RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 ATXN1LP0C7T5 689 aaKnown RBP20.7■□□□□ 0.9
TRIM35-203ENST00000521253 CYP2A6P11509 494 aaPredicted RBP20.7■□□□□ 0.9
TRIM35-203ENST00000521253 NME1P15531 152 aaKnown RBP20.7■□□□□ 0.9
TRIM35-203ENST00000521253 RWDD2BP57060 319 aa20.7■□□□□ 0.9
TRIM35-203ENST00000521253 SKOR1P84550 965 aa20.7■□□□□ 0.9
TRIM35-203ENST00000521253 EIF2B5Q13144 721 aaKnown RBP20.7■□□□□ 0.9
TRIM35-203ENST00000521253 PTK2BQ14289 1009 aa20.7■□□□□ 0.9
TRIM35-203ENST00000521253 INPP5AQ14642 412 aa20.7■□□□□ 0.9
TRIM35-203ENST00000521253 ACOX1Q15067 660 aa20.7■□□□□ 0.9
TRIM35-203ENST00000521253 TSPAN33Q86UF1 283 aa20.7■□□□□ 0.9
TRIM35-203ENST00000521253 SLCO6A1Q86UG4 719 aa20.7■□□□□ 0.9
TRIM35-203ENST00000521253 ZC3H18Q86VM9 953 aaKnown RBP20.7■□□□□ 0.9
TRIM35-203ENST00000521253 PLA2G15Q8NCC3 412 aa20.7■□□□□ 0.9
TRIM35-203ENST00000521253 TFB1MQ8WVM0 346 aaKnown RBP20.7■□□□□ 0.9
TRIM35-203ENST00000521253 COQ10AQ96MF6 247 aa20.7■□□□□ 0.9
TRIM35-203ENST00000521253 TOR4AQ9NXH8 423 aa20.7■□□□□ 0.9
TRIM35-203ENST00000521253 KLF15Q9UIH9 416 aa20.7■□□□□ 0.9
TRIM35-203ENST00000521253 WASF3Q9UPY6 502 aa20.7■□□□□ 0.9
TRIM35-203ENST00000521253 A0A0J9YYE9 177 aa20.69■□□□□ 0.9
TRIM35-203ENST00000521253 A0A0U1RQS6 177 aa20.69■□□□□ 0.9
TRIM35-203ENST00000521253 ARHGAP6O43182 974 aa20.69■□□□□ 0.9
TRIM35-203ENST00000521253 TOP3BO95985 862 aaKnown RBP20.69■□□□□ 0.9
TRIM35-203ENST00000521253 TRBC1P01850 177 aa20.69■□□□□ 0.9
TRIM35-203ENST00000521253 CA4P22748 312 aa20.69■□□□□ 0.9
TRIM35-203ENST00000521253 PTPN3P26045 913 aa20.69■□□□□ 0.9
TRIM35-203ENST00000521253 HNF1BP35680 557 aa20.69■□□□□ 0.9
TRIM35-203ENST00000521253 EPHB1P54762 984 aa20.69■□□□□ 0.9
TRIM35-203ENST00000521253 TEX44Q53QW1 395 aa20.69■□□□□ 0.9
TRIM35-203ENST00000521253 DENND2CQ68D51 928 aa20.69■□□□□ 0.9
TRIM35-203ENST00000521253 MACC1Q6ZN28 852 aa20.69■□□□□ 0.9
TRIM35-203ENST00000521253 PEX26Q7Z412 305 aa20.69■□□□□ 0.9
TRIM35-203ENST00000521253 HSD11B1LQ7Z5J1 315 aa20.69■□□□□ 0.9
TRIM35-203ENST00000521253 SYCE1Q8N0S2 351 aa20.69■□□□□ 0.9
TRIM35-203ENST00000521253 NDUFAF2Q8N183 169 aa20.69■□□□□ 0.9
TRIM35-203ENST00000521253 CBARPQ8N350 705 aaPredicted RBP20.69■□□□□ 0.9
TRIM35-203ENST00000521253 PNPLA1Q8N8W4 532 aa20.69■□□□□ 0.9
TRIM35-203ENST00000521253 CCDC112Q8NEF3 446 aa20.69■□□□□ 0.9
TRIM35-203ENST00000521253 OSBPL8Q9BZF1 889 aa20.69■□□□□ 0.9
TRIM35-203ENST00000521253 PCDH9Q9HC56 1237 aa20.69■□□□□ 0.9
TRIM35-203ENST00000521253 ANGPTL2Q9UKU9 493 aa20.69■□□□□ 0.9
TRIM35-203ENST00000521253 AMFRQ9UKV5 643 aa20.69■□□□□ 0.9
TRIM35-203ENST00000521253 PNMA8BQ9ULN7 279 aaPredicted RBP20.69■□□□□ 0.9
TRIM35-203ENST00000521253 OR1A2Q9Y585 309 aa20.69■□□□□ 0.9
TRIM35-203ENST00000521253 CHD8Q9HCK8 2581 aa20.68■□□□□ 0.9
TRIM35-203ENST00000521253 APOC4-APOC2K7ER74 178 aa20.68■□□□□ 0.9
TRIM35-203ENST00000521253 LDOC1O95751 146 aaPredicted RBP20.68■□□□□ 0.9
TRIM35-203ENST00000521253 FTCDO95954 541 aa20.68■□□□□ 0.9
TRIM35-203ENST00000521253 APOC2P02655 101 aa20.68■□□□□ 0.9
TRIM35-203ENST00000521253 PYGMP11217 842 aa20.68■□□□□ 0.9
TRIM35-203ENST00000521253 JUNDP17535 347 aa20.68■□□□□ 0.9
TRIM35-203ENST00000521253 PTPN7P35236 360 aa20.68■□□□□ 0.9
TRIM35-203ENST00000521253 HNRNPKP61978 463 aaKnown RBP eCLIP20.68■□□□□ 0.9
TRIM35-203ENST00000521253 SHC2P98077 582 aa20.68■□□□□ 0.9
TRIM35-203ENST00000521253 MTM1Q13496 603 aa20.68■□□□□ 0.9
TRIM35-203ENST00000521253 ARHGEF7Q14155 803 aa20.68■□□□□ 0.9
TRIM35-203ENST00000521253 AADACL2Q6P093 401 aa20.68■□□□□ 0.9
TRIM35-203ENST00000521253 LPCAT1Q8NF37 534 aa20.68■□□□□ 0.9
TRIM35-203ENST00000521253 IMP4Q96G21 291 aaKnown RBP20.68■□□□□ 0.9
TRIM35-203ENST00000521253 CNDP2Q96KP4 475 aaKnown RBP20.68■□□□□ 0.9
TRIM35-203ENST00000521253 RBM15Q96T37 977 aaKnown RBP eCLIP20.68■□□□□ 0.9
TRIM35-203ENST00000521253 APOOQ9BUR5 198 aa20.68■□□□□ 0.9
TRIM35-203ENST00000521253 SLC25A51Q9H1U9 297 aa20.68■□□□□ 0.9
TRIM35-203ENST00000521253 PACSIN2Q9UNF0 486 aaPredicted RBP20.68■□□□□ 0.9
TRIM35-203ENST00000521253 APOBEC2Q9Y235 224 aaKnown RBP20.68■□□□□ 0.9
TRIM35-203ENST00000521253 EFR3BQ9Y2G0 817 aa20.68■□□□□ 0.9
TRIM35-203ENST00000521253 CAPN6Q9Y6Q1 641 aa20.68■□□□□ 0.9
TRIM35-203ENST00000521253 LRRK1Q38SD2 2015 aa20.68■□□□□ 0.9
TRIM35-203ENST00000521253 PSMD11O00231 422 aa20.67■□□□□ 0.9
TRIM35-203ENST00000521253 TRIM38O00635 465 aa20.67■□□□□ 0.9
TRIM35-203ENST00000521253 FFAR2O15552 330 aa20.67■□□□□ 0.9
TRIM35-203ENST00000521253 TRIM16O95361 564 aa20.67■□□□□ 0.9
TRIM35-203ENST00000521253 SPINK2P20155 84 aa20.67■□□□□ 0.9
TRIM35-203ENST00000521253 ETV3P41162 512 aa20.67■□□□□ 0.9
TRIM35-203ENST00000521253 RPL26P61254 145 aaKnown RBP20.67■□□□□ 0.9
TRIM35-203ENST00000521253 WASHC5Q12768 1159 aa20.67■□□□□ 0.9
TRIM35-203ENST00000521253 NFATC4Q14934 902 aa20.67■□□□□ 0.9
TRIM35-203ENST00000521253 CCDC181Q5TID7 509 aa20.67■□□□□ 0.9
TRIM35-203ENST00000521253 LRRC66Q68CR7 880 aa20.67■□□□□ 0.9
TRIM35-203ENST00000521253 CRTC1Q6UUV9 634 aa20.67■□□□□ 0.9
TRIM35-203ENST00000521253 LRRC8AQ8IWT6 810 aa20.67■□□□□ 0.9
TRIM35-203ENST00000521253 RBFAQ8N0V3 343 aa20.67■□□□□ 0.9
TRIM35-203ENST00000521253 PELI3Q8N2H9 469 aa20.67■□□□□ 0.9
TRIM35-203ENST00000521253 RNF10Q8N5U6 811 aaKnown RBP20.67■□□□□ 0.9
TRIM35-203ENST00000521253 ZNF548Q8NEK5 533 aaPredicted RBP20.67■□□□□ 0.9
TRIM35-203ENST00000521253 NUS1Q96E22 293 aa20.67■□□□□ 0.9
TRIM35-203ENST00000521253 DTD2Q96FN9 168 aa20.67■□□□□ 0.9
TRIM35-203ENST00000521253 TEKT5Q96M29 485 aa20.67■□□□□ 0.9
TRIM35-203ENST00000521253 QKIQ96PU8 341 aaKnown RBP eCLIP20.67■□□□□ 0.9
TRIM35-203ENST00000521253 TSGA10Q9BZW7 698 aa20.67■□□□□ 0.9
TRIM35-203ENST00000521253 TCEAL2Q9H3H9 227 aaPredicted RBP20.67■□□□□ 0.9
TRIM35-203ENST00000521253 GLOD4Q9HC38 313 aa20.67■□□□□ 0.9
TRIM35-203ENST00000521253 RPL26L1Q9UNX3 145 aaKnown RBP20.67■□□□□ 0.9
TRIM35-203ENST00000521253 CAPN8A6NHC0 703 aa20.66■□□□□ 0.9
TRIM35-203ENST00000521253 MIF4GDA9UHW6 222 aaKnown RBP20.66■□□□□ 0.9
TRIM35-203ENST00000521253 H3BM21 787 aa20.66■□□□□ 0.9
TRIM35-203ENST00000521253 K7ESM1 405 aa20.66■□□□□ 0.9
TRIM35-203ENST00000521253 ENC1O14682 589 aa20.66■□□□□ 0.9
TRIM35-203ENST00000521253 HYAL3O43820 417 aaPredicted RBP20.66■□□□□ 0.9
TRIM35-203ENST00000521253 DKK1O94907 266 aa20.66■□□□□ 0.9
TRIM35-203ENST00000521253 GIMD1P0DJR0 217 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms