RNA–Protein interactions for RNA: ENST00000521865.5

PABPC1-218, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-218ENST00000521865 TTC9Q92623 222 aa20.92■□□□□ 0.94
PABPC1-218ENST00000521865 TMEM168Q9H0V1 697 aa20.92■□□□□ 0.94
PABPC1-218ENST00000521865 SEPT3Q9UH03 358 aa20.92■□□□□ 0.94
PABPC1-218ENST00000521865 ATXN7L1Q9ULK2 861 aaPredicted RBP20.92■□□□□ 0.94
PABPC1-218ENST00000521865 SSUH2Q9Y2M2 353 aa20.92■□□□□ 0.94
PABPC1-218ENST00000521865 TMEM191CA6NGB0 347 aa20.91■□□□□ 0.94
PABPC1-218ENST00000521865 LRRC53A6NM62 1247 aa20.91■□□□□ 0.94
PABPC1-218ENST00000521865 GOLGA6L22H0YM25 854 aa20.91■□□□□ 0.94
PABPC1-218ENST00000521865 PDE2AO00408 941 aaPredicted RBP20.91■□□□□ 0.94
PABPC1-218ENST00000521865 ANP32AP39687 249 aaKnown RBP20.91■□□□□ 0.94
PABPC1-218ENST00000521865 LBRQ14739 615 aaKnown RBP20.91■□□□□ 0.94
PABPC1-218ENST00000521865 NCAPHQ15003 741 aa20.91■□□□□ 0.94
PABPC1-218ENST00000521865 CERCAMQ5T4B2 595 aa20.91■□□□□ 0.94
PABPC1-218ENST00000521865 AFMIDQ63HM1 303 aa20.91■□□□□ 0.94
PABPC1-218ENST00000521865 DENND2CQ68D51 928 aa20.91■□□□□ 0.94
PABPC1-218ENST00000521865 TRIM7Q9C029 511 aa20.91■□□□□ 0.94
PABPC1-218ENST00000521865 SEMA4CQ9C0C4 833 aa20.91■□□□□ 0.94
PABPC1-218ENST00000521865 ZWILCHQ9H900 591 aa20.91■□□□□ 0.94
PABPC1-218ENST00000521865 LRIT1Q9P2V4 623 aa20.91■□□□□ 0.94
PABPC1-218ENST00000521865 CNOT8Q9UFF9 292 aaKnown RBP20.91■□□□□ 0.94
PABPC1-218ENST00000521865 MYO6Q9UM54 1294 aa20.91■□□□□ 0.94
PABPC1-218ENST00000521865 LOXL2Q9Y4K0 774 aa20.91■□□□□ 0.94
PABPC1-218ENST00000521865 PCDHGA7Q9Y5G6 932 aa20.91■□□□□ 0.94
PABPC1-218ENST00000521865 HELZ2Q9BYK8 2649 aaKnown RBP20.91■□□□□ 0.94
PABPC1-218ENST00000521865 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP20.9■□□□□ 0.94
PABPC1-218ENST00000521865 TTC24A2A3L6 582 aaPredicted RBP20.9■□□□□ 0.94
PABPC1-218ENST00000521865 J3QKU1 62 aa20.9■□□□□ 0.94
PABPC1-218ENST00000521865 TNFRSF10CO14798 259 aa20.9■□□□□ 0.94
PABPC1-218ENST00000521865 FTLP02792 175 aaPredicted RBP20.9■□□□□ 0.94
PABPC1-218ENST00000521865 CCKBRP32239 447 aa20.9■□□□□ 0.94
PABPC1-218ENST00000521865 ZNF135P52742 658 aaPredicted RBP20.9■□□□□ 0.94
PABPC1-218ENST00000521865 C14orf28Q4W4Y0 310 aa20.9■□□□□ 0.94
PABPC1-218ENST00000521865 TMCO4Q5TGY1 634 aa20.9■□□□□ 0.94
PABPC1-218ENST00000521865 SPECC1LQ69YQ0 1117 aa20.9■□□□□ 0.94
PABPC1-218ENST00000521865 PNCKQ6P2M8 343 aa20.9■□□□□ 0.94
PABPC1-218ENST00000521865 LZTR1Q8N653 840 aa20.9■□□□□ 0.94
PABPC1-218ENST00000521865 ZNF653Q96CK0 615 aa20.9■□□□□ 0.94
PABPC1-218ENST00000521865 PSKH2Q96QS6 385 aa20.9■□□□□ 0.94
PABPC1-218ENST00000521865 SYT11Q9BT88 431 aa20.9■□□□□ 0.94
PABPC1-218ENST00000521865 LGR4Q9BXB1 951 aa20.9■□□□□ 0.94
PABPC1-218ENST00000521865 HSD3B7Q9H2F3 369 aa20.9■□□□□ 0.94
PABPC1-218ENST00000521865 HAUS4Q9H6D7 363 aa20.9■□□□□ 0.94
PABPC1-218ENST00000521865 CWC15Q9P013 229 aaKnown RBP20.9■□□□□ 0.94
PABPC1-218ENST00000521865 MYO1AQ9UBC5 1043 aa20.9■□□□□ 0.94
PABPC1-218ENST00000521865 B4GALT6Q9UBX8 382 aa20.9■□□□□ 0.94
PABPC1-218ENST00000521865 APPL1Q9UKG1 709 aa20.9■□□□□ 0.94
PABPC1-218ENST00000521865 SCINQ9Y6U3 715 aa20.9■□□□□ 0.94
PABPC1-218ENST00000521865 RNF215Q9Y6U7 377 aa20.9■□□□□ 0.94
PABPC1-218ENST00000521865 COL27A1Q8IZC6 1860 aaPredicted RBP20.9■□□□□ 0.94
PABPC1-218ENST00000521865 H3BRJ5 948 aa20.89■□□□□ 0.93
PABPC1-218ENST00000521865 TRAFD1O14545 582 aaPredicted RBP20.89■□□□□ 0.93
PABPC1-218ENST00000521865 NOBOXO60393 691 aa20.89■□□□□ 0.93
PABPC1-218ENST00000521865 HOXC4P09017 264 aaPredicted RBP20.89■□□□□ 0.93
PABPC1-218ENST00000521865 NFKBIAP25963 317 aa20.89■□□□□ 0.93
PABPC1-218ENST00000521865 SLC10A7Q0GE19 358 aa20.89■□□□□ 0.93
PABPC1-218ENST00000521865 TSR1Q2NL82 804 aaKnown RBP20.89■□□□□ 0.93
PABPC1-218ENST00000521865 OGFOD3Q6PK18 319 aa20.89■□□□□ 0.93
PABPC1-218ENST00000521865 SPRED1Q7Z699 444 aa20.89■□□□□ 0.93
PABPC1-218ENST00000521865 PSTKQ8IV42 348 aaKnown RBP20.89■□□□□ 0.93
PABPC1-218ENST00000521865 SFTPA2Q8IWL1 248 aa20.89■□□□□ 0.93
PABPC1-218ENST00000521865 TP53INP2Q8IXH6 220 aa20.89■□□□□ 0.93
PABPC1-218ENST00000521865 CCL4L1Q8NHW4 92 aa20.89■□□□□ 0.93
PABPC1-218ENST00000521865 KIAA1524Q8TCG1 905 aa20.89■□□□□ 0.93
PABPC1-218ENST00000521865 FNIP1Q8TF40 1166 aa20.89■□□□□ 0.93
PABPC1-218ENST00000521865 NUS1Q96E22 293 aa20.89■□□□□ 0.93
PABPC1-218ENST00000521865 ZNF599Q96NL3 588 aa20.89■□□□□ 0.93
PABPC1-218ENST00000521865 NAT10Q9H0A0 1025 aaKnown RBP20.89■□□□□ 0.93
PABPC1-218ENST00000521865 CARS2Q9HA77 564 aaKnown RBP20.89■□□□□ 0.93
PABPC1-218ENST00000521865 PCDHGC4Q9Y5F7 938 aa20.89■□□□□ 0.93
PABPC1-218ENST00000521865 RP1P56715 2156 aa20.89■□□□□ 0.93
PABPC1-218ENST00000521865 PRSS38A1L453 326 aa20.88■□□□□ 0.93
PABPC1-218ENST00000521865 GOLGA6CA6NDK9 693 aa20.88■□□□□ 0.93
PABPC1-218ENST00000521865 GOLGA6BA6NDN3 693 aa20.88■□□□□ 0.93
PABPC1-218ENST00000521865 LRCH4O75427 683 aa20.88■□□□□ 0.93
PABPC1-218ENST00000521865 CPP00450 1065 aa20.88■□□□□ 0.93
PABPC1-218ENST00000521865 GOLGA6DP0CG33 693 aa20.88■□□□□ 0.93
PABPC1-218ENST00000521865 PNLIPP16233 465 aa20.88■□□□□ 0.93
PABPC1-218ENST00000521865 ITIH1P19827 911 aa20.88■□□□□ 0.93
PABPC1-218ENST00000521865 TRIM23P36406 574 aa20.88■□□□□ 0.93
PABPC1-218ENST00000521865 ARL4AP40617 200 aa20.88■□□□□ 0.93
PABPC1-218ENST00000521865 HCAR3P49019 387 aa20.88■□□□□ 0.93
PABPC1-218ENST00000521865 BIRC2Q13490 618 aa20.88■□□□□ 0.93
PABPC1-218ENST00000521865 TGIF1Q15583 401 aa20.88■□□□□ 0.93
PABPC1-218ENST00000521865 MAP9Q49MG5 647 aa20.88■□□□□ 0.93
PABPC1-218ENST00000521865 FILIP1LQ4L180 1135 aa20.88■□□□□ 0.93
PABPC1-218ENST00000521865 PHF19Q5T6S3 580 aa20.88■□□□□ 0.93
PABPC1-218ENST00000521865 BBS5Q8N3I7 341 aa20.88■□□□□ 0.93
PABPC1-218ENST00000521865 NSMCE1Q8WV22 266 aa20.88■□□□□ 0.93
PABPC1-218ENST00000521865 HSPH1Q92598 858 aa20.88■□□□□ 0.93
PABPC1-218ENST00000521865 MED8Q96G25 268 aa20.88■□□□□ 0.93
PABPC1-218ENST00000521865 CMKLR1Q99788 373 aa20.88■□□□□ 0.93
PABPC1-218ENST00000521865 PHPT1Q9NRX4 125 aaPredicted RBP20.88■□□□□ 0.93
PABPC1-218ENST00000521865 GOLGA6AQ9NYA3 693 aa20.88■□□□□ 0.93
PABPC1-218ENST00000521865 ZNF462Q96JM2 2506 aa20.88■□□□□ 0.93
PABPC1-218ENST00000521865 A0A1W2PQ67 120 aa20.87■□□□□ 0.93
PABPC1-218ENST00000521865 NUDT21O43809 227 aaKnown RBP20.87■□□□□ 0.93
PABPC1-218ENST00000521865 MYCLP1P12525 358 aaPredicted RBP20.87■□□□□ 0.93
PABPC1-218ENST00000521865 GM2AP17900 193 aa20.87■□□□□ 0.93
PABPC1-218ENST00000521865 MAPK10P53779 464 aa20.87■□□□□ 0.93
PABPC1-218ENST00000521865 TYRO3Q06418 890 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms