RNA–Protein interactions for RNA: ENST00000517434.2

PCDHGA6-201, Transcript of protocadherin gamma subfamily A, 6, humanhuman

TSL 1 (best) BASIC

Gene PCDHGA6, Length 4,775 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6-201ENST00000517434 FAXDC2Q96IV6 333 aa12.29□□□□□ -0.44
PCDHGA6-201ENST00000517434 SERAC1Q96JX3 654 aa12.29□□□□□ -0.44
PCDHGA6-201ENST00000517434 MAGEB10Q96LZ2 347 aaPredicted RBP12.29□□□□□ -0.44
PCDHGA6-201ENST00000517434 KIFC1Q9BW19 673 aa12.29□□□□□ -0.44
PCDHGA6-201ENST00000517434 NMRAL1Q9HBL8 299 aa12.29□□□□□ -0.44
PCDHGA6-201ENST00000517434 FBXO6Q9NRD1 293 aaPredicted RBP12.29□□□□□ -0.44
PCDHGA6-201ENST00000517434 PARP4Q9UKK3 1724 aaKnown RBP12.29□□□□□ -0.44
PCDHGA6-201ENST00000517434 LOC110117498-PIK3R3F6TDL0 507 aa12.29□□□□□ -0.44
PCDHGA6-201ENST00000517434 TBL1XO60907 577 aa12.29□□□□□ -0.44
PCDHGA6-201ENST00000517434 PABPC1P11940 636 aaKnown RBP12.29□□□□□ -0.44
PCDHGA6-201ENST00000517434 CCL5P13501 91 aa12.29□□□□□ -0.44
PCDHGA6-201ENST00000517434 ACADVLP49748 655 aa12.29□□□□□ -0.44
PCDHGA6-201ENST00000517434 RPS7P62081 194 aaKnown RBP12.29□□□□□ -0.44
PCDHGA6-201ENST00000517434 OLR1P78380 273 aa12.29□□□□□ -0.44
PCDHGA6-201ENST00000517434 ALDH6A1Q02252 535 aaKnown RBP12.29□□□□□ -0.44
PCDHGA6-201ENST00000517434 TLE2Q04725 743 aa12.29□□□□□ -0.44
PCDHGA6-201ENST00000517434 CSHL1Q14406 222 aa12.29□□□□□ -0.44
PCDHGA6-201ENST00000517434 TEAD4Q15561 434 aa12.29□□□□□ -0.44
PCDHGA6-201ENST00000517434 PYDC2Q56P42 97 aa12.29□□□□□ -0.44
PCDHGA6-201ENST00000517434 SPANXN3Q5MJ09 141 aa12.29□□□□□ -0.44
PCDHGA6-201ENST00000517434 HYIQ5T013 277 aa12.29□□□□□ -0.44
PCDHGA6-201ENST00000517434 ZNF544Q6NX49 715 aa12.29□□□□□ -0.44
PCDHGA6-201ENST00000517434 SPPL2AQ8TCT8 520 aa12.29□□□□□ -0.44
PCDHGA6-201ENST00000517434 CELF6Q96J87 481 aaKnown RBP12.29□□□□□ -0.44
PCDHGA6-201ENST00000517434 SMAD5Q99717 465 aaKnown RBP12.29□□□□□ -0.44
PCDHGA6-201ENST00000517434 DUSP16Q9BY84 665 aa12.29□□□□□ -0.44
PCDHGA6-201ENST00000517434 CXorf21Q9HAI6 301 aa12.29□□□□□ -0.44
PCDHGA6-201ENST00000517434 ANKRD6Q9Y2G4 727 aa12.29□□□□□ -0.44
PCDHGA6-201ENST00000517434 ASTN2O75129 1339 aaPredicted RBP12.29□□□□□ -0.44
PCDHGA6-201ENST00000517434 ATF6P18850 670 aa12.29□□□□□ -0.44
PCDHGA6-201ENST00000517434 FEN1P39748 380 aaKnown RBP12.29□□□□□ -0.44
PCDHGA6-201ENST00000517434 INSCQ1MX18 579 aa12.29□□□□□ -0.44
PCDHGA6-201ENST00000517434 BMT2Q1RMZ1 405 aa12.29□□□□□ -0.44
PCDHGA6-201ENST00000517434 C6orf183Q5T699 404 aa12.29□□□□□ -0.44
PCDHGA6-201ENST00000517434 FUT10Q6P4F1 479 aa12.29□□□□□ -0.44
PCDHGA6-201ENST00000517434 NCCRP1Q6ZVX7 275 aaPredicted RBP12.29□□□□□ -0.44
PCDHGA6-201ENST00000517434 HIPK1Q86Z02 1210 aa12.29□□□□□ -0.44
PCDHGA6-201ENST00000517434 ZNF540Q8NDQ6 660 aa12.29□□□□□ -0.44
PCDHGA6-201ENST00000517434 OR8H1Q8NGG4 311 aa12.29□□□□□ -0.44
PCDHGA6-201ENST00000517434 CREBZFQ9NS37 354 aa12.29□□□□□ -0.44
PCDHGA6-201ENST00000517434 TDRKHQ9Y2W6 561 aaKnown RBP12.29□□□□□ -0.44
PCDHGA6-201ENST00000517434 HES2Q9Y543 173 aa12.29□□□□□ -0.44
PCDHGA6-201ENST00000517434 FADS3Q9Y5Q0 445 aa12.29□□□□□ -0.44
PCDHGA6-201ENST00000517434 A0A0U1RQJ8 604 aa12.29□□□□□ -0.44
PCDHGA6-201ENST00000517434 SMPD1P17405 629 aa12.29□□□□□ -0.44
PCDHGA6-201ENST00000517434 BTN2A1Q7KYR7 527 aa12.29□□□□□ -0.44
PCDHGA6-201ENST00000517434 SAPCD2Q86UD0 394 aa12.29□□□□□ -0.44
PCDHGA6-201ENST00000517434 C11orf74Q86VG3 221 aa12.29□□□□□ -0.44
PCDHGA6-201ENST00000517434 IRGQQ8WZA9 623 aa12.29□□□□□ -0.44
PCDHGA6-201ENST00000517434 ART4Q93070 314 aa12.29□□□□□ -0.44
PCDHGA6-201ENST00000517434 DPY30Q9C005 99 aa12.29□□□□□ -0.44
PCDHGA6-201ENST00000517434 REEP1Q9H902 201 aa12.29□□□□□ -0.44
PCDHGA6-201ENST00000517434 KLHL28Q9NXS3 571 aa12.29□□□□□ -0.44
PCDHGA6-201ENST00000517434 EMC3Q9P0I2 261 aa12.29□□□□□ -0.44
PCDHGA6-201ENST00000517434 URADA6NGE7 173 aa12.28□□□□□ -0.44
PCDHGA6-201ENST00000517434 APOC4-APOC2K7ER74 178 aa12.28□□□□□ -0.44
PCDHGA6-201ENST00000517434 APOC2P02655 101 aa12.28□□□□□ -0.44
PCDHGA6-201ENST00000517434 PPP2R1BP30154 601 aa12.28□□□□□ -0.44
PCDHGA6-201ENST00000517434 BCAP31P51572 246 aa12.28□□□□□ -0.44
PCDHGA6-201ENST00000517434 ZNF143P52747 638 aaPredicted RBP12.28□□□□□ -0.44
PCDHGA6-201ENST00000517434 STX4Q12846 297 aa12.28□□□□□ -0.44
PCDHGA6-201ENST00000517434 C9orf57Q5W0N0 161 aa12.28□□□□□ -0.44
PCDHGA6-201ENST00000517434 TPGS2Q68CL5 300 aa12.28□□□□□ -0.44
PCDHGA6-201ENST00000517434 MFSD5Q6N075 450 aa12.28□□□□□ -0.44
PCDHGA6-201ENST00000517434 SATL1Q86VE3 508 aa12.28□□□□□ -0.44
PCDHGA6-201ENST00000517434 AADATQ8N5Z0 425 aa12.28□□□□□ -0.44
PCDHGA6-201ENST00000517434 ASB2Q96Q27 587 aa12.28□□□□□ -0.44
PCDHGA6-201ENST00000517434 EPB41L4BQ9H329 900 aa12.28□□□□□ -0.44
PCDHGA6-201ENST00000517434 COMMD9Q9P000 198 aa12.28□□□□□ -0.44
PCDHGA6-201ENST00000517434 PSME2Q9UL46 239 aa12.28□□□□□ -0.44
PCDHGA6-201ENST00000517434 GMPPBQ9Y5P6 360 aa12.28□□□□□ -0.44
PCDHGA6-201ENST00000517434 DHRS12A0PJE2 317 aa12.28□□□□□ -0.44
PCDHGA6-201ENST00000517434 TREHO43280 583 aa12.28□□□□□ -0.44
PCDHGA6-201ENST00000517434 PRMT3O60678 531 aa12.28□□□□□ -0.44
PCDHGA6-201ENST00000517434 SNRPB2P08579 225 aaKnown RBP12.28□□□□□ -0.44
PCDHGA6-201ENST00000517434 GSTM1P09488 218 aa12.28□□□□□ -0.44
PCDHGA6-201ENST00000517434 DGKAP23743 735 aa12.28□□□□□ -0.44
PCDHGA6-201ENST00000517434 AKIRIN2Q53H80 203 aa12.28□□□□□ -0.44
PCDHGA6-201ENST00000517434 ERICH5Q6P6B1 374 aa12.28□□□□□ -0.44
PCDHGA6-201ENST00000517434 RBM23Q86U06 439 aaKnown RBP12.28□□□□□ -0.44
PCDHGA6-201ENST00000517434 CAMKK1Q8N5S9 505 aa12.28□□□□□ -0.44
PCDHGA6-201ENST00000517434 DUSP9Q99956 384 aaKnown RBP12.28□□□□□ -0.44
PCDHGA6-201ENST00000517434 TBL1YQ9BQ87 522 aa12.28□□□□□ -0.44
PCDHGA6-201ENST00000517434 CMTM6Q9NX76 183 aa12.28□□□□□ -0.44
PCDHGA6-201ENST00000517434 SLC27A6Q9Y2P4 619 aa12.28□□□□□ -0.44
PCDHGA6-201ENST00000517434 SMIM28A0A1B0GU29 152 aa12.28□□□□□ -0.44
PCDHGA6-201ENST00000517434 NELFEP18615 380 aaKnown RBP12.28□□□□□ -0.44
PCDHGA6-201ENST00000517434 GPR1P46091 355 aa12.28□□□□□ -0.44
PCDHGA6-201ENST00000517434 ELP6Q0PNE2 266 aa12.28□□□□□ -0.44
PCDHGA6-201ENST00000517434 ZC3H12AQ5D1E8 599 aaKnown RBP12.28□□□□□ -0.44
PCDHGA6-201ENST00000517434 RAP1GAP2Q684P5 730 aa12.28□□□□□ -0.44
PCDHGA6-201ENST00000517434 WDR59Q6PJI9 974 aa12.28□□□□□ -0.44
PCDHGA6-201ENST00000517434 C16orf59Q7L2K0 433 aa12.28□□□□□ -0.44
PCDHGA6-201ENST00000517434 TRABD2AQ86V40 505 aa12.28□□□□□ -0.44
PCDHGA6-201ENST00000517434 TRAPPC5Q8IUR0 188 aa12.28□□□□□ -0.44
PCDHGA6-201ENST00000517434 AP3S1Q92572 193 aa12.28□□□□□ -0.44
PCDHGA6-201ENST00000517434 CPNE1Q99829 537 aa12.28□□□□□ -0.44
PCDHGA6-201ENST00000517434 POLMQ9NP87 494 aaPredicted RBP12.28□□□□□ -0.44
PCDHGA6-201ENST00000517434 TRPV5Q9NQA5 729 aa12.28□□□□□ -0.44
PCDHGA6-201ENST00000517434 TBCCD1Q9NVR7 557 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms