49 926 aaPredicted RBP5.29□□□□□ -1.56
PABPC1-223ENST00000523636 DENND1AQ8TEH3 1009 aa5.29□□□□□ -1.56
PABPC1-223ENST00000523636 HTRA1Q92743 480 aa5.29□□□□□ -1.56
PABPC1-223ENST00000523636 TMX3Q96JJ7 454 aa5.29□□□□□ -1.56
PABPC1-223ENST00000523636 SIGLEC10Q96LC7 697 aa5.29□□□□□ -1.56
PABPC1-223ENST00000523636 FAM81BQ96LP2 452 aa5.29□□□□□ -1.56
PABPC1-223ENST00000523636 C7orf26Q96N11 449 aa5.29□□□□□ -1.56
PABPC1-223ENST00000523636 TCHPQ9BT92 498 aa5.29□□□□□ -1.56
PABPC1-223ENST00000523636 SORBS1Q9BX66 1292 aaKnown RBP5.29□□□□□ -1.56
PABPC1-223ENST00000523636 SGPP1Q9BX95 441 aa5.29□□□□□ -1.56
PABPC1-223ENST00000523636 EIF2AQ9BY44 585 aaKnown RBP5.29□□□□□ -1.56
PABPC1-223ENST00000523636 SLC7A5P2Q9GIP4 190 aa5.29□□□□□ -1.56
PABPC1-223ENST00000523636 NUP62CLQ9H1M0 184 aa5.29□□□□□ -1.56
PABPC1-223ENST00000523636 FAM124BQ9H5Z6 455 aaPredicted RBP5.29□□□□□ -1.56
PABPC1-223ENST00000523636 MINDY3Q9H8M7 445 aa5.29□□□□□ -1.56
PABPC1-223ENST00000523636 CCDC177Q9NQR7 707 aaPredicted RBP5.29□□□□□ -1.56
PABPC1-223ENST00000523636 KRT84Q9NSB2 600 aa5.29□□□□□ -1.56
PABPC1-223ENST00000523636 INTS10Q9NVR2 710 aaKnown RBP5.29□□□□□ -1.56
PABPC1-223ENST00000523636 AIPL1Q9NZN9 384 aa5.29□□□□□ -1.56
PABPC1-223ENST00000523636 CALCOCO1Q9P1Z2 691 aa5.29□□□□□ -1.56
PABPC1-223ENST00000523636 FTSJ1Q9UET6 329 aa5.29□□□□□ -1.56
PABPC1-223ENST00000523636 TRRAPQ9Y4A5 3859 aa5.29□□□□□ -1.56
PABPC1-223ENST00000523636 EPPK1P58107 5090 aaKnown RBP5.29□□□□□ -1.56
PABPC1-223ENST00000523636 PLXNA2O75051 1894 aa5.28□□□□□ -1.56
PABPC1-223ENST00000523636 CKAP5Q14008 2032 aa5.28□□□□□ -1.56
PABPC1-223ENST00000523636 TCRBV21S2A2A0A5A6 115 aa5.28□□□□□ -1.56
PABPC1-223ENST00000523636 UBA6A0AVT1 1052 aaPredicted RBP5.28□□□□□ -1.56
PABPC1-223ENST00000523636 LRRC14BA6NHZ5 514 aa5.28□□□□□ -1.56
PABPC1-223ENST00000523636 RHPN2P1A8MT19 583 aa5.28□□□□□ -1.56
PABPC1-223ENST00000523636 H0YC42 278 aa5.28□□□□□ -1.56
PABPC1-223ENST00000523636 H3BML4 177 aa5.28□□□□□ -1.56
PABPC1-223ENST00000523636 M0QX08 132 aa5.28□□□□□ -1.56
PABPC1-223ENST00000523636 ETV2O00321 342 aaPredicted RBP5.28□□□□□ -1.56
PABPC1-223ENST00000523636 ZBTB5O15062 677 aa5.28□□□□□ -1.56
PABPC1-223ENST00000523636 PAPSS1O43252 624 aaPredicted RBP5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms