RNA–Protein interactions for RNA: ENST00000517691.1

SKP1-204, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 2,033 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-204ENST00000517691 DAG1Q14118 895 aa2.83□□□□□ -1.96
SKP1-204ENST00000517691 NR1I3Q14994 352 aa2.83□□□□□ -1.96
SKP1-204ENST00000517691 STILQ15468 1287 aa2.83□□□□□ -1.96
SKP1-204ENST00000517691 C3orf36Q3SXR2 165 aa2.83□□□□□ -1.96
SKP1-204ENST00000517691 KRTCAP3Q53RY4 240 aa2.83□□□□□ -1.96
SKP1-204ENST00000517691 FAM78AQ5JUQ0 283 aa2.83□□□□□ -1.96
SKP1-204ENST00000517691 SNX30Q5VWJ9 437 aa2.83□□□□□ -1.96
SKP1-204ENST00000517691 RNF43Q68DV7 783 aa2.83□□□□□ -1.96
SKP1-204ENST00000517691 ARHGAP17Q68EM7 881 aa2.83□□□□□ -1.96
SKP1-204ENST00000517691 GPR139Q6DWJ6 353 aa2.83□□□□□ -1.96
SKP1-204ENST00000517691 TANGO2Q6ICL3 276 aa2.83□□□□□ -1.96
SKP1-204ENST00000517691 RAB12Q6IQ22 244 aa2.83□□□□□ -1.96
SKP1-204ENST00000517691 ACAD10Q6JQN1 1059 aa2.83□□□□□ -1.96
SKP1-204ENST00000517691 DENND1BQ6P3S1 775 aa2.83□□□□□ -1.96
SKP1-204ENST00000517691 CRTC1Q6UUV9 634 aa2.83□□□□□ -1.96
SKP1-204ENST00000517691 LCLAT1Q6UWP7 414 aa2.83□□□□□ -1.96
SKP1-204ENST00000517691 RAPH1Q70E73 1250 aa2.83□□□□□ -1.96
SKP1-204ENST00000517691 MTSS1LQ765P7 747 aa2.83□□□□□ -1.96
SKP1-204ENST00000517691 GPRIN1Q7Z2K8 1008 aa2.83□□□□□ -1.96
SKP1-204ENST00000517691 GALNT7Q86SF2 657 aa2.83□□□□□ -1.96
SKP1-204ENST00000517691 SLC47A2Q86VL8 602 aa2.83□□□□□ -1.96
SKP1-204ENST00000517691 MON1AQ86VX9 555 aa2.83□□□□□ -1.96
SKP1-204ENST00000517691 TMC8Q8IU68 726 aa2.83□□□□□ -1.96
SKP1-204ENST00000517691 ARID3BQ8IVW6 561 aaPredicted RBP2.83□□□□□ -1.96
SKP1-204ENST00000517691 FAM71AQ8IYT1 594 aa2.83□□□□□ -1.96
SKP1-204ENST00000517691 ZDHHC14Q8IZN3 488 aa2.83□□□□□ -1.96
SKP1-204ENST00000517691 SIX6OS1Q8N1H7 587 aa2.83□□□□□ -1.96
SKP1-204ENST00000517691 SLC44A3Q8N4M1 653 aa2.83□□□□□ -1.96
SKP1-204ENST00000517691 ARL14EPQ8N8R7 260 aaPredicted RBP2.83□□□□□ -1.96
SKP1-204ENST00000517691 ZNF610Q8N9Z0 462 aa2.83□□□□□ -1.96
SKP1-204ENST00000517691 KCTD6Q8NC69 237 aa2.83□□□□□ -1.96
SKP1-204ENST00000517691 ZNF540Q8NDQ6 660 aa2.83□□□□□ -1.96
SKP1-204ENST00000517691 ZNF397Q8NF99 534 aaPredicted RBP2.83□□□□□ -1.96
SKP1-204ENST00000517691 TOR1AIP2Q8NFQ8 470 aa2.83□□□□□ -1.96
SKP1-204ENST00000517691 GSDMBQ8TAX9 411 aa2.83□□□□□ -1.96
SKP1-204ENST00000517691 FNIP1Q8TF40 1166 aa2.83□□□□□ -1.96
SKP1-204ENST00000517691 ZNF606Q8WXB4 792 aa2.83□□□□□ -1.96
SKP1-204ENST00000517691 SHC3Q92529 594 aa2.83□□□□□ -1.96
SKP1-204ENST00000517691 NDRG1Q92597 394 aaKnown RBP2.83□□□□□ -1.96
SKP1-204ENST00000517691 RUBCNQ92622 972 aa2.83□□□□□ -1.96
SKP1-204ENST00000517691 SMARCD2Q92925 531 aa2.83□□□□□ -1.96
SKP1-204ENST00000517691 CEP295NLQ96MC4 621 aa2.83□□□□□ -1.96
SKP1-204ENST00000517691 TMEM237Q96Q45 408 aa2.83□□□□□ -1.96
SKP1-204ENST00000517691 ERGIC2Q96RQ1 377 aa2.83□□□□□ -1.96
SKP1-204ENST00000517691 KCNJ15Q99712 375 aa2.83□□□□□ -1.96
SKP1-204ENST00000517691 CDADC1Q9BWV3 514 aa2.83□□□□□ -1.96
SKP1-204ENST00000517691 JAM3Q9BX67 310 aa2.83□□□□□ -1.96
SKP1-204ENST00000517691 SLC46A2Q9BY10 475 aa2.83□□□□□ -1.96
SKP1-204ENST00000517691 UBXN6Q9BZV1 441 aa2.83□□□□□ -1.96
SKP1-204ENST00000517691 CD244Q9BZW8 370 aa2.83□□□□□ -1.96
SKP1-204ENST00000517691 GPR88Q9GZN0 384 aa2.83□□□□□ -1.96
SKP1-204ENST00000517691 MIS12Q9H081 205 aa2.83□□□□□ -1.96
SKP1-204ENST00000517691 GANQ9H2C0 597 aa2.83□□□□□ -1.96
SKP1-204ENST00000517691 TASP1Q9H6P5 420 aa2.83□□□□□ -1.96
SKP1-204ENST00000517691 ZFP14Q9HCL3 533 aa2.83□□□□□ -1.96
SKP1-204ENST00000517691 CSNK1G1Q9HCP0 422 aa2.83□□□□□ -1.96
SKP1-204ENST00000517691 CD320Q9NPF0 282 aa2.83□□□□□ -1.96
SKP1-204ENST00000517691 TLR8Q9NR97 1041 aaKnown RBP2.83□□□□□ -1.96
SKP1-204ENST00000517691 TDP1Q9NUW8 608 aa2.83□□□□□ -1.96
SKP1-204ENST00000517691 IGSF9Q9P2J2 1179 aa2.83□□□□□ -1.96
SKP1-204ENST00000517691 CPNE7Q9UBL6 633 aa2.83□□□□□ -1.96
SKP1-204ENST00000517691 MUTYHQ9UIF7 546 aa2.83□□□□□ -1.96
SKP1-204ENST00000517691 SH3BGRL2Q9UJC5 107 aa2.83□□□□□ -1.96
SKP1-204ENST00000517691 AJAP1Q9UKB5 411 aaPredicted RBP2.83□□□□□ -1.96
SKP1-204ENST00000517691 CNTN6Q9UQ52 1028 aa2.83□□□□□ -1.96
SKP1-204ENST00000517691 NUMBLQ9Y6R0 609 aa2.83□□□□□ -1.96
SKP1-204ENST00000517691 KIAA1671Q9BY89 1806 aa2.83□□□□□ -1.96
SKP1-204ENST00000517691 MYO9BQ13459 2157 aa2.83□□□□□ -1.96
SKP1-204ENST00000517691 NLRC5Q86WI3 1866 aa2.83□□□□□ -1.96
SKP1-204ENST00000517691 HEPACAM2A8MVW5 462 aa2.83□□□□□ -1.96
SKP1-204ENST00000517691 HHLA1C9JL84 531 aa2.83□□□□□ -1.96
SKP1-204ENST00000517691 FAM47E-STBD1D6RA91 191 aa2.83□□□□□ -1.96
SKP1-204ENST00000517691 F8VZ95 297 aa2.83□□□□□ -1.96
SKP1-204ENST00000517691 H0Y626 953 aa2.83□□□□□ -1.96
SKP1-204ENST00000517691 H3BS24 57 aa2.83□□□□□ -1.96
SKP1-204ENST00000517691 AP3D1O14617 1153 aa2.83□□□□□ -1.96
SKP1-204ENST00000517691 XPO1O14980 1071 aaKnown RBP2.83□□□□□ -1.96
SKP1-204ENST00000517691 MTSS1O43312 755 aa2.83□□□□□ -1.96
SKP1-204ENST00000517691 HTRA2O43464 458 aaPredicted RBP2.83□□□□□ -1.96
SKP1-204ENST00000517691 SRGAP2O75044 1071 aa2.83□□□□□ -1.96
SKP1-204ENST00000517691 MOSPD3O75425 235 aa2.83□□□□□ -1.96
SKP1-204ENST00000517691 ENDOD1O94919 500 aa2.83□□□□□ -1.96
SKP1-204ENST00000517691 HMBSP08397 361 aa2.83□□□□□ -1.96
SKP1-204ENST00000517691 TPM1P09493 284 aa2.83□□□□□ -1.96
SKP1-204ENST00000517691 CCDC172P0C7W6 258 aa2.83□□□□□ -1.96
SKP1-204ENST00000517691 KITP10721 976 aa2.83□□□□□ -1.96
SKP1-204ENST00000517691 IRF1P10914 325 aa2.83□□□□□ -1.96
SKP1-204ENST00000517691 MBL2P11226 248 aaPredicted RBP2.83□□□□□ -1.96
SKP1-204ENST00000517691 RALAP11233 206 aa2.83□□□□□ -1.96
SKP1-204ENST00000517691 RARGP13631 454 aa2.83□□□□□ -1.96
SKP1-204ENST00000517691 ALADP13716 330 aa2.83□□□□□ -1.96
SKP1-204ENST00000517691 CYP11B1P15538 503 aa2.83□□□□□ -1.96
SKP1-204ENST00000517691 DDX6P26196 483 aaKnown RBP eCLIP2.83□□□□□ -1.96
SKP1-204ENST00000517691 GRK3P35626 688 aa2.83□□□□□ -1.96
SKP1-204ENST00000517691 CCR9P51686 369 aa2.83□□□□□ -1.96
SKP1-204ENST00000517691 MAP2K6P52564 334 aa2.83□□□□□ -1.96
SKP1-204ENST00000517691 KIF11P52732 1056 aa2.83□□□□□ -1.96
SKP1-204ENST00000517691 EPHA5P54756 1037 aa2.83□□□□□ -1.96
SKP1-204ENST00000517691 JAM2P57087 298 aa2.83□□□□□ -1.96
SKP1-204ENST00000517691 YBEYP58557 167 aaPredicted RBP2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms