RNA–Protein interactions for RNA: ENST00000520399.1

ERGIC1-208, Transcript of endoplasmic reticulum-golgi intermediate compartment 1, humanhuman

TSL 1 (best)

Gene ERGIC1, Length 5,687 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC1-208ENST00000520399 SP140LQ9H930 580 aa12.15□□□□□ -0.46
ERGIC1-208ENST00000520399 MORF4L1Q9UBU8 362 aa12.15□□□□□ -0.46
ERGIC1-208ENST00000520399 NCKAP1Q9Y2A7 1128 aa12.15□□□□□ -0.46
ERGIC1-208ENST00000520399 SLC15A5A6NIM6 579 aa12.15□□□□□ -0.47
ERGIC1-208ENST00000520399 TRIM3O75382 744 aaPredicted RBP12.15□□□□□ -0.47
ERGIC1-208ENST00000520399 NTSP30990 170 aa12.15□□□□□ -0.47
ERGIC1-208ENST00000520399 RPL9P32969 192 aaKnown RBP12.15□□□□□ -0.47
ERGIC1-208ENST00000520399 FMO1Q01740 532 aa12.15□□□□□ -0.47
ERGIC1-208ENST00000520399 ARMC12Q5T9G4 340 aa12.15□□□□□ -0.47
ERGIC1-208ENST00000520399 BROXQ5VW32 411 aa12.15□□□□□ -0.47
ERGIC1-208ENST00000520399 SYCE2Q6PIF2 218 aa12.15□□□□□ -0.47
ERGIC1-208ENST00000520399 CCDC115Q96NT0 180 aa12.15□□□□□ -0.47
ERGIC1-208ENST00000520399 PANX3Q96QZ0 392 aa12.15□□□□□ -0.47
ERGIC1-208ENST00000520399 GAD1Q99259 594 aa12.15□□□□□ -0.47
ERGIC1-208ENST00000520399 EHD1Q9H4M9 534 aa12.15□□□□□ -0.47
ERGIC1-208ENST00000520399 INTS7Q9NVH2 962 aaKnown RBP12.15□□□□□ -0.47
ERGIC1-208ENST00000520399 ABCG2Q9UNQ0 655 aa12.15□□□□□ -0.47
ERGIC1-208ENST00000520399 ILVBLA1L0T0 632 aa12.14□□□□□ -0.47
ERGIC1-208ENST00000520399 BTN3A1O00481 513 aa12.14□□□□□ -0.47
ERGIC1-208ENST00000520399 USP12O75317 370 aa12.14□□□□□ -0.47
ERGIC1-208ENST00000520399 CRYZL1O95825 349 aa12.14□□□□□ -0.47
ERGIC1-208ENST00000520399 MSLNQ13421 630 aaPredicted RBP12.14□□□□□ -0.47
ERGIC1-208ENST00000520399 ERI1Q8IV48 349 aaKnown RBP12.14□□□□□ -0.47
ERGIC1-208ENST00000520399 ZNF398Q8TD17 642 aa12.14□□□□□ -0.47
ERGIC1-208ENST00000520399 ART4Q93070 314 aa12.14□□□□□ -0.47
ERGIC1-208ENST00000520399 LENG9Q96B70 501 aa12.14□□□□□ -0.47
ERGIC1-208ENST00000520399 PURBQ96QR8 312 aaKnown RBP12.14□□□□□ -0.47
ERGIC1-208ENST00000520399 CORO1BQ9BR76 489 aa12.14□□□□□ -0.47
ERGIC1-208ENST00000520399 SMPD4Q9NXE4 827 aa12.14□□□□□ -0.47
ERGIC1-208ENST00000520399 ADAM28Q9UKQ2 775 aa12.14□□□□□ -0.47
ERGIC1-208ENST00000520399 PMF1-BGLAPU3KQ54 211 aa12.14□□□□□ -0.47
ERGIC1-208ENST00000520399 FAM92AA1XBS5 289 aa12.14□□□□□ -0.47
ERGIC1-208ENST00000520399 MAGEB3O15480 346 aa12.14□□□□□ -0.47
ERGIC1-208ENST00000520399 RGS14O43566 566 aa12.14□□□□□ -0.47
ERGIC1-208ENST00000520399 TSPAN1O60635 241 aa12.14□□□□□ -0.47
ERGIC1-208ENST00000520399 XYLBO75191 536 aa12.14□□□□□ -0.47
ERGIC1-208ENST00000520399 MTA2O94776 668 aa12.14□□□□□ -0.47
ERGIC1-208ENST00000520399 ITGAVP06756 1048 aa12.14□□□□□ -0.47
ERGIC1-208ENST00000520399 CES1P23141 567 aa12.14□□□□□ -0.47
ERGIC1-208ENST00000520399 STK40Q8N2I9 435 aa12.14□□□□□ -0.47
ERGIC1-208ENST00000520399 BAP1Q92560 729 aa12.14□□□□□ -0.47
ERGIC1-208ENST00000520399 MND1Q9BWT6 205 aa12.14□□□□□ -0.47
ERGIC1-208ENST00000520399 ZNF717Q9BY31 904 aaPredicted RBP12.14□□□□□ -0.47
ERGIC1-208ENST00000520399 KCNN2Q9H2S1 579 aa12.14□□□□□ -0.47
ERGIC1-208ENST00000520399 KCNK4Q9NYG8 393 aa12.14□□□□□ -0.47
ERGIC1-208ENST00000520399 PCDHAC2Q9Y5I4 1007 aa12.14□□□□□ -0.47
ERGIC1-208ENST00000520399 SEC22BO75396 215 aa12.14□□□□□ -0.47
ERGIC1-208ENST00000520399 SLC25A12O75746 678 aa12.14□□□□□ -0.47
ERGIC1-208ENST00000520399 CBX6O95503 412 aa12.14□□□□□ -0.47
ERGIC1-208ENST00000520399 RB1P06400 928 aa12.14□□□□□ -0.47
ERGIC1-208ENST00000520399 NFKB1P19838 968 aa12.14□□□□□ -0.47
ERGIC1-208ENST00000520399 CLK2P49760 499 aaKnown RBP12.14□□□□□ -0.47
ERGIC1-208ENST00000520399 FOXR2Q6PJQ5 311 aa12.14□□□□□ -0.47
ERGIC1-208ENST00000520399 POLNQ7Z5Q5 900 aa12.14□□□□□ -0.47
ERGIC1-208ENST00000520399 OR8H1Q8NGG4 311 aa12.14□□□□□ -0.47
ERGIC1-208ENST00000520399 SEMA4DQ92854 862 aa12.14□□□□□ -0.47
ERGIC1-208ENST00000520399 MYLPFQ96A32 169 aa12.14□□□□□ -0.47
ERGIC1-208ENST00000520399 ZC3H10Q96K80 434 aaKnown RBP12.14□□□□□ -0.47
ERGIC1-208ENST00000520399 CDT1Q9H211 546 aa12.14□□□□□ -0.47
ERGIC1-208ENST00000520399 HMX1Q9NP08 348 aaPredicted RBP12.14□□□□□ -0.47
ERGIC1-208ENST00000520399 OR12D3Q9UGF7 316 aa12.14□□□□□ -0.47
ERGIC1-208ENST00000520399 A0A0U1RQJ8 604 aa12.14□□□□□ -0.47
ERGIC1-208ENST00000520399 GSAPA4D1B5 854 aa12.14□□□□□ -0.47
ERGIC1-208ENST00000520399 CLDN25C9JDP6 229 aa12.14□□□□□ -0.47
ERGIC1-208ENST00000520399 PDPK1O15530 556 aa12.14□□□□□ -0.47
ERGIC1-208ENST00000520399 SPATA31C1P0DKV0 1188 aa12.14□□□□□ -0.47
ERGIC1-208ENST00000520399 MYL9P24844 172 aa12.14□□□□□ -0.47
ERGIC1-208ENST00000520399 STXBP1P61764 594 aaKnown RBP12.14□□□□□ -0.47
ERGIC1-208ENST00000520399 ZNF423Q2M1K9 1284 aa12.14□□□□□ -0.47
ERGIC1-208ENST00000520399 HYIQ5T013 277 aa12.14□□□□□ -0.47
ERGIC1-208ENST00000520399 RAB43Q86YS6 212 aa12.14□□□□□ -0.47
ERGIC1-208ENST00000520399 COLGALT2Q8IYK4 626 aa12.14□□□□□ -0.47
ERGIC1-208ENST00000520399 SLC9A6Q92581 669 aa12.14□□□□□ -0.47
ERGIC1-208ENST00000520399 ZNF354BQ96LW1 612 aa12.14□□□□□ -0.47
ERGIC1-208ENST00000520399 CARNS1A5YM72 827 aa12.13□□□□□ -0.47
ERGIC1-208ENST00000520399 MT-CO1P00395 513 aa12.13□□□□□ -0.47
ERGIC1-208ENST00000520399 PIK3CGP48736 1102 aa12.13□□□□□ -0.47
ERGIC1-208ENST00000520399 HSF2Q03933 536 aa12.13□□□□□ -0.47
ERGIC1-208ENST00000520399 DLG1Q12959 904 aa12.13□□□□□ -0.47
ERGIC1-208ENST00000520399 BOP1Q14137 746 aaKnown RBP12.13□□□□□ -0.47
ERGIC1-208ENST00000520399 KIAA0319LQ8IZA0 1049 aa12.13□□□□□ -0.47
ERGIC1-208ENST00000520399 TESCQ96BS2 214 aa12.13□□□□□ -0.47
ERGIC1-208ENST00000520399 C9orf16Q9BUW7 83 aa12.13□□□□□ -0.47
ERGIC1-208ENST00000520399 OSBPL11Q9BXB4 747 aa12.13□□□□□ -0.47
ERGIC1-208ENST00000520399 LRRC19Q9H756 370 aa12.13□□□□□ -0.47
ERGIC1-208ENST00000520399 SUCOQ9UBS9 1254 aaKnown RBP12.13□□□□□ -0.47
ERGIC1-208ENST00000520399 TMEM5Q9Y2B1 443 aa12.13□□□□□ -0.47
ERGIC1-208ENST00000520399 IRAK3Q9Y616 596 aa12.13□□□□□ -0.47
ERGIC1-208ENST00000520399 MRC1P22897 1456 aa12.13□□□□□ -0.47
ERGIC1-208ENST00000520399 MYO5BQ9ULV0 1848 aa12.13□□□□□ -0.47
ERGIC1-208ENST00000520399 MRASO14807 208 aa12.13□□□□□ -0.47
ERGIC1-208ENST00000520399 LDOC1O95751 146 aaPredicted RBP12.13□□□□□ -0.47
ERGIC1-208ENST00000520399 ABHD2P08910 425 aa12.13□□□□□ -0.47
ERGIC1-208ENST00000520399 RPL14P50914 215 aaKnown RBP12.13□□□□□ -0.47
ERGIC1-208ENST00000520399 PGDP52209 483 aa12.13□□□□□ -0.47
ERGIC1-208ENST00000520399 ZCCHC23Q6ZST2 131 aa12.13□□□□□ -0.47
ERGIC1-208ENST00000520399 USP45Q70EL2 814 aa12.13□□□□□ -0.47
ERGIC1-208ENST00000520399 CXXC5Q7LFL8 322 aaKnown RBP12.13□□□□□ -0.47
ERGIC1-208ENST00000520399 SLC41A1Q8IVJ1 513 aa12.13□□□□□ -0.47
ERGIC1-208ENST00000520399 DHRSXQ8N5I4 330 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 136.5 ms