RNA–Protein interactions for RNA: ENST00000520170.1

HDAC2-207, Transcript of histone deacetylase 2, humanhuman

TSL 2

Gene HDAC2, Length 690 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-207ENST00000520170 FAM117AQ9C073 453 aa20.1■□□□□ 0.81
HDAC2-207ENST00000520170 DHX35Q9H5Z1 703 aaKnown RBP20.1■□□□□ 0.81
HDAC2-207ENST00000520170 SEPT10Q9P0V9 454 aa20.1■□□□□ 0.81
HDAC2-207ENST00000520170 AP4E1Q9UPM8 1137 aa20.1■□□□□ 0.81
HDAC2-207ENST00000520170 TEX33O43247 280 aa20.09■□□□□ 0.81
HDAC2-207ENST00000520170 DAPK3O43293 454 aa20.09■□□□□ 0.81
HDAC2-207ENST00000520170 PNLIPP16233 465 aa20.09■□□□□ 0.81
HDAC2-207ENST00000520170 HLTFQ14527 1009 aaKnown RBP eCLIP20.09■□□□□ 0.81
HDAC2-207ENST00000520170 ACOX1Q15067 660 aa20.09■□□□□ 0.81
HDAC2-207ENST00000520170 CA9Q16790 459 aa20.09■□□□□ 0.81
HDAC2-207ENST00000520170 MANEAQ5SRI9 462 aa20.09■□□□□ 0.81
HDAC2-207ENST00000520170 SPECC1LQ69YQ0 1117 aa20.09■□□□□ 0.81
HDAC2-207ENST00000520170 ACAD10Q6JQN1 1059 aa20.09■□□□□ 0.81
HDAC2-207ENST00000520170 TMPRSS9Q7Z410 1059 aa20.09■□□□□ 0.81
HDAC2-207ENST00000520170 VASH2Q86V25 355 aa20.09■□□□□ 0.81
HDAC2-207ENST00000520170 ZFAND4Q86XD8 727 aa20.09■□□□□ 0.81
HDAC2-207ENST00000520170 MCOLN2Q8IZK6 566 aa20.09■□□□□ 0.81
HDAC2-207ENST00000520170 USP7Q93009 1102 aa20.09■□□□□ 0.81
HDAC2-207ENST00000520170 TMEM159Q96B96 161 aa20.09■□□□□ 0.81
HDAC2-207ENST00000520170 CMKLR1Q99788 373 aa20.09■□□□□ 0.81
HDAC2-207ENST00000520170 SUDS3Q9H7L9 328 aaPredicted RBP20.09■□□□□ 0.81
HDAC2-207ENST00000520170 SP110Q9HB58 689 aa20.09■□□□□ 0.81
HDAC2-207ENST00000520170 HEMK1Q9Y5R4 338 aaPredicted RBP20.09■□□□□ 0.81
HDAC2-207ENST00000520170 DFFAO00273 331 aa20.08■□□□□ 0.81
HDAC2-207ENST00000520170 TNFRSF10CO14798 259 aa20.08■□□□□ 0.81
HDAC2-207ENST00000520170 WISP1O95388 367 aa20.08■□□□□ 0.81
HDAC2-207ENST00000520170 POLR2LP62875 67 aaKnown RBP20.08■□□□□ 0.81
HDAC2-207ENST00000520170 AFMIDQ63HM1 303 aa20.08■□□□□ 0.81
HDAC2-207ENST00000520170 PNCKQ6P2M8 343 aa20.08■□□□□ 0.81
HDAC2-207ENST00000520170 ARHGAP36Q6ZRI8 547 aa20.08■□□□□ 0.81
HDAC2-207ENST00000520170 DPPA4Q7L190 304 aa20.08■□□□□ 0.81
HDAC2-207ENST00000520170 PELI3Q8N2H9 469 aa20.08■□□□□ 0.81
HDAC2-207ENST00000520170 ECHDC3Q96DC8 303 aa20.08■□□□□ 0.81
HDAC2-207ENST00000520170 SEMA6CQ9H3T2 930 aa20.08■□□□□ 0.81
HDAC2-207ENST00000520170 WDR26Q9H7D7 661 aa20.08■□□□□ 0.81
HDAC2-207ENST00000520170 FOXJ2Q9P0K8 574 aa20.08■□□□□ 0.81
HDAC2-207ENST00000520170 PCSK1NQ9UHG2 260 aa20.08■□□□□ 0.81
HDAC2-207ENST00000520170 NUDT21O43809 227 aaKnown RBP20.07■□□□□ 0.8
HDAC2-207ENST00000520170 HOXC4P09017 264 aaPredicted RBP20.07■□□□□ 0.8
HDAC2-207ENST00000520170 GM2AP17900 193 aa20.07■□□□□ 0.8
HDAC2-207ENST00000520170 PSMA2P25787 234 aa20.07■□□□□ 0.8
HDAC2-207ENST00000520170 TRIM23P36406 574 aa20.07■□□□□ 0.8
HDAC2-207ENST00000520170 SCNN1BP51168 640 aa20.07■□□□□ 0.8
HDAC2-207ENST00000520170 UBXN1Q04323 297 aa20.07■□□□□ 0.8
HDAC2-207ENST00000520170 AMZ1Q400G9 498 aa20.07■□□□□ 0.8
HDAC2-207ENST00000520170 MAP9Q49MG5 647 aa20.07■□□□□ 0.8
HDAC2-207ENST00000520170 SLITRK4Q8IW52 837 aa20.07■□□□□ 0.8
HDAC2-207ENST00000520170 TRIM4Q9C037 500 aa20.07■□□□□ 0.8
HDAC2-207ENST00000520170 RDH14Q9HBH5 336 aa20.07■□□□□ 0.8
HDAC2-207ENST00000520170 PCDHB11Q9Y5F2 797 aa20.07■□□□□ 0.8
HDAC2-207ENST00000520170 SDK2Q58EX2 2172 aa20.07■□□□□ 0.8
HDAC2-207ENST00000520170 SPTA1P02549 2419 aa20.06■□□□□ 0.8
HDAC2-207ENST00000520170 PRSS38A1L453 326 aa20.06■□□□□ 0.8
HDAC2-207ENST00000520170 TTC24A2A3L6 582 aaPredicted RBP20.06■□□□□ 0.8
HDAC2-207ENST00000520170 LGALS16A8MUM7 142 aa20.06■□□□□ 0.8
HDAC2-207ENST00000520170 TMCO5BA8MYB1 307 aa20.06■□□□□ 0.8
HDAC2-207ENST00000520170 PDE2AO00408 941 aaPredicted RBP20.06■□□□□ 0.8
HDAC2-207ENST00000520170 B4GAT1O43505 415 aa20.06■□□□□ 0.8
HDAC2-207ENST00000520170 ITGB2P05107 769 aa20.06■□□□□ 0.8
HDAC2-207ENST00000520170 FAM87AP0C7U9 286 aa20.06■□□□□ 0.8
HDAC2-207ENST00000520170 ERCC2P18074 760 aa20.06■□□□□ 0.8
HDAC2-207ENST00000520170 MAZP56270 477 aaKnown RBP20.06■□□□□ 0.8
HDAC2-207ENST00000520170 OR1D5P58170 312 aa20.06■□□□□ 0.8
HDAC2-207ENST00000520170 B4GALNT1Q00973 533 aa20.06■□□□□ 0.8
HDAC2-207ENST00000520170 NSUN2Q08J23 767 aaKnown RBP eCLIP20.06■□□□□ 0.8
HDAC2-207ENST00000520170 ERMARDQ5T6L9 678 aa20.06■□□□□ 0.8
HDAC2-207ENST00000520170 PIM3Q86V86 326 aa20.06■□□□□ 0.8
HDAC2-207ENST00000520170 ARHGAP12Q8IWW6 846 aa20.06■□□□□ 0.8
HDAC2-207ENST00000520170 ZSCAN1Q8NBB4 408 aa20.06■□□□□ 0.8
HDAC2-207ENST00000520170 ANKRD20A12PQ8NF67 263 aa20.06■□□□□ 0.8
HDAC2-207ENST00000520170 KIAA1524Q8TCG1 905 aa20.06■□□□□ 0.8
HDAC2-207ENST00000520170 NSMCE3Q96MG7 304 aa20.06■□□□□ 0.8
HDAC2-207ENST00000520170 KCTD15Q96SI1 283 aaPredicted RBP20.06■□□□□ 0.8
HDAC2-207ENST00000520170 SNRNP25Q9BV90 132 aaKnown RBP20.06■□□□□ 0.8
HDAC2-207ENST00000520170 CARS2Q9HA77 564 aaKnown RBP20.06■□□□□ 0.8
HDAC2-207ENST00000520170 SPATS2LQ9NUQ6 558 aaKnown RBP20.06■□□□□ 0.8
HDAC2-207ENST00000520170 TAS2R14Q9NYV8 317 aa20.06■□□□□ 0.8
HDAC2-207ENST00000520170 PCDHGA4Q9Y5G9 962 aa20.06■□□□□ 0.8
HDAC2-207ENST00000520170 C9orf172C9J069 976 aa20.05■□□□□ 0.8
HDAC2-207ENST00000520170 TRAFD1O14545 582 aaPredicted RBP20.05■□□□□ 0.8
HDAC2-207ENST00000520170 ATMINO43313 823 aaPredicted RBP20.05■□□□□ 0.8
HDAC2-207ENST00000520170 ALDH4A1P30038 563 aa20.05■□□□□ 0.8
HDAC2-207ENST00000520170 NFKB2Q00653 900 aa20.05■□□□□ 0.8
HDAC2-207ENST00000520170 IL10RBQ08334 325 aa20.05■□□□□ 0.8
HDAC2-207ENST00000520170 MAMLD1Q13495 774 aa20.05■□□□□ 0.8
HDAC2-207ENST00000520170 RFTN1Q14699 578 aaPredicted RBP20.05■□□□□ 0.8
HDAC2-207ENST00000520170 C16orf72Q14CZ0 275 aa20.05■□□□□ 0.8
HDAC2-207ENST00000520170 TSR1Q2NL82 804 aaKnown RBP20.05■□□□□ 0.8
HDAC2-207ENST00000520170 PPP6R3Q5H9R7 873 aaPredicted RBP20.05■□□□□ 0.8
HDAC2-207ENST00000520170 DENND2CQ68D51 928 aa20.05■□□□□ 0.8
HDAC2-207ENST00000520170 XKR5Q6UX68 686 aa20.05■□□□□ 0.8
HDAC2-207ENST00000520170 RFX8Q6ZV50 586 aa20.05■□□□□ 0.8
HDAC2-207ENST00000520170 NPWQ8N729 165 aa20.05■□□□□ 0.8
HDAC2-207ENST00000520170 PEBP4Q96S96 227 aa20.05■□□□□ 0.8
HDAC2-207ENST00000520170 PARVAQ9NVD7 372 aa20.05■□□□□ 0.8
HDAC2-207ENST00000520170 AKAP7Q9P0M2 348 aaPredicted RBP20.05■□□□□ 0.8
HDAC2-207ENST00000520170 B4GALT6Q9UBX8 382 aa20.05■□□□□ 0.8
HDAC2-207ENST00000520170 LIMA1Q9UHB6 759 aaKnown RBP20.05■□□□□ 0.8
HDAC2-207ENST00000520170 ZFC3H1O60293 1989 aaKnown RBP20.04■□□□□ 0.8
HDAC2-207ENST00000520170 RHPN2P1A8MT19 583 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms