RNA–Protein interactions for RNA: ENST00000519553.1

PTPN12-213, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-213ENST00000519553 TDRD9Q8NDG6 1382 aaKnown RBP6.21□□□□□ -1.41
PTPN12-213ENST00000519553 A0A0U1RQJ8 604 aa6.21□□□□□ -1.42
PTPN12-213ENST00000519553 LACTBL1A8MY62 500 aa6.21□□□□□ -1.42
PTPN12-213ENST00000519553 ZIC3O60481 467 aa6.21□□□□□ -1.42
PTPN12-213ENST00000519553 USO1O60763 962 aaKnown RBP6.21□□□□□ -1.42
PTPN12-213ENST00000519553 KCNJ13O60928 360 aa6.21□□□□□ -1.42
PTPN12-213ENST00000519553 SERPINI2O75830 405 aa6.21□□□□□ -1.42
PTPN12-213ENST00000519553 SPARCP09486 303 aa6.21□□□□□ -1.42
PTPN12-213ENST00000519553 CAPN3P20807 821 aa6.21□□□□□ -1.42
PTPN12-213ENST00000519553 EIF2S3P41091 472 aaKnown RBP6.21□□□□□ -1.42
PTPN12-213ENST00000519553 CEBPZQ03701 1054 aaKnown RBP6.21□□□□□ -1.42
PTPN12-213ENST00000519553 KRT32Q14532 448 aa6.21□□□□□ -1.42
PTPN12-213ENST00000519553 PLCB4Q15147 1175 aa6.21□□□□□ -1.42
PTPN12-213ENST00000519553 SETMARQ53H47 684 aaPredicted RBP6.21□□□□□ -1.42
PTPN12-213ENST00000519553 PPP6R3Q5H9R7 873 aaPredicted RBP6.21□□□□□ -1.42
PTPN12-213ENST00000519553 EFHC1Q5JVL4 640 aa6.21□□□□□ -1.42
PTPN12-213ENST00000519553 GPATCH4Q5T3I0 446 aaKnown RBP6.21□□□□□ -1.42
PTPN12-213ENST00000519553 PLEKHA7Q6IQ23 1121 aa6.21□□□□□ -1.42
PTPN12-213ENST00000519553 B3GNT6Q6ZMB0 384 aa6.21□□□□□ -1.42
PTPN12-213ENST00000519553 CPLX4Q7Z7G2 160 aa6.21□□□□□ -1.42
PTPN12-213ENST00000519553 NEK9Q8TD19 979 aa6.21□□□□□ -1.42
PTPN12-213ENST00000519553 MMABQ96EY8 250 aaPredicted RBP6.21□□□□□ -1.42
PTPN12-213ENST00000519553 PPP1R13BQ96KQ4 1090 aa6.21□□□□□ -1.42
PTPN12-213ENST00000519553 MAP7D2Q96T17 732 aa6.21□□□□□ -1.42
PTPN12-213ENST00000519553 ZPBPQ9BS86 351 aa6.21□□□□□ -1.42
PTPN12-213ENST00000519553 SEZ6LQ9BYH1 1024 aa6.21□□□□□ -1.42
PTPN12-213ENST00000519553 SPRY4Q9C004 299 aa6.21□□□□□ -1.42
PTPN12-213ENST00000519553 KIF9Q9HAQ2 790 aa6.21□□□□□ -1.42
PTPN12-213ENST00000519553 PGPEP1LA6NFU8 196 aa6.2□□□□□ -1.42
PTPN12-213ENST00000519553 BAIAP3O94812 1187 aa6.2□□□□□ -1.42
PTPN12-213ENST00000519553 FTCDO95954 541 aa6.2□□□□□ -1.42
PTPN12-213ENST00000519553 PRSS2P07478 247 aa6.2□□□□□ -1.42
PTPN12-213ENST00000519553 HSPA1AP0DMV8 641 aaKnown RBP6.2□□□□□ -1.42
PTPN12-213ENST00000519553 HSPA1BP0DMV9 641 aaKnown RBP6.2□□□□□ -1.42
PTPN12-213ENST00000519553 CHMP24386 653 aa6.2□□□□□ -1.42
PTPN12-213ENST00000519553 PSMA4P25789 261 aaKnown RBP6.2□□□□□ -1.42
PTPN12-213ENST00000519553 TNFRSF8P28908 595 aa6.2□□□□□ -1.42
PTPN12-213ENST00000519553 PDLIM4P50479 330 aa6.2□□□□□ -1.42
PTPN12-213ENST00000519553 SORDQ00796 357 aa6.2□□□□□ -1.42
PTPN12-213ENST00000519553 OLIG2Q13516 323 aa6.2□□□□□ -1.42
PTPN12-213ENST00000519553 DHX34Q14147 1143 aaKnown RBP6.2□□□□□ -1.42
PTPN12-213ENST00000519553 ERV3-1Q14264 604 aa6.2□□□□□ -1.42
PTPN12-213ENST00000519553 NEDD9Q14511 834 aa6.2□□□□□ -1.42
PTPN12-213ENST00000519553 CCNG2Q16589 344 aa6.2□□□□□ -1.42
PTPN12-213ENST00000519553 SNX30Q5VWJ9 437 aa6.2□□□□□ -1.42
PTPN12-213ENST00000519553 HAUS3Q68CZ6 603 aa6.2□□□□□ -1.42
PTPN12-213ENST00000519553 PDXDC1Q6P996 788 aa6.2□□□□□ -1.42
PTPN12-213ENST00000519553 TSSK4Q6SA08 328 aa6.2□□□□□ -1.42
PTPN12-213ENST00000519553 CYP20A1Q6UW02 462 aa6.2□□□□□ -1.42
PTPN12-213ENST00000519553 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.2□□□□□ -1.42
PTPN12-213ENST00000519553 HAPLN4Q86UW8 402 aa6.2□□□□□ -1.42
PTPN12-213ENST00000519553 ZC3HC1Q86WB0 502 aaKnown RBP6.2□□□□□ -1.42
PTPN12-213ENST00000519553 SPATA2LQ8IUW3 424 aaPredicted RBP6.2□□□□□ -1.42
PTPN12-213ENST00000519553 FOXRED2Q8IWF2 684 aa6.2□□□□□ -1.42
PTPN12-213ENST00000519553 ADSSL1Q8N142 457 aa6.2□□□□□ -1.42
PTPN12-213ENST00000519553 ANKRD52Q8NB46 1076 aa6.2□□□□□ -1.42
PTPN12-213ENST00000519553 FAM149B1Q96BN6 582 aa6.2□□□□□ -1.42
PTPN12-213ENST00000519553 HIPK2Q9H2X6 1198 aa6.2□□□□□ -1.42
PTPN12-213ENST00000519553 SLC9A2Q9UBY0 812 aa6.2□□□□□ -1.42
PTPN12-213ENST00000519553 LIMA1Q9UHB6 759 aaKnown RBP6.2□□□□□ -1.42
PTPN12-213ENST00000519553 SLCO3A1Q9UIG8 710 aa6.2□□□□□ -1.42
PTPN12-213ENST00000519553 ADAM18Q9Y3Q7 739 aa6.2□□□□□ -1.42
PTPN12-213ENST00000519553 PSAT1Q9Y617 370 aa6.2□□□□□ -1.42
PTPN12-213ENST00000519553 KCNE2Q9Y6J6 123 aa6.2□□□□□ -1.42
PTPN12-213ENST00000519553 CEPT1Q9Y6K0 416 aa6.2□□□□□ -1.42
PTPN12-213ENST00000519553 A0A1W2PRG0 241 aa6.19□□□□□ -1.42
PTPN12-213ENST00000519553 SRRM3A6NNA2 597 aaPredicted RBP6.19□□□□□ -1.42
PTPN12-213ENST00000519553 NDUFS7O75251 213 aa6.19□□□□□ -1.42
PTPN12-213ENST00000519553 MAOAP21397 527 aa6.19□□□□□ -1.42
PTPN12-213ENST00000519553 SSTR2P30874 369 aa6.19□□□□□ -1.42
PTPN12-213ENST00000519553 GEMIN4P57678 1058 aaKnown RBP6.19□□□□□ -1.42
PTPN12-213ENST00000519553 ZXDBP98169 803 aa6.19□□□□□ -1.42
PTPN12-213ENST00000519553 TRAF2Q12933 501 aa6.19□□□□□ -1.42
PTPN12-213ENST00000519553 NAE1Q13564 534 aa6.19□□□□□ -1.42
PTPN12-213ENST00000519553 FRG1Q14331 258 aaKnown RBP6.19□□□□□ -1.42
PTPN12-213ENST00000519553 DRAP1Q14919 205 aaPredicted RBP6.19□□□□□ -1.42
PTPN12-213ENST00000519553 NFATC4Q14934 902 aa6.19□□□□□ -1.42
PTPN12-213ENST00000519553 EIF2S3LQ2VIR3 472 aaKnown RBP6.19□□□□□ -1.42
PTPN12-213ENST00000519553 USP41Q3LFD5 358 aa6.19□□□□□ -1.42
PTPN12-213ENST00000519553 DPCR1Q3MIW9 517 aa6.19□□□□□ -1.42
PTPN12-213ENST00000519553 C6orf141Q5SZD1 244 aa6.19□□□□□ -1.42
PTPN12-213ENST00000519553 NEK10Q6ZWH5 1172 aa6.19□□□□□ -1.42
PTPN12-213ENST00000519553 WDR63Q8IWG1 891 aa6.19□□□□□ -1.42
PTPN12-213ENST00000519553 TMED6Q8WW62 240 aa6.19□□□□□ -1.42
PTPN12-213ENST00000519553 WDFY2Q96P53 400 aa6.19□□□□□ -1.42
PTPN12-213ENST00000519553 MMTAG2Q9BU76 263 aaKnown RBP6.19□□□□□ -1.42
PTPN12-213ENST00000519553 IL25Q9H293 177 aa6.19□□□□□ -1.42
PTPN12-213ENST00000519553 MUC13Q9H3R2 512 aa6.19□□□□□ -1.42
PTPN12-213ENST00000519553 ZHX3Q9H4I2 956 aa6.19□□□□□ -1.42
PTPN12-213ENST00000519553 POLR1BQ9H9Y6 1135 aa6.19□□□□□ -1.42
PTPN12-213ENST00000519553 FBRSL1Q9HCM7 1045 aaKnown RBP6.19□□□□□ -1.42
PTPN12-213ENST00000519553 TINAGQ9UJW2 476 aa6.19□□□□□ -1.42
PTPN12-213ENST00000519553 EIF3CLB5ME19 914 aaKnown RBP6.18□□□□□ -1.42
PTPN12-213ENST00000519553 CCNDBP1O95273 360 aa6.18□□□□□ -1.42
PTPN12-213ENST00000519553 G6PDP11413 515 aa6.18□□□□□ -1.42
PTPN12-213ENST00000519553 LAMP2P13473 410 aa6.18□□□□□ -1.42
PTPN12-213ENST00000519553 CSTF3Q12996 717 aaKnown RBP6.18□□□□□ -1.42
PTPN12-213ENST00000519553 HLFQ16534 295 aa6.18□□□□□ -1.42
PTPN12-213ENST00000519553 PAPPA-AS1Q5QFB9 102 aa6.18□□□□□ -1.42
PTPN12-213ENST00000519553 CCDC30Q5VVM6 783 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms