RNA–Protein interactions for RNA: ENST00000519115.5

SDCBP-206, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-206ENST00000519115 ZNF806P0C7X5 589 aa7.65□□□□□ -1.18
SDCBP-206ENST00000519115 MYBL2P10244 700 aa7.65□□□□□ -1.18
SDCBP-206ENST00000519115 MAGEA3P43357 314 aa7.65□□□□□ -1.18
SDCBP-206ENST00000519115 RGRP47804 291 aa7.65□□□□□ -1.18
SDCBP-206ENST00000519115 SNRPD1P62314 119 aaKnown RBP7.65□□□□□ -1.18
SDCBP-206ENST00000519115 PPP2CBP62714 309 aa7.65□□□□□ -1.18
SDCBP-206ENST00000519115 PPP2CAP67775 309 aa7.65□□□□□ -1.18
SDCBP-206ENST00000519115 IRX4P78413 519 aa7.65□□□□□ -1.18
SDCBP-206ENST00000519115 DHX9Q08211 1270 aaKnown RBP7.65□□□□□ -1.18
SDCBP-206ENST00000519115 AP1B1Q10567 949 aa7.65□□□□□ -1.18
SDCBP-206ENST00000519115 SFSWAPQ12872 951 aaKnown RBP7.65□□□□□ -1.18
SDCBP-206ENST00000519115 PRPSAP1Q14558 356 aa7.65□□□□□ -1.18
SDCBP-206ENST00000519115 LLGL1Q15334 1064 aa7.65□□□□□ -1.18
SDCBP-206ENST00000519115 CYTH1Q15438 398 aa7.65□□□□□ -1.18
SDCBP-206ENST00000519115 TUBB8Q3ZCM7 444 aa7.65□□□□□ -1.18
SDCBP-206ENST00000519115 TRIM61Q5EBN2 209 aa7.65□□□□□ -1.18
SDCBP-206ENST00000519115 LRRC73Q5JTD7 316 aa7.65□□□□□ -1.18
SDCBP-206ENST00000519115 WDR45BQ5MNZ6 344 aa7.65□□□□□ -1.18
SDCBP-206ENST00000519115 SYCP2LQ5T4T6 812 aa7.65□□□□□ -1.18
SDCBP-206ENST00000519115 PIP5KL1Q5T9C9 394 aa7.65□□□□□ -1.18
SDCBP-206ENST00000519115 IZUMO3Q5VZ72 239 aa7.65□□□□□ -1.18
SDCBP-206ENST00000519115 LRRC8BQ6P9F7 803 aa7.65□□□□□ -1.18
SDCBP-206ENST00000519115 LAYNQ6UX15 382 aa7.65□□□□□ -1.18
SDCBP-206ENST00000519115 NPNTQ6UXI9 565 aa7.65□□□□□ -1.18
SDCBP-206ENST00000519115 PLPP6Q8IY26 295 aa7.65□□□□□ -1.18
SDCBP-206ENST00000519115 BBS5Q8N3I7 341 aa7.65□□□□□ -1.18
SDCBP-206ENST00000519115 ATPAF2Q8N5M1 289 aa7.65□□□□□ -1.18
SDCBP-206ENST00000519115 GOLGA6L1Q8N7Z2 621 aa7.65□□□□□ -1.18
SDCBP-206ENST00000519115 CCNYQ8ND76 341 aa7.65□□□□□ -1.18
SDCBP-206ENST00000519115 TMIEQ8NEW7 156 aa7.65□□□□□ -1.18
SDCBP-206ENST00000519115 CADM4Q8NFZ8 388 aa7.65□□□□□ -1.18
SDCBP-206ENST00000519115 OR2AP1Q8NGE2 309 aa7.65□□□□□ -1.18
SDCBP-206ENST00000519115 OR2T34Q8NGX1 318 aa7.65□□□□□ -1.18
SDCBP-206ENST00000519115 LRRN4Q8WUT4 740 aa7.65□□□□□ -1.18
SDCBP-206ENST00000519115 PTCD2Q8WV60 388 aaKnown RBP7.65□□□□□ -1.18
SDCBP-206ENST00000519115 CPT1BQ92523 772 aa7.65□□□□□ -1.18
SDCBP-206ENST00000519115 FOXJ1Q92949 421 aa7.65□□□□□ -1.18
SDCBP-206ENST00000519115 ISG20Q96AZ6 181 aaKnown RBP7.65□□□□□ -1.18
SDCBP-206ENST00000519115 BIRC7Q96CA5 298 aa7.65□□□□□ -1.18
SDCBP-206ENST00000519115 GDAP1L1Q96MZ0 367 aa7.65□□□□□ -1.18
SDCBP-206ENST00000519115 FCRL5Q96RD9 977 aa7.65□□□□□ -1.18
SDCBP-206ENST00000519115 LGMNQ99538 433 aa7.65□□□□□ -1.18
SDCBP-206ENST00000519115 CCDC77Q9BR77 488 aa7.65□□□□□ -1.18
SDCBP-206ENST00000519115 TRIM51Q9BSJ1 452 aa7.65□□□□□ -1.18
SDCBP-206ENST00000519115 SGK2Q9HBY8 427 aa7.65□□□□□ -1.18
SDCBP-206ENST00000519115 ARNT2Q9HBZ2 717 aa7.65□□□□□ -1.18
SDCBP-206ENST00000519115 DYRK4Q9NR20 520 aa7.65□□□□□ -1.18
SDCBP-206ENST00000519115 RAB6BQ9NRW1 208 aa7.65□□□□□ -1.18
SDCBP-206ENST00000519115 EVLQ9UI08 416 aaPredicted RBP7.65□□□□□ -1.18
SDCBP-206ENST00000519115 IPO11Q9UI26 975 aaKnown RBP7.65□□□□□ -1.18
SDCBP-206ENST00000519115 ATP8A1Q9Y2Q0 1164 aa7.65□□□□□ -1.18
SDCBP-206ENST00000519115 ZBTB32Q9Y2Y4 487 aaPredicted RBP7.65□□□□□ -1.18
SDCBP-206ENST00000519115 TBC1D3DA0A087WVF3 549 aa7.64□□□□□ -1.19
SDCBP-206ENST00000519115 TBC1D3IA0A087WXS9 549 aa7.64□□□□□ -1.19
SDCBP-206ENST00000519115 TBC1D3EA0A087X179 549 aa7.64□□□□□ -1.19
SDCBP-206ENST00000519115 TBC1D3KA0A087X1G2 549 aa7.64□□□□□ -1.19
SDCBP-206ENST00000519115 LOC105378220A0A1B0GUY1 285 aaPredicted RBP7.64□□□□□ -1.19
SDCBP-206ENST00000519115 ESYT3A0FGR9 886 aa7.64□□□□□ -1.19
SDCBP-206ENST00000519115 TBC1D3FA6NER0 549 aaPredicted RBP7.64□□□□□ -1.19
SDCBP-206ENST00000519115 LRRC72A6NJI9 287 aa7.64□□□□□ -1.19
SDCBP-206ENST00000519115 TBC1D3LB9A6J9 549 aa7.64□□□□□ -1.19
SDCBP-206ENST00000519115 KHNYNO15037 678 aaKnown RBP7.64□□□□□ -1.19
SDCBP-206ENST00000519115 MUSKO15146 869 aa7.64□□□□□ -1.19
SDCBP-206ENST00000519115 PLRG1O43660 514 aaKnown RBP7.64□□□□□ -1.19
SDCBP-206ENST00000519115 GJB3O75712 270 aa7.64□□□□□ -1.19
SDCBP-206ENST00000519115 PIGNO95427 931 aa7.64□□□□□ -1.19
SDCBP-206ENST00000519115 IGHV4-34P06331 123 aa7.64□□□□□ -1.19
SDCBP-206ENST00000519115 TBC1D3HP0C7X1 549 aa7.64□□□□□ -1.19
SDCBP-206ENST00000519115 ITGB7P26010 798 aa7.64□□□□□ -1.19
SDCBP-206ENST00000519115 PTPN3P26045 913 aa7.64□□□□□ -1.19
SDCBP-206ENST00000519115 MAT2AP31153 395 aaKnown RBP7.64□□□□□ -1.19
SDCBP-206ENST00000519115 MMP13P45452 471 aa7.64□□□□□ -1.19
SDCBP-206ENST00000519115 CSNK1DP48730 415 aa7.64□□□□□ -1.19
SDCBP-206ENST00000519115 NPY2RP49146 381 aa7.64□□□□□ -1.19
SDCBP-206ENST00000519115 PMS2P54278 862 aa7.64□□□□□ -1.19
SDCBP-206ENST00000519115 GDF10P55107 478 aa7.64□□□□□ -1.19
SDCBP-206ENST00000519115 TAS2R38P59533 333 aa7.64□□□□□ -1.19
SDCBP-206ENST00000519115 SLC10A7Q0GE19 358 aa7.64□□□□□ -1.19
SDCBP-206ENST00000519115 MPP3Q13368 585 aa7.64□□□□□ -1.19
SDCBP-206ENST00000519115 LAMB3Q13751 1172 aa7.64□□□□□ -1.19
SDCBP-206ENST00000519115 STAT4Q14765 748 aa7.64□□□□□ -1.19
SDCBP-206ENST00000519115 HIF1AQ16665 826 aa7.64□□□□□ -1.19
SDCBP-206ENST00000519115 DUOXA1Q1HG43 343 aa7.64□□□□□ -1.19
SDCBP-206ENST00000519115 MYLK3Q32MK0 819 aa7.64□□□□□ -1.19
SDCBP-206ENST00000519115 DNAJC21Q5F1R6 531 aaKnown RBP7.64□□□□□ -1.19
SDCBP-206ENST00000519115 MARC1Q5VT66 337 aa7.64□□□□□ -1.19
SDCBP-206ENST00000519115 PEAR1Q5VY43 1037 aaPredicted RBP7.64□□□□□ -1.19
SDCBP-206ENST00000519115 KIAA0895LQ68EN5 471 aa7.64□□□□□ -1.19
SDCBP-206ENST00000519115 TBC1D3GQ6DHY5 549 aa7.64□□□□□ -1.19
SDCBP-206ENST00000519115 TBC1D3CQ6IPX1 549 aa7.64□□□□□ -1.19
SDCBP-206ENST00000519115 ERN2Q76MJ5 926 aaKnown RBP7.64□□□□□ -1.19
SDCBP-206ENST00000519115 PARS2Q7L3T8 475 aaKnown RBP7.64□□□□□ -1.19
SDCBP-206ENST00000519115 PID1Q7Z2X4 250 aa7.64□□□□□ -1.19
SDCBP-206ENST00000519115 TBC1D3Q8IZP1 549 aaPredicted RBP7.64□□□□□ -1.19
SDCBP-206ENST00000519115 ZNF567Q8N184 647 aa7.64□□□□□ -1.19
SDCBP-206ENST00000519115 TSEN2Q8NCE0 465 aaKnown RBP7.64□□□□□ -1.19
SDCBP-206ENST00000519115 OR2I1PQ8NGU4 316 aa7.64□□□□□ -1.19
SDCBP-206ENST00000519115 DNASE2BQ8WZ79 361 aa7.64□□□□□ -1.19
SDCBP-206ENST00000519115 PEX13Q92968 403 aa7.64□□□□□ -1.19
SDCBP-206ENST00000519115 TADA1Q96BN2 335 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms