RNA–Protein interactions for RNA: ENST00000520602.5

MCF2-209, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,945 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-209ENST00000520602 SYCE1LA8MT33 242 aa10.18□□□□□ -0.78
MCF2-209ENST00000520602 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.18□□□□□ -0.78
MCF2-209ENST00000520602 MRASO14807 208 aa10.18□□□□□ -0.78
MCF2-209ENST00000520602 GSTA4O15217 222 aa10.18□□□□□ -0.78
MCF2-209ENST00000520602 ZBTB14O43829 449 aa10.18□□□□□ -0.78
MCF2-209ENST00000520602 ME2P23368 584 aa10.18□□□□□ -0.78
MCF2-209ENST00000520602 GABRR2P28476 465 aa10.18□□□□□ -0.78
MCF2-209ENST00000520602 TM4SF4P48230 202 aa10.18□□□□□ -0.78
MCF2-209ENST00000520602 SEMG2Q02383 582 aa10.18□□□□□ -0.78
MCF2-209ENST00000520602 BCL2L1Q07817 233 aa10.18□□□□□ -0.78
MCF2-209ENST00000520602 GK5Q6ZS86 529 aa10.18□□□□□ -0.78
MCF2-209ENST00000520602 ABCG8Q9H221 673 aa10.18□□□□□ -0.78
MCF2-209ENST00000520602 ZNF212Q9UDV6 495 aa10.18□□□□□ -0.78
MCF2-209ENST00000520602 DTNAQ9Y4J8 743 aa10.18□□□□□ -0.78
MCF2-209ENST00000520602 ACTL7AQ9Y615 435 aa10.18□□□□□ -0.78
MCF2-209ENST00000520602 TRAFD1O14545 582 aaPredicted RBP10.18□□□□□ -0.78
MCF2-209ENST00000520602 SLC7A4O43246 635 aa10.18□□□□□ -0.78
MCF2-209ENST00000520602 SNAP91O60641 907 aa10.18□□□□□ -0.78
MCF2-209ENST00000520602 TBX10O75333 385 aa10.18□□□□□ -0.78
MCF2-209ENST00000520602 ITGALP20701 1170 aa10.18□□□□□ -0.78
MCF2-209ENST00000520602 MAPKAPK2P49137 400 aa10.18□□□□□ -0.78
MCF2-209ENST00000520602 KCNK10P57789 538 aa10.18□□□□□ -0.78
MCF2-209ENST00000520602 IL2P60568 153 aa10.18□□□□□ -0.78
MCF2-209ENST00000520602 SMARCB1Q12824 385 aa10.18□□□□□ -0.78
MCF2-209ENST00000520602 MSLNQ13421 630 aaPredicted RBP10.18□□□□□ -0.78
MCF2-209ENST00000520602 PPM1LQ5SGD2 360 aa10.18□□□□□ -0.78
MCF2-209ENST00000520602 NAPRTQ6XQN6 538 aa10.18□□□□□ -0.78
MCF2-209ENST00000520602 RTN4RL1Q86UN2 441 aaPredicted RBP10.18□□□□□ -0.78
MCF2-209ENST00000520602 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.18□□□□□ -0.78
MCF2-209ENST00000520602 GDPD5Q8WTR4 605 aa10.18□□□□□ -0.78
MCF2-209ENST00000520602 UTP4Q969X6 686 aaKnown RBP10.18□□□□□ -0.78
MCF2-209ENST00000520602 ZNF184Q99676 751 aaPredicted RBP10.18□□□□□ -0.78
MCF2-209ENST00000520602 DRC3Q9H069 523 aa10.18□□□□□ -0.78
MCF2-209ENST00000520602 MAGEH1Q9H213 219 aa10.18□□□□□ -0.78
MCF2-209ENST00000520602 WWOXQ9NZC7 414 aa10.18□□□□□ -0.78
MCF2-209ENST00000520602 EMCNQ9ULC0 261 aa10.18□□□□□ -0.78
MCF2-209ENST00000520602 CAPN15O75808 1086 aa10.18□□□□□ -0.78
MCF2-209ENST00000520602 RPL34P49207 117 aaKnown RBP10.18□□□□□ -0.78
MCF2-209ENST00000520602 MRPS35P82673 323 aaKnown RBP10.18□□□□□ -0.78
MCF2-209ENST00000520602 ZNF33AQ06730 810 aa10.18□□□□□ -0.78
MCF2-209ENST00000520602 DSC3Q14574 896 aa10.18□□□□□ -0.78
MCF2-209ENST00000520602 CYTH1Q15438 398 aa10.18□□□□□ -0.78
MCF2-209ENST00000520602 ATXN7L2Q5T6C5 722 aaPredicted RBP10.18□□□□□ -0.78
MCF2-209ENST00000520602 TMCO2Q7Z6W1 182 aaPredicted RBP10.18□□□□□ -0.78
MCF2-209ENST00000520602 DCUN1D1Q96GG9 259 aa10.18□□□□□ -0.78
MCF2-209ENST00000520602 GPR21Q99679 349 aa10.18□□□□□ -0.78
MCF2-209ENST00000520602 CORO1BQ9BR76 489 aa10.18□□□□□ -0.78
MCF2-209ENST00000520602 HGH1Q9BTY7 390 aa10.18□□□□□ -0.78
MCF2-209ENST00000520602 MKS1Q9NXB0 559 aa10.18□□□□□ -0.78
MCF2-209ENST00000520602 ZMYM5Q9UJ78 669 aa10.18□□□□□ -0.78
MCF2-209ENST00000520602 FCF1Q9Y324 198 aaKnown RBP10.18□□□□□ -0.78
MCF2-209ENST00000520602 SNX13Q9Y5W8 968 aa10.18□□□□□ -0.78
MCF2-209ENST00000520602 UBXN8O00124 270 aa10.17□□□□□ -0.78
MCF2-209ENST00000520602 INSIG1O15503 277 aa10.17□□□□□ -0.78
MCF2-209ENST00000520602 SH3BP5O60239 455 aa10.17□□□□□ -0.78
MCF2-209ENST00000520602 MAGEC1O60732 1142 aa10.17□□□□□ -0.78
MCF2-209ENST00000520602 SIX3O95343 332 aaPredicted RBP10.17□□□□□ -0.78
MCF2-209ENST00000520602 LINC00032P0C843 101 aa10.17□□□□□ -0.78
MCF2-209ENST00000520602 SLC35E2BP0CK96 405 aa10.17□□□□□ -0.78
MCF2-209ENST00000520602 SEMA3BQ13214 749 aa10.17□□□□□ -0.78
MCF2-209ENST00000520602 MTA1Q13330 715 aa10.17□□□□□ -0.78
MCF2-209ENST00000520602 ARHGEF7Q14155 803 aa10.17□□□□□ -0.78
MCF2-209ENST00000520602 ZNF789Q5FWF6 425 aa10.17□□□□□ -0.78
MCF2-209ENST00000520602 UGT3A1Q6NUS8 523 aa10.17□□□□□ -0.78
MCF2-209ENST00000520602 FAM151BQ6UXP7 276 aa10.17□□□□□ -0.78
MCF2-209ENST00000520602 FRMD7Q6ZUT3 714 aa10.17□□□□□ -0.78
MCF2-209ENST00000520602 ITIH5Q86UX2 942 aa10.17□□□□□ -0.78
MCF2-209ENST00000520602 GPSM1Q86YR5 675 aa10.17□□□□□ -0.78
MCF2-209ENST00000520602 UMODL1-AS1Q8N2C9 162 aa10.17□□□□□ -0.78
MCF2-209ENST00000520602 BHLHE22Q8NFJ8 381 aaPredicted RBP10.17□□□□□ -0.78
MCF2-209ENST00000520602 BRSK1Q8TDC3 778 aa10.17□□□□□ -0.78
MCF2-209ENST00000520602 JADE3Q92613 823 aa10.17□□□□□ -0.78
MCF2-209ENST00000520602 CNDP1Q96KN2 507 aa10.17□□□□□ -0.78
MCF2-209ENST00000520602 C1orf74Q96LT6 269 aa10.17□□□□□ -0.78
MCF2-209ENST00000520602 ACOX2Q99424 681 aa10.17□□□□□ -0.78
MCF2-209ENST00000520602 C2orf49Q9BVC5 232 aaPredicted RBP10.17□□□□□ -0.78
MCF2-209ENST00000520602 UNC93B1Q9H1C4 597 aa10.17□□□□□ -0.78
MCF2-209ENST00000520602 ASB8Q9H765 288 aa10.17□□□□□ -0.78
MCF2-209ENST00000520602 COPS7BQ9H9Q2 264 aaPredicted RBP10.17□□□□□ -0.78
MCF2-209ENST00000520602 TMEM248Q9NWD8 314 aa10.17□□□□□ -0.78
MCF2-209ENST00000520602 CDH22Q9UJ99 828 aa10.17□□□□□ -0.78
MCF2-209ENST00000520602 RPL26L1Q9UNX3 145 aaKnown RBP10.17□□□□□ -0.78
MCF2-209ENST00000520602 LRCH1Q9Y2L9 728 aa10.17□□□□□ -0.78
MCF2-209ENST00000520602 C1orf232A0A0U1RR37 186 aa10.17□□□□□ -0.78
MCF2-209ENST00000520602 GNGT2O14610 69 aa10.17□□□□□ -0.78
MCF2-209ENST00000520602 ARSDP51689 593 aa10.17□□□□□ -0.78
MCF2-209ENST00000520602 CDH4P55283 916 aa10.17□□□□□ -0.78
MCF2-209ENST00000520602 MGAT3Q09327 533 aa10.17□□□□□ -0.78
MCF2-209ENST00000520602 AFTPHQ6ULP2 937 aa10.17□□□□□ -0.78
MCF2-209ENST00000520602 OTOP2Q7RTS6 562 aa10.17□□□□□ -0.78
MCF2-209ENST00000520602 DDX53Q86TM3 631 aaKnown RBP10.17□□□□□ -0.78
MCF2-209ENST00000520602 DSELQ8IZU8 1212 aa10.17□□□□□ -0.78
MCF2-209ENST00000520602 FAM156AQ8NDB6 213 aa10.17□□□□□ -0.78
MCF2-209ENST00000520602 RP9Q8TA86 221 aaKnown RBP10.17□□□□□ -0.78
MCF2-209ENST00000520602 PTCD3Q96EY7 689 aaKnown RBP10.17□□□□□ -0.78
MCF2-209ENST00000520602 TRIM54Q9BYV2 358 aa10.17□□□□□ -0.78
MCF2-209ENST00000520602 EVLQ9UI08 416 aaPredicted RBP10.17□□□□□ -0.78
MCF2-209ENST00000520602 FKBPLQ9UIM3 349 aa10.17□□□□□ -0.78
MCF2-209ENST00000520602 MCM8Q9UJA3 840 aa10.17□□□□□ -0.78
MCF2-209ENST00000520602 TIMM22Q9Y584 194 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms