RNA–Protein interactions for RNA: ENST00000522222.5

SPIDR-218, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 4

Gene SPIDR, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-218ENST00000522222 CAMK2BQ13554 666 aa6.88□□□□□ -1.31
SPIDR-218ENST00000522222 SPARCL1Q14515 664 aa6.88□□□□□ -1.31
SPIDR-218ENST00000522222 ACAP1Q15027 740 aa6.88□□□□□ -1.31
SPIDR-218ENST00000522222 DPYSL2Q16555 572 aa6.88□□□□□ -1.31
SPIDR-218ENST00000522222 HADHQ16836 314 aaKnown RBP6.88□□□□□ -1.31
SPIDR-218ENST00000522222 KLHL38Q2WGJ6 581 aa6.88□□□□□ -1.31
SPIDR-218ENST00000522222 KCNT1Q5JUK3 1230 aa6.88□□□□□ -1.31
SPIDR-218ENST00000522222 WDR45BQ5MNZ6 344 aa6.88□□□□□ -1.31
SPIDR-218ENST00000522222 SYCP2LQ5T4T6 812 aa6.88□□□□□ -1.31
SPIDR-218ENST00000522222 ATXN7L2Q5T6C5 722 aaPredicted RBP6.88□□□□□ -1.31
SPIDR-218ENST00000522222 STPG1Q5TH74 334 aa6.88□□□□□ -1.31
SPIDR-218ENST00000522222 AGBL4Q5VU57 503 aa6.88□□□□□ -1.31
SPIDR-218ENST00000522222 FAM46CQ5VWP2 391 aa6.88□□□□□ -1.31
SPIDR-218ENST00000522222 IZUMO3Q5VZ72 239 aa6.88□□□□□ -1.31
SPIDR-218ENST00000522222 KIAA0895LQ68EN5 471 aa6.88□□□□□ -1.31
SPIDR-218ENST00000522222 HIBCHQ6NVY1 386 aaPredicted RBP6.88□□□□□ -1.31
SPIDR-218ENST00000522222 NCEH1Q6PIU2 408 aa6.88□□□□□ -1.31
SPIDR-218ENST00000522222 LAYNQ6UX15 382 aa6.88□□□□□ -1.31
SPIDR-218ENST00000522222 DPY19L3Q6ZPD9 716 aa6.88□□□□□ -1.31
SPIDR-218ENST00000522222 CENPUQ71F23 418 aa6.88□□□□□ -1.31
SPIDR-218ENST00000522222 GSTA5Q7RTV2 222 aa6.88□□□□□ -1.31
SPIDR-218ENST00000522222 ARHGAP12Q8IWW6 846 aa6.88□□□□□ -1.31
SPIDR-218ENST00000522222 RGL4Q8IZJ4 473 aa6.88□□□□□ -1.31
SPIDR-218ENST00000522222 UMODL1-AS1Q8N2C9 162 aa6.88□□□□□ -1.31
SPIDR-218ENST00000522222 HDDC3Q8N4P3 179 aa6.88□□□□□ -1.31
SPIDR-218ENST00000522222 NETO2Q8NC67 525 aa6.88□□□□□ -1.31
SPIDR-218ENST00000522222 OR2T34Q8NGX1 318 aa6.88□□□□□ -1.31
SPIDR-218ENST00000522222 OR6K2Q8NGY2 324 aa6.88□□□□□ -1.31
SPIDR-218ENST00000522222 MDM1Q8TC05 714 aa6.88□□□□□ -1.31
SPIDR-218ENST00000522222 ZNF398Q8TD17 642 aa6.88□□□□□ -1.31
SPIDR-218ENST00000522222 TEKT4Q8WW24 435 aa6.88□□□□□ -1.31
SPIDR-218ENST00000522222 DNASE2BQ8WZ79 361 aa6.88□□□□□ -1.31
SPIDR-218ENST00000522222 FAM131CQ96AQ9 280 aa6.88□□□□□ -1.31
SPIDR-218ENST00000522222 ARRDC3Q96B67 414 aa6.88□□□□□ -1.31
SPIDR-218ENST00000522222 ALKBH8Q96BT7 664 aaKnown RBP6.88□□□□□ -1.31
SPIDR-218ENST00000522222 CSPG4P5Q96PW8 444 aa6.88□□□□□ -1.31
SPIDR-218ENST00000522222 SMC6Q96SB8 1091 aa6.88□□□□□ -1.31
SPIDR-218ENST00000522222 ELAC2Q9BQ52 826 aaKnown RBP6.88□□□□□ -1.31
SPIDR-218ENST00000522222 TUBB6Q9BUF5 446 aa6.88□□□□□ -1.31
SPIDR-218ENST00000522222 FRMD8Q9BZ67 464 aaPredicted RBP6.88□□□□□ -1.31
SPIDR-218ENST00000522222 MIR1-1HGQ9H1L0 117 aa6.88□□□□□ -1.31
SPIDR-218ENST00000522222 PDFQ9HBH1 243 aa6.88□□□□□ -1.31
SPIDR-218ENST00000522222 PCDH9Q9HC56 1237 aa6.88□□□□□ -1.31
SPIDR-218ENST00000522222 CAPN10Q9HC96 672 aa6.88□□□□□ -1.31
SPIDR-218ENST00000522222 PCDH18Q9HCL0 1135 aa6.88□□□□□ -1.31
SPIDR-218ENST00000522222 KLHL11Q9NVR0 708 aa6.88□□□□□ -1.31
SPIDR-218ENST00000522222 DLL3Q9NYJ7 618 aa6.88□□□□□ -1.31
SPIDR-218ENST00000522222 NINJ2Q9NZG7 142 aa6.88□□□□□ -1.31
SPIDR-218ENST00000522222 SUSD2Q9UGT4 822 aa6.88□□□□□ -1.31
SPIDR-218ENST00000522222 PPM1HQ9ULR3 514 aa6.88□□□□□ -1.31
SPIDR-218ENST00000522222 NCKAP1Q9Y2A7 1128 aa6.88□□□□□ -1.31
SPIDR-218ENST00000522222 WASF2Q9Y6W5 498 aa6.88□□□□□ -1.31
SPIDR-218ENST00000522222 CACNA1AO00555 2505 aa6.87□□□□□ -1.31
SPIDR-218ENST00000522222 SPTBN2O15020 2390 aa6.87□□□□□ -1.31
SPIDR-218ENST00000522222 DCHS1Q96JQ0 3298 aa6.87□□□□□ -1.31
SPIDR-218ENST00000522222 CXorf51AA0A1B0GTR3 108 aa6.87□□□□□ -1.31
SPIDR-218ENST00000522222 A0A1B0GTW7 788 aa6.87□□□□□ -1.31
SPIDR-218ENST00000522222 EXOC1LA0A1B0GW35 172 aa6.87□□□□□ -1.31
SPIDR-218ENST00000522222 ARHGAP42A6NI28 874 aa6.87□□□□□ -1.31
SPIDR-218ENST00000522222 LRRC72A6NJI9 287 aa6.87□□□□□ -1.31
SPIDR-218ENST00000522222 C10orf142B7Z368 130 aa6.87□□□□□ -1.31
SPIDR-218ENST00000522222 DFFAO00273 331 aa6.87□□□□□ -1.31
SPIDR-218ENST00000522222 KPNA3O00505 521 aaPredicted RBP6.87□□□□□ -1.31
SPIDR-218ENST00000522222 SLC7A4O43246 635 aa6.87□□□□□ -1.31
SPIDR-218ENST00000522222 PLRG1O43660 514 aaKnown RBP6.87□□□□□ -1.31
SPIDR-218ENST00000522222 KDELR3O43731 214 aa6.87□□□□□ -1.31
SPIDR-218ENST00000522222 PRAMEF11O60813 436 aa6.87□□□□□ -1.31
SPIDR-218ENST00000522222 ZWINTO95229 277 aa6.87□□□□□ -1.31
SPIDR-218ENST00000522222 GSRP00390 522 aa6.87□□□□□ -1.31
SPIDR-218ENST00000522222 PRNPP04156 253 aa6.87□□□□□ -1.31
SPIDR-218ENST00000522222 IGHV4-34P06331 123 aa6.87□□□□□ -1.31
SPIDR-218ENST00000522222 SERPINF2P08697 491 aa6.87□□□□□ -1.31
SPIDR-218ENST00000522222 ENGP17813 658 aa6.87□□□□□ -1.31
SPIDR-218ENST00000522222 CCND1P24385 295 aa6.87□□□□□ -1.31
SPIDR-218ENST00000522222 GKP32189 559 aa6.87□□□□□ -1.31
SPIDR-218ENST00000522222 ARL4AP40617 200 aa6.87□□□□□ -1.31
SPIDR-218ENST00000522222 SSR1P43307 286 aaKnown RBP6.87□□□□□ -1.31
SPIDR-218ENST00000522222 MAGEA4P43358 317 aa6.87□□□□□ -1.31
SPIDR-218ENST00000522222 MAPK8P45983 427 aa6.87□□□□□ -1.31
SPIDR-218ENST00000522222 SLCO1A2P46721 670 aa6.87□□□□□ -1.31
SPIDR-218ENST00000522222 KCNJ1P48048 391 aa6.87□□□□□ -1.31
SPIDR-218ENST00000522222 ZNF135P52742 658 aaPredicted RBP6.87□□□□□ -1.31
SPIDR-218ENST00000522222 NDST2P52849 883 aa6.87□□□□□ -1.31
SPIDR-218ENST00000522222 LIMK1P53667 647 aa6.87□□□□□ -1.31
SPIDR-218ENST00000522222 CDH6P55285 790 aa6.87□□□□□ -1.31
SPIDR-218ENST00000522222 TAS2R40P59535 323 aa6.87□□□□□ -1.31
SPIDR-218ENST00000522222 ELF3P78545 371 aaPredicted RBP6.87□□□□□ -1.31
SPIDR-218ENST00000522222 IFI35P80217 286 aaPredicted RBP6.87□□□□□ -1.31
SPIDR-218ENST00000522222 FOXK1P85037 733 aa6.87□□□□□ -1.31
SPIDR-218ENST00000522222 SFSWAPQ12872 951 aaKnown RBP6.87□□□□□ -1.31
SPIDR-218ENST00000522222 GRIK2Q13002 908 aa6.87□□□□□ -1.31
SPIDR-218ENST00000522222 KRT81Q14533 505 aa6.87□□□□□ -1.31
SPIDR-218ENST00000522222 PUM1Q14671 1186 aaKnown RBP eCLIP6.87□□□□□ -1.31
SPIDR-218ENST00000522222 LONRF1Q17RB8 773 aa6.87□□□□□ -1.31
SPIDR-218ENST00000522222 DUOXA1Q1HG43 343 aa6.87□□□□□ -1.31
SPIDR-218ENST00000522222 CARD16Q5EG05 197 aa6.87□□□□□ -1.31
SPIDR-218ENST00000522222 TFDP3Q5H9I0 405 aa6.87□□□□□ -1.31
SPIDR-218ENST00000522222 PIP5KL1Q5T9C9 394 aa6.87□□□□□ -1.31
SPIDR-218ENST00000522222 AFMIDQ63HM1 303 aa6.87□□□□□ -1.31
SPIDR-218ENST00000522222 AADACL2Q6P093 401 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 116.1 ms