RNA–Protein interactions for RNA: ENST00000522371.5

HDAC2-213, Transcript of histone deacetylase 2, humanhuman

TSL 4

Gene HDAC2, Length 502 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-213ENST00000522371 CUL4AQ13619 759 aa3.39□□□□□ -1.87
HDAC2-213ENST00000522371 KEAP1Q14145 624 aa3.39□□□□□ -1.87
HDAC2-213ENST00000522371 WTAPQ15007 396 aa3.39□□□□□ -1.87
HDAC2-213ENST00000522371 ODF3L2Q3SX64 289 aa3.39□□□□□ -1.87
HDAC2-213ENST00000522371 TTC39AQ5SRH9 613 aa3.39□□□□□ -1.87
HDAC2-213ENST00000522371 SZRD1Q7Z422 152 aa3.39□□□□□ -1.87
HDAC2-213ENST00000522371 CTU1Q7Z7A3 348 aaKnown RBP3.39□□□□□ -1.87
HDAC2-213ENST00000522371 TICAM2Q86XR7 235 aa3.39□□□□□ -1.87
HDAC2-213ENST00000522371 PARP16Q8N5Y8 322 aa3.39□□□□□ -1.87
HDAC2-213ENST00000522371 ZMIZ2Q8NF64 920 aa3.39□□□□□ -1.87
HDAC2-213ENST00000522371 GPT2Q8TD30 523 aa3.39□□□□□ -1.87
HDAC2-213ENST00000522371 ELP5Q8TE02 316 aa3.39□□□□□ -1.87
HDAC2-213ENST00000522371 SCFD2Q8WU76 684 aa3.39□□□□□ -1.87
HDAC2-213ENST00000522371 HDAC7Q8WUI4 952 aa3.39□□□□□ -1.87
HDAC2-213ENST00000522371 DNASE2BQ8WZ79 361 aa3.39□□□□□ -1.87
HDAC2-213ENST00000522371 NR4A3Q92570 626 aa3.39□□□□□ -1.87
HDAC2-213ENST00000522371 MMABQ96EY8 250 aaPredicted RBP3.39□□□□□ -1.87
HDAC2-213ENST00000522371 CALML4Q96GE6 196 aa3.39□□□□□ -1.87
HDAC2-213ENST00000522371 RSRC1Q96IZ7 334 aaKnown RBP3.39□□□□□ -1.87
HDAC2-213ENST00000522371 MXRA8Q9BRK3 442 aa3.39□□□□□ -1.87
HDAC2-213ENST00000522371 SRSF8Q9BRL6 282 aaKnown RBP3.39□□□□□ -1.87
HDAC2-213ENST00000522371 H2AFJQ9BTM1 129 aa3.39□□□□□ -1.87
HDAC2-213ENST00000522371 NPFFR1Q9GZQ6 430 aa3.39□□□□□ -1.87
HDAC2-213ENST00000522371 PRKRIP1Q9H875 184 aaPredicted RBP3.39□□□□□ -1.87
HDAC2-213ENST00000522371 FBRSL1Q9HCM7 1045 aaKnown RBP3.39□□□□□ -1.87
HDAC2-213ENST00000522371 BPIFA1Q9NP55 256 aa3.39□□□□□ -1.87
HDAC2-213ENST00000522371 ANKEF1Q9NU02 776 aa3.39□□□□□ -1.87
HDAC2-213ENST00000522371 HCFC1R1Q9NWW0 138 aa3.39□□□□□ -1.87
HDAC2-213ENST00000522371 CLIC5Q9NZA1 410 aa3.39□□□□□ -1.87
HDAC2-213ENST00000522371 HAO1Q9UJM8 370 aa3.39□□□□□ -1.87
HDAC2-213ENST00000522371 RPS6KA6Q9UK32 745 aa3.39□□□□□ -1.87
HDAC2-213ENST00000522371 R3HDM2Q9Y2K5 976 aaKnown RBP3.39□□□□□ -1.87
HDAC2-213ENST00000522371 LYVE1Q9Y5Y7 322 aa3.39□□□□□ -1.87
HDAC2-213ENST00000522371 KAT6BQ8WYB5 2073 aa3.39□□□□□ -1.87
HDAC2-213ENST00000522371 A0A1W2PQ09 198 aa3.38□□□□□ -1.87
HDAC2-213ENST00000522371 FRMD3A2A2Y4 597 aa3.38□□□□□ -1.87
HDAC2-213ENST00000522371 IFITM10A6NMD0 228 aa3.38□□□□□ -1.87
HDAC2-213ENST00000522371 RNMTO43148 476 aaKnown RBP3.38□□□□□ -1.87
HDAC2-213ENST00000522371 CCNDBP1O95273 360 aa3.38□□□□□ -1.87
HDAC2-213ENST00000522371 CLDN7O95471 211 aa3.38□□□□□ -1.87
HDAC2-213ENST00000522371 STARD3NLO95772 234 aa3.38□□□□□ -1.87
HDAC2-213ENST00000522371 SCGB1D1O95968 90 aa3.38□□□□□ -1.87
HDAC2-213ENST00000522371 TFP02787 698 aa3.38□□□□□ -1.87
HDAC2-213ENST00000522371 HOXC6P09630 235 aa3.38□□□□□ -1.87
HDAC2-213ENST00000522371 SRD5A1P18405 259 aa3.38□□□□□ -1.87
HDAC2-213ENST00000522371 ACSL1P33121 698 aa3.38□□□□□ -1.87
HDAC2-213ENST00000522371 PIGAP37287 484 aa3.38□□□□□ -1.87
HDAC2-213ENST00000522371 RAD52P43351 418 aa3.38□□□□□ -1.87
HDAC2-213ENST00000522371 GALCP54803 685 aa3.38□□□□□ -1.87
HDAC2-213ENST00000522371 HIST2H2ACQ16777 129 aaPredicted RBP3.38□□□□□ -1.87
HDAC2-213ENST00000522371 SOWAHAQ2M3V2 549 aa3.38□□□□□ -1.87
HDAC2-213ENST00000522371 DPCR1Q3MIW9 517 aa3.38□□□□□ -1.87
HDAC2-213ENST00000522371 ZSCAN23Q3MJ62 389 aa3.38□□□□□ -1.87
HDAC2-213ENST00000522371 ESCO2Q56NI9 601 aa3.38□□□□□ -1.87
HDAC2-213ENST00000522371 TXNDC8Q6A555 127 aa3.38□□□□□ -1.87
HDAC2-213ENST00000522371 NADSYN1Q6IA69 706 aa3.38□□□□□ -1.87
HDAC2-213ENST00000522371 TMCO3Q6UWJ1 677 aa3.38□□□□□ -1.87
HDAC2-213ENST00000522371 GSG1LQ6UXU4 331 aa3.38□□□□□ -1.87
HDAC2-213ENST00000522371 CHST9Q7L1S5 443 aa3.38□□□□□ -1.87
HDAC2-213ENST00000522371 KDELC2Q7Z4H8 507 aa3.38□□□□□ -1.87
HDAC2-213ENST00000522371 TAGAPQ8N103 731 aa3.38□□□□□ -1.87
HDAC2-213ENST00000522371 ARHGEF2Q92974 986 aaKnown RBP3.38□□□□□ -1.87
HDAC2-213ENST00000522371 RNF183Q96D59 192 aa3.38□□□□□ -1.87
HDAC2-213ENST00000522371 CLMNQ96JQ2 1002 aa3.38□□□□□ -1.87
HDAC2-213ENST00000522371 LMLNQ96KR4 655 aa3.38□□□□□ -1.87
HDAC2-213ENST00000522371 TREX2Q9BQ50 279 aaPredicted RBP3.38□□□□□ -1.87
HDAC2-213ENST00000522371 CCDC68Q9H2F9 335 aa3.38□□□□□ -1.87
HDAC2-213ENST00000522371 MUC13Q9H3R2 512 aa3.38□□□□□ -1.87
HDAC2-213ENST00000522371 SH2D4AQ9H788 454 aa3.38□□□□□ -1.87
HDAC2-213ENST00000522371 SYNCQ9H7C4 482 aa3.38□□□□□ -1.87
HDAC2-213ENST00000522371 SLC28A3Q9HAS3 691 aa3.38□□□□□ -1.87
HDAC2-213ENST00000522371 SPATS2LQ9NUQ6 558 aaKnown RBP3.38□□□□□ -1.87
HDAC2-213ENST00000522371 SEL1LQ9UBV2 794 aa3.38□□□□□ -1.87
HDAC2-213ENST00000522371 FBXO40Q9UH90 709 aa3.38□□□□□ -1.87
HDAC2-213ENST00000522371 SLCO3A1Q9UIG8 710 aa3.38□□□□□ -1.87
HDAC2-213ENST00000522371 CARD8Q9Y2G2 431 aa3.38□□□□□ -1.87
HDAC2-213ENST00000522371 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.38□□□□□ -1.87
HDAC2-213ENST00000522371 FAM237AA0A1B0GTK4 181 aa3.37□□□□□ -1.87
HDAC2-213ENST00000522371 A0A1W2PQF6 199 aa3.37□□□□□ -1.87
HDAC2-213ENST00000522371 C1orf226A1L170 272 aa3.37□□□□□ -1.87
HDAC2-213ENST00000522371 C17orf102A2RUQ5 167 aa3.37□□□□□ -1.87
HDAC2-213ENST00000522371 SYNDIG1LA6NDD5 238 aa3.37□□□□□ -1.87
HDAC2-213ENST00000522371 B4DLN1 442 aa3.37□□□□□ -1.87
HDAC2-213ENST00000522371 USP17L23D6RBM5 183 aa3.37□□□□□ -1.87
HDAC2-213ENST00000522371 BEST1O76090 585 aa3.37□□□□□ -1.87
HDAC2-213ENST00000522371 IGKV3-20P01619 116 aa3.37□□□□□ -1.87
HDAC2-213ENST00000522371 LCKP06239 509 aa3.37□□□□□ -1.87
HDAC2-213ENST00000522371 IRF1P10914 325 aa3.37□□□□□ -1.87
HDAC2-213ENST00000522371 ETFAP13804 333 aa3.37□□□□□ -1.87
HDAC2-213ENST00000522371 ZNF8P17098 575 aaPredicted RBP3.37□□□□□ -1.87
HDAC2-213ENST00000522371 RRM1P23921 792 aa3.37□□□□□ -1.87
HDAC2-213ENST00000522371 SHMT1P34896 483 aa3.37□□□□□ -1.87
HDAC2-213ENST00000522371 RYKP34925 604 aa3.37□□□□□ -1.87
HDAC2-213ENST00000522371 AVPR1AP37288 418 aa3.37□□□□□ -1.87
HDAC2-213ENST00000522371 PMS2P54278 862 aa3.37□□□□□ -1.87
HDAC2-213ENST00000522371 GAS1P54826 345 aa3.37□□□□□ -1.87
HDAC2-213ENST00000522371 CDH8P55286 799 aa3.37□□□□□ -1.87
HDAC2-213ENST00000522371 CDH12P55289 794 aa3.37□□□□□ -1.87
HDAC2-213ENST00000522371 RRP1P56182 461 aaKnown RBP3.37□□□□□ -1.87
HDAC2-213ENST00000522371 RPL36AP83881 106 aaKnown RBP3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms