RNA–Protein interactions for RNA: ENST00000520991.3

CLN8-205, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5 BASIC

Gene CLN8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-205ENST00000520991 FUBP1Q96AE4 644 aaKnown RBP15.88■□□□□ 0.13
CLN8-205ENST00000520991 GRAMD1AQ96CP6 724 aa15.88■□□□□ 0.13
CLN8-205ENST00000520991 PDXPQ96GD0 296 aa15.88■□□□□ 0.13
CLN8-205ENST00000520991 NSMCE3Q96MG7 304 aa15.88■□□□□ 0.13
CLN8-205ENST00000520991 LGMNQ99538 433 aa15.88■□□□□ 0.13
CLN8-205ENST00000520991 MGME1Q9BQP7 344 aa15.88■□□□□ 0.13
CLN8-205ENST00000520991 WDR26Q9H7D7 661 aa15.88■□□□□ 0.13
CLN8-205ENST00000520991 NOD2Q9HC29 1040 aa15.88■□□□□ 0.13
CLN8-205ENST00000520991 RCOR3Q9P2K3 495 aaPredicted RBP15.88■□□□□ 0.13
CLN8-205ENST00000520991 HTRA2O43464 458 aaPredicted RBP15.87■□□□□ 0.13
CLN8-205ENST00000520991 CR2P20023 1033 aa15.87■□□□□ 0.13
CLN8-205ENST00000520991 PTMSP20962 102 aa15.87■□□□□ 0.13
CLN8-205ENST00000520991 VIPR1P32241 457 aa15.87■□□□□ 0.13
CLN8-205ENST00000520991 SPIDRQ14159 915 aa15.87■□□□□ 0.13
CLN8-205ENST00000520991 SOWAHCQ53LP3 525 aaPredicted RBP15.87■□□□□ 0.13
CLN8-205ENST00000520991 RALGPS1Q5JS13 557 aa15.87■□□□□ 0.13
CLN8-205ENST00000520991 DENND2CQ68D51 928 aa15.87■□□□□ 0.13
CLN8-205ENST00000520991 NYAP1Q6ZVC0 841 aa15.87■□□□□ 0.13
CLN8-205ENST00000520991 ZNF248Q8NDW4 579 aa15.87■□□□□ 0.13
CLN8-205ENST00000520991 ZNF564Q8TBZ8 553 aaPredicted RBP15.87■□□□□ 0.13
CLN8-205ENST00000520991 OR1E3Q8WZA6 343 aa15.87■□□□□ 0.13
CLN8-205ENST00000520991 SPOCK2Q92563 424 aa15.87■□□□□ 0.13
CLN8-205ENST00000520991 NUS1Q96E22 293 aa15.87■□□□□ 0.13
CLN8-205ENST00000520991 ATXN7L3BQ96GX2 97 aa15.87■□□□□ 0.13
CLN8-205ENST00000520991 RBM15Q96T37 977 aaKnown RBP eCLIP15.87■□□□□ 0.132e-6■■■■□ 23.2
CLN8-205ENST00000520991 FGF22Q9HCT0 170 aa15.87■□□□□ 0.13
CLN8-205ENST00000520991 THSD1Q9NS62 852 aa15.87■□□□□ 0.13
CLN8-205ENST00000520991 MOSPD1Q9UJG1 213 aa15.87■□□□□ 0.13
CLN8-205ENST00000520991 SATB2Q9UPW6 733 aa15.87■□□□□ 0.13
CLN8-205ENST00000520991 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.87■□□□□ 0.13
CLN8-205ENST00000520991 DGKBQ9Y6T7 804 aa15.87■□□□□ 0.13
CLN8-205ENST00000520991 IGSF10Q6WRI0 2623 aa15.86■□□□□ 0.13
CLN8-205ENST00000520991 TMEM202A6NGA9 273 aa15.86■□□□□ 0.13
CLN8-205ENST00000520991 EIF4E1BA6NMX2 242 aaKnown RBP15.86■□□□□ 0.13
CLN8-205ENST00000520991 DXOO77932 396 aaKnown RBP15.86■□□□□ 0.13
CLN8-205ENST00000520991 CYP2A6P11509 494 aaPredicted RBP15.86■□□□□ 0.13
CLN8-205ENST00000520991 GM2AP17900 193 aa15.86■□□□□ 0.13
CLN8-205ENST00000520991 CASP14P31944 242 aa15.86■□□□□ 0.13
CLN8-205ENST00000520991 ERVPABLB-1P60509 514 aa15.86■□□□□ 0.13
CLN8-205ENST00000520991 TRAF2Q12933 501 aa15.86■□□□□ 0.13
CLN8-205ENST00000520991 MMRN1Q13201 1228 aa15.86■□□□□ 0.13
CLN8-205ENST00000520991 COL9A2Q14055 689 aaPredicted RBP15.86■□□□□ 0.13
CLN8-205ENST00000520991 CNGA3Q16281 694 aa15.86■□□□□ 0.13
CLN8-205ENST00000520991 KCTD16Q68DU8 428 aa15.86■□□□□ 0.13
CLN8-205ENST00000520991 TAF8Q7Z7C8 310 aa15.86■□□□□ 0.13
CLN8-205ENST00000520991 LRRC49Q8IUZ0 686 aa15.86■□□□□ 0.13
CLN8-205ENST00000520991 CCDC74AQ96AQ1 378 aa15.86■□□□□ 0.13
CLN8-205ENST00000520991 NAF1Q96HR8 494 aaKnown RBP15.86■□□□□ 0.13
CLN8-205ENST00000520991 COQ10AQ96MF6 247 aa15.86■□□□□ 0.13
CLN8-205ENST00000520991 NT5MQ9NPB1 228 aa15.86■□□□□ 0.13
CLN8-205ENST00000520991 MRPL40Q9NQ50 206 aaKnown RBP15.86■□□□□ 0.13
CLN8-205ENST00000520991 CTTNBP2NLQ9P2B4 639 aa15.86■□□□□ 0.13
CLN8-205ENST00000520991 PHTF1Q9UMS5 762 aa15.86■□□□□ 0.13
CLN8-205ENST00000520991 ENTPD2Q9Y5L3 495 aa15.86■□□□□ 0.13
CLN8-205ENST00000520991 LRP4O75096 1905 aa15.86■□□□□ 0.13
CLN8-205ENST00000520991 ASXL3Q9C0F0 2248 aa15.85■□□□□ 0.13
CLN8-205ENST00000520991 GOLGA6CA6NDK9 693 aa15.85■□□□□ 0.13
CLN8-205ENST00000520991 GOLGA6BA6NDN3 693 aa15.85■□□□□ 0.13
CLN8-205ENST00000520991 PDE2AO00408 941 aaPredicted RBP15.85■□□□□ 0.13
CLN8-205ENST00000520991 TNFRSF10CO14798 259 aa15.85■□□□□ 0.13
CLN8-205ENST00000520991 MFSD11O43934 449 aa15.85■□□□□ 0.13
CLN8-205ENST00000520991 HEXIM1O94992 359 aaKnown RBP15.85■□□□□ 0.13
CLN8-205ENST00000520991 PGLSO95336 258 aa15.85■□□□□ 0.13
CLN8-205ENST00000520991 HOXC4P09017 264 aaPredicted RBP15.85■□□□□ 0.13
CLN8-205ENST00000520991 CD48P09326 243 aa15.85■□□□□ 0.13
CLN8-205ENST00000520991 GOLGA6DP0CG33 693 aa15.85■□□□□ 0.13
CLN8-205ENST00000520991 RBMS1P29558 406 aaKnown RBP15.85■□□□□ 0.13
CLN8-205ENST00000520991 TRIM23P36406 574 aa15.85■□□□□ 0.13
CLN8-205ENST00000520991 ITKQ08881 620 aa15.85■□□□□ 0.13
CLN8-205ENST00000520991 ARHGEF7Q14155 803 aa15.85■□□□□ 0.13
CLN8-205ENST00000520991 ZSCAN23Q3MJ62 389 aa15.85■□□□□ 0.13
CLN8-205ENST00000520991 ARMC12Q5T9G4 340 aa15.85■□□□□ 0.13
CLN8-205ENST00000520991 PNCKQ6P2M8 343 aa15.85■□□□□ 0.13
CLN8-205ENST00000520991 FOXR1Q6PIV2 292 aa15.85■□□□□ 0.13
CLN8-205ENST00000520991 USP45Q70EL2 814 aa15.85■□□□□ 0.13
CLN8-205ENST00000520991 SPACA3Q8IXA5 215 aa15.85■□□□□ 0.13
CLN8-205ENST00000520991 KCTD6Q8NC69 237 aa15.85■□□□□ 0.13
CLN8-205ENST00000520991 FAM46DQ8NEK8 389 aa15.85■□□□□ 0.13
CLN8-205ENST00000520991 OR6C4Q8NGE1 309 aa15.85■□□□□ 0.13
CLN8-205ENST00000520991 CTNNBL1Q8WYA6 563 aaPredicted RBP15.85■□□□□ 0.13
CLN8-205ENST00000520991 HIC2Q96JB3 615 aa15.85■□□□□ 0.13
CLN8-205ENST00000520991 FCRL3Q96P31 734 aaPredicted RBP15.85■□□□□ 0.13
CLN8-205ENST00000520991 XPO4Q9C0E2 1151 aaKnown RBP15.85■□□□□ 0.13
CLN8-205ENST00000520991 CYP4F12Q9HCS2 524 aa15.85■□□□□ 0.13
CLN8-205ENST00000520991 PHPT1Q9NRX4 125 aaPredicted RBP15.85■□□□□ 0.13
CLN8-205ENST00000520991 KCTD5Q9NXV2 234 aa15.85■□□□□ 0.13
CLN8-205ENST00000520991 GOLGA6AQ9NYA3 693 aa15.85■□□□□ 0.13
CLN8-205ENST00000520991 RAI2Q9Y5P3 530 aa15.85■□□□□ 0.13
CLN8-205ENST00000520991 SMG1Q96Q15 3661 aaKnown RBP15.84■□□□□ 0.13
CLN8-205ENST00000520991 SHROOM3Q8TF72 1996 aa15.84■□□□□ 0.13
CLN8-205ENST00000520991 CASC3O15234 703 aaKnown RBP15.84■□□□□ 0.13
CLN8-205ENST00000520991 MYCLP1P12525 358 aaPredicted RBP15.84■□□□□ 0.13
CLN8-205ENST00000520991 KRT10P13645 584 aa15.84■□□□□ 0.13
CLN8-205ENST00000520991 IL4RP24394 825 aa15.84■□□□□ 0.13
CLN8-205ENST00000520991 GARSP41250 739 aaKnown RBP15.84■□□□□ 0.13
CLN8-205ENST00000520991 TLE3Q04726 772 aa15.84■□□□□ 0.13
CLN8-205ENST00000520991 DPYSL3Q14195 570 aa15.84■□□□□ 0.13
CLN8-205ENST00000520991 TSR1Q2NL82 804 aaKnown RBP15.84■□□□□ 0.13
CLN8-205ENST00000520991 ZFYVE27Q5T4F4 411 aa15.84■□□□□ 0.13
CLN8-205ENST00000520991 BROXQ5VW32 411 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms