RNA–Protein interactions for RNA: ENST00000520948.5

VEGFA-222, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,199 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-222ENST00000520948 TTC7BQ86TV6 843 aa18.25■□□□□ 0.51
VEGFA-222ENST00000520948 PRELID2Q8N945 189 aa18.25■□□□□ 0.51
VEGFA-222ENST00000520948 BIRC7Q96CA5 298 aa18.25■□□□□ 0.51
VEGFA-222ENST00000520948 FCRL5Q96RD9 977 aa18.25■□□□□ 0.51
VEGFA-222ENST00000520948 TMEM121Q9BTD3 319 aa18.25■□□□□ 0.51
VEGFA-222ENST00000520948 CFAP69A5D8W1 941 aa18.24■□□□□ 0.51
VEGFA-222ENST00000520948 GCATO75600 419 aa18.24■□□□□ 0.51
VEGFA-222ENST00000520948 PGLSO95336 258 aa18.24■□□□□ 0.51
VEGFA-222ENST00000520948 ITGAVP06756 1048 aa18.24■□□□□ 0.51
VEGFA-222ENST00000520948 PDHA1P08559 390 aa18.24■□□□□ 0.51
VEGFA-222ENST00000520948 NFKB1P19838 968 aa18.24■□□□□ 0.51
VEGFA-222ENST00000520948 CD86P42081 329 aa18.24■□□□□ 0.51
VEGFA-222ENST00000520948 GDF10P55107 478 aa18.24■□□□□ 0.51
VEGFA-222ENST00000520948 IL9RQ01113 521 aa18.24■□□□□ 0.51
VEGFA-222ENST00000520948 TEAD4Q15561 434 aa18.24■□□□□ 0.51
VEGFA-222ENST00000520948 COL28A1Q2UY09 1125 aa18.24■□□□□ 0.51
VEGFA-222ENST00000520948 CCDC157Q569K6 752 aa18.24■□□□□ 0.51
VEGFA-222ENST00000520948 NEK5Q6P3R8 708 aa18.24■□□□□ 0.51
VEGFA-222ENST00000520948 CREG2Q8IUH2 290 aa18.24■□□□□ 0.51
VEGFA-222ENST00000520948 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.24■□□□□ 0.51
VEGFA-222ENST00000520948 PIH1D2Q8WWB5 315 aa18.24■□□□□ 0.51
VEGFA-222ENST00000520948 SPATA13Q96N96 652 aa18.24■□□□□ 0.51
VEGFA-222ENST00000520948 RBM15Q96T37 977 aaKnown RBP eCLIP18.24■□□□□ 0.513e-9■■□□□ 11.7
VEGFA-222ENST00000520948 CDC6Q99741 560 aa18.24■□□□□ 0.51
VEGFA-222ENST00000520948 FERMT1Q9BQL6 677 aa18.24■□□□□ 0.51
VEGFA-222ENST00000520948 GORASP1Q9BQQ3 440 aa18.24■□□□□ 0.51
VEGFA-222ENST00000520948 TDRD1Q9BXT4 1180 aaKnown RBP18.24■□□□□ 0.51
VEGFA-222ENST00000520948 PREBQ9HCU5 417 aa18.24■□□□□ 0.51
VEGFA-222ENST00000520948 HOMER3Q9NSC5 361 aa18.24■□□□□ 0.51
VEGFA-222ENST00000520948 KLHL8Q9P2G9 620 aaPredicted RBP18.24■□□□□ 0.51
VEGFA-222ENST00000520948 ANKRD6Q9Y2G4 727 aa18.24■□□□□ 0.51
VEGFA-222ENST00000520948 RAXQ9Y2V3 346 aa18.24■□□□□ 0.51
VEGFA-222ENST00000520948 TTLL3Q9Y4R7 772 aa18.24■□□□□ 0.51
VEGFA-222ENST00000520948 PCDHGB2Q9Y5G2 931 aa18.24■□□□□ 0.51
VEGFA-222ENST00000520948 RAI2Q9Y5P3 530 aa18.24■□□□□ 0.51
VEGFA-222ENST00000520948 SAR1BQ9Y6B6 198 aa18.24■□□□□ 0.51
VEGFA-222ENST00000520948 TBC1D3DA0A087WVF3 549 aa18.23■□□□□ 0.51
VEGFA-222ENST00000520948 TBC1D3IA0A087WXS9 549 aa18.23■□□□□ 0.51
VEGFA-222ENST00000520948 TBC1D3EA0A087X179 549 aa18.23■□□□□ 0.51
VEGFA-222ENST00000520948 TBC1D3KA0A087X1G2 549 aa18.23■□□□□ 0.51
VEGFA-222ENST00000520948 TBC1D3FA6NER0 549 aaPredicted RBP18.23■□□□□ 0.51
VEGFA-222ENST00000520948 LRRC72A6NJI9 287 aa18.23■□□□□ 0.51
VEGFA-222ENST00000520948 TBC1D3LB9A6J9 549 aa18.23■□□□□ 0.51
VEGFA-222ENST00000520948 PGRMC1O00264 195 aaKnown RBP18.23■□□□□ 0.51
VEGFA-222ENST00000520948 IGHV4-34P06331 123 aa18.23■□□□□ 0.51
VEGFA-222ENST00000520948 TBC1D3HP0C7X1 549 aa18.23■□□□□ 0.51
VEGFA-222ENST00000520948 ITIH2P19823 946 aa18.23■□□□□ 0.51
VEGFA-222ENST00000520948 CCR5P51681 352 aa18.23■□□□□ 0.51
VEGFA-222ENST00000520948 POLR2LP62875 67 aaKnown RBP18.23■□□□□ 0.51
VEGFA-222ENST00000520948 SNX1Q13596 522 aa18.23■□□□□ 0.51
VEGFA-222ENST00000520948 CYP1B1Q16678 543 aa18.23■□□□□ 0.51
VEGFA-222ENST00000520948 TMEM52BQ4KMG9 183 aa18.23■□□□□ 0.51
VEGFA-222ENST00000520948 KIAA0895LQ68EN5 471 aa18.23■□□□□ 0.51
VEGFA-222ENST00000520948 TBC1D3GQ6DHY5 549 aa18.23■□□□□ 0.51
VEGFA-222ENST00000520948 TBC1D3CQ6IPX1 549 aa18.23■□□□□ 0.51
VEGFA-222ENST00000520948 DBX2Q6ZNG2 339 aa18.23■□□□□ 0.51
VEGFA-222ENST00000520948 KLHDC8BQ8IXV7 354 aa18.23■□□□□ 0.51
VEGFA-222ENST00000520948 TBC1D3Q8IZP1 549 aaPredicted RBP18.23■□□□□ 0.51
VEGFA-222ENST00000520948 FAM71DQ8N9W8 422 aa18.23■□□□□ 0.51
VEGFA-222ENST00000520948 SPATA22Q8NHS9 363 aa18.23■□□□□ 0.51
VEGFA-222ENST00000520948 TRIB3Q96RU7 358 aa18.23■□□□□ 0.51
VEGFA-222ENST00000520948 NAP1L3Q99457 506 aaPredicted RBP18.23■□□□□ 0.51
VEGFA-222ENST00000520948 ORAI3Q9BRQ5 295 aa18.23■□□□□ 0.51
VEGFA-222ENST00000520948 SMARCAL1Q9NZC9 954 aa18.23■□□□□ 0.51
VEGFA-222ENST00000520948 PHTF1Q9UMS5 762 aa18.23■□□□□ 0.51
VEGFA-222ENST00000520948 NBEAQ8NFP9 2946 aa18.23■□□□□ 0.51
VEGFA-222ENST00000520948 ANKRD11Q6UB99 2663 aaPredicted RBP18.23■□□□□ 0.51
VEGFA-222ENST00000520948 FAM47DPA6NHR8 397 aa18.22■□□□□ 0.51
VEGFA-222ENST00000520948 RIOK3O14730 519 aaKnown RBP18.22■□□□□ 0.51
VEGFA-222ENST00000520948 LATO43561 262 aa18.22■□□□□ 0.51
VEGFA-222ENST00000520948 TSPAN6O43657 245 aa18.22■□□□□ 0.51
VEGFA-222ENST00000520948 MT-CYBP00156 380 aaPredicted RBP18.22■□□□□ 0.51
VEGFA-222ENST00000520948 GRIA4P48058 902 aa18.22■□□□□ 0.51
VEGFA-222ENST00000520948 ARMC12Q5T9G4 340 aa18.22■□□□□ 0.51
VEGFA-222ENST00000520948 KDELC1Q6UW63 502 aa18.22■□□□□ 0.51
VEGFA-222ENST00000520948 SYT10Q6XYQ8 523 aa18.22■□□□□ 0.51
VEGFA-222ENST00000520948 TMPRSS7Q7RTY8 843 aa18.22■□□□□ 0.51
VEGFA-222ENST00000520948 TRIM69Q86WT6 500 aa18.22■□□□□ 0.51
VEGFA-222ENST00000520948 CCDC110Q8TBZ0 833 aa18.22■□□□□ 0.51
VEGFA-222ENST00000520948 OXNAD1Q96HP4 312 aaPredicted RBP18.22■□□□□ 0.51
VEGFA-222ENST00000520948 GBA3Q9H227 469 aa18.22■□□□□ 0.51
VEGFA-222ENST00000520948 EBF2Q9HAK2 575 aa18.22■□□□□ 0.51
VEGFA-222ENST00000520948 GGT7Q9UJ14 662 aa18.22■□□□□ 0.51
VEGFA-222ENST00000520948 ZFR2Q9UPR6 939 aaKnown RBP18.22■□□□□ 0.51
VEGFA-222ENST00000520948 ZNF148Q9UQR1 794 aa18.22■□□□□ 0.51
VEGFA-222ENST00000520948 LAMA5O15230 3695 aa18.21■□□□□ 0.51
VEGFA-222ENST00000520948 FAM149AA5PLN7 773 aa18.21■□□□□ 0.51
VEGFA-222ENST00000520948 H0Y8X5 98 aa18.21■□□□□ 0.51
VEGFA-222ENST00000520948 STK10O94804 968 aaKnown RBP18.21■□□□□ 0.51
VEGFA-222ENST00000520948 CD27P26842 260 aa18.21■□□□□ 0.51
VEGFA-222ENST00000520948 CASQ1P31415 396 aa18.21■□□□□ 0.51
VEGFA-222ENST00000520948 RPL26P61254 145 aaKnown RBP18.21■□□□□ 0.51
VEGFA-222ENST00000520948 PPP2CBP62714 309 aa18.21■□□□□ 0.51
VEGFA-222ENST00000520948 PPP2CAP67775 309 aa18.21■□□□□ 0.51
VEGFA-222ENST00000520948 SUZ12Q15022 739 aaKnown RBP18.21■□□□□ 0.51
VEGFA-222ENST00000520948 P3H1Q32P28 736 aa18.21■□□□□ 0.51
VEGFA-222ENST00000520948 TMEM259Q4ZIN3 620 aa18.21■□□□□ 0.51
VEGFA-222ENST00000520948 LRRC73Q5JTD7 316 aa18.21■□□□□ 0.51
VEGFA-222ENST00000520948 ITPRIPL1Q6GPH6 555 aa18.21■□□□□ 0.51
VEGFA-222ENST00000520948 PDZD3Q86UT5 571 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms