RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 PDZD7Q9H5P4 517 aa10.88□□□□□ -0.67
PCDHGA1-202ENST00000517417 USP29Q9HBJ7 922 aa10.88□□□□□ -0.67
PCDHGA1-202ENST00000517417 MIEF1Q9NQG6 463 aa10.88□□□□□ -0.67
PCDHGA1-202ENST00000517417 PLK2Q9NYY3 685 aa10.88□□□□□ -0.67
PCDHGA1-202ENST00000517417 CNTRLQ7Z7A1 2325 aa10.87□□□□□ -0.67
PCDHGA1-202ENST00000517417 KANSL1LA0AUZ9 987 aa10.87□□□□□ -0.67
PCDHGA1-202ENST00000517417 MSCO60682 206 aa10.87□□□□□ -0.67
PCDHGA1-202ENST00000517417 CHRNGP07510 517 aa10.87□□□□□ -0.67
PCDHGA1-202ENST00000517417 MAPK1P28482 360 aa10.87□□□□□ -0.67
PCDHGA1-202ENST00000517417 RPL9P32969 192 aaKnown RBP10.87□□□□□ -0.67
PCDHGA1-202ENST00000517417 GRIA3P42263 894 aa10.87□□□□□ -0.67
PCDHGA1-202ENST00000517417 TRPC1P48995 793 aa10.87□□□□□ -0.67
PCDHGA1-202ENST00000517417 DUSP4Q13115 394 aa10.87□□□□□ -0.67
PCDHGA1-202ENST00000517417 SEMA5AQ13591 1074 aa10.87□□□□□ -0.67
PCDHGA1-202ENST00000517417 ATP1A4Q13733 1029 aa10.87□□□□□ -0.67
PCDHGA1-202ENST00000517417 ACOX1Q15067 660 aa10.87□□□□□ -0.67
PCDHGA1-202ENST00000517417 ARL13AQ5H913 290 aaPredicted RBP10.87□□□□□ -0.67
PCDHGA1-202ENST00000517417 FSTL4Q6MZW2 842 aa10.87□□□□□ -0.67
PCDHGA1-202ENST00000517417 BBS7Q8IWZ6 715 aa10.87□□□□□ -0.67
PCDHGA1-202ENST00000517417 TMEM192Q8IY95 271 aa10.87□□□□□ -0.67
PCDHGA1-202ENST00000517417 DDX28Q9NUL7 540 aaKnown RBP10.87□□□□□ -0.67
PCDHGA1-202ENST00000517417 UXTQ9UBK9 157 aaPredicted RBP10.87□□□□□ -0.67
PCDHGA1-202ENST00000517417 DNMT3LQ9UJW3 386 aa10.87□□□□□ -0.67
PCDHGA1-202ENST00000517417 TDRKHQ9Y2W6 561 aaKnown RBP10.87□□□□□ -0.67
PCDHGA1-202ENST00000517417 SNX8Q9Y5X2 465 aa10.87□□□□□ -0.67
PCDHGA1-202ENST00000517417 FZD9O00144 591 aa10.87□□□□□ -0.67
PCDHGA1-202ENST00000517417 NFKBIEO00221 500 aa10.87□□□□□ -0.67
PCDHGA1-202ENST00000517417 CLOCKO15516 846 aa10.87□□□□□ -0.67
PCDHGA1-202ENST00000517417 LTA4HP09960 611 aaKnown RBP10.87□□□□□ -0.67
PCDHGA1-202ENST00000517417 S100A5P33763 92 aa10.87□□□□□ -0.67
PCDHGA1-202ENST00000517417 BLVRAP53004 296 aa10.87□□□□□ -0.67
PCDHGA1-202ENST00000517417 LIMK2P53671 638 aa10.87□□□□□ -0.67
PCDHGA1-202ENST00000517417 WNT3AP56704 352 aa10.87□□□□□ -0.67
PCDHGA1-202ENST00000517417 RALGDSQ12967 914 aa10.87□□□□□ -0.67
PCDHGA1-202ENST00000517417 LSAMPQ13449 338 aa10.87□□□□□ -0.67
PCDHGA1-202ENST00000517417 NEDD8Q15843 81 aa10.87□□□□□ -0.67
PCDHGA1-202ENST00000517417 PSMD5Q16401 504 aa10.87□□□□□ -0.67
PCDHGA1-202ENST00000517417 FAM110CQ1W6H9 321 aa10.87□□□□□ -0.67
PCDHGA1-202ENST00000517417 MTX3Q5HYI7 312 aa10.87□□□□□ -0.67
PCDHGA1-202ENST00000517417 FAM91A1Q658Y4 838 aa10.87□□□□□ -0.67
PCDHGA1-202ENST00000517417 DOK6Q6PKX4 331 aa10.87□□□□□ -0.67
PCDHGA1-202ENST00000517417 OOSP2Q86WS3 158 aa10.87□□□□□ -0.67
PCDHGA1-202ENST00000517417 CCDC185Q8N715 623 aa10.87□□□□□ -0.67
PCDHGA1-202ENST00000517417 PQLC3Q8N755 202 aa10.87□□□□□ -0.67
PCDHGA1-202ENST00000517417 ZFYVE19Q96K21 471 aa10.87□□□□□ -0.67
PCDHGA1-202ENST00000517417 CIB1Q99828 191 aa10.87□□□□□ -0.67
PCDHGA1-202ENST00000517417 MLPHQ9BV36 600 aaPredicted RBP10.87□□□□□ -0.67
PCDHGA1-202ENST00000517417 ZDHHC6Q9H6R6 413 aa10.87□□□□□ -0.67
PCDHGA1-202ENST00000517417 TK2O00142 265 aa10.87□□□□□ -0.67
PCDHGA1-202ENST00000517417 SNNO75324 88 aaPredicted RBP10.87□□□□□ -0.67
PCDHGA1-202ENST00000517417 SPATA31D3P0C874 917 aa10.87□□□□□ -0.67
PCDHGA1-202ENST00000517417 FASP25445 335 aa10.87□□□□□ -0.67
PCDHGA1-202ENST00000517417 RABGGTBP53611 331 aa10.87□□□□□ -0.67
PCDHGA1-202ENST00000517417 ZNF280AP59817 542 aaPredicted RBP10.87□□□□□ -0.67
PCDHGA1-202ENST00000517417 IRF9Q00978 393 aa10.87□□□□□ -0.67
PCDHGA1-202ENST00000517417 CNTN1Q12860 1018 aa10.87□□□□□ -0.67
PCDHGA1-202ENST00000517417 TP53BP2Q13625 1128 aa10.87□□□□□ -0.67
PCDHGA1-202ENST00000517417 PCBP1Q15365 356 aaKnown RBP eCLIP10.87□□□□□ -0.67
PCDHGA1-202ENST00000517417 TARBP2Q15633 366 aaKnown RBP10.87□□□□□ -0.67
PCDHGA1-202ENST00000517417 TEX44Q53QW1 395 aa10.87□□□□□ -0.67
PCDHGA1-202ENST00000517417 SPATA31D4Q6ZUB0 917 aa10.87□□□□□ -0.67
PCDHGA1-202ENST00000517417 CROCCP3Q8IVE0 287 aa10.87□□□□□ -0.67
PCDHGA1-202ENST00000517417 PHC3Q8NDX5 983 aa10.87□□□□□ -0.67
PCDHGA1-202ENST00000517417 OR6K2Q8NGY2 324 aa10.87□□□□□ -0.67
PCDHGA1-202ENST00000517417 SLC25A23Q9BV35 468 aa10.87□□□□□ -0.67
PCDHGA1-202ENST00000517417 DTLQ9NZJ0 730 aa10.87□□□□□ -0.67
PCDHGA1-202ENST00000517417 TRPC4Q9UBN4 977 aa10.87□□□□□ -0.67
PCDHGA1-202ENST00000517417 KLQ9UEF7 1012 aa10.87□□□□□ -0.67
PCDHGA1-202ENST00000517417 LIMD1Q9UGP4 676 aa10.87□□□□□ -0.67
PCDHGA1-202ENST00000517417 PADI3Q9ULW8 664 aa10.87□□□□□ -0.67
PCDHGA1-202ENST00000517417 MAP1BP46821 2468 aaKnown RBP10.87□□□□□ -0.67
PCDHGA1-202ENST00000517417 SMIM35A0A1B0GVV1 85 aa10.86□□□□□ -0.67
PCDHGA1-202ENST00000517417 CCDC154A6NI56 674 aa10.86□□□□□ -0.67
PCDHGA1-202ENST00000517417 ADCY6O43306 1168 aa10.86□□□□□ -0.67
PCDHGA1-202ENST00000517417 PAGE1O75459 146 aa10.86□□□□□ -0.67
PCDHGA1-202ENST00000517417 CABYRO75952 493 aa10.86□□□□□ -0.67
PCDHGA1-202ENST00000517417 GSTM1P09488 218 aa10.86□□□□□ -0.67
PCDHGA1-202ENST00000517417 CCT8P50990 548 aa10.86□□□□□ -0.67
PCDHGA1-202ENST00000517417 SP2Q02086 613 aa10.86□□□□□ -0.67
PCDHGA1-202ENST00000517417 ALDH6A1Q02252 535 aaKnown RBP10.86□□□□□ -0.67
PCDHGA1-202ENST00000517417 RUNX1T1Q06455 604 aa10.86□□□□□ -0.67
PCDHGA1-202ENST00000517417 FSTL1Q12841 308 aa10.86□□□□□ -0.67
PCDHGA1-202ENST00000517417 TUSC3Q13454 348 aa10.86□□□□□ -0.67
PCDHGA1-202ENST00000517417 PABPC1LQ4VXU2 614 aaKnown RBP10.86□□□□□ -0.67
PCDHGA1-202ENST00000517417 TMEM198Q66K66 360 aa10.86□□□□□ -0.67
PCDHGA1-202ENST00000517417 DCLRE1AQ6PJP8 1040 aa10.86□□□□□ -0.67
PCDHGA1-202ENST00000517417 STK32CQ86UX6 486 aa10.86□□□□□ -0.67
PCDHGA1-202ENST00000517417 FAM47BQ8NA70 645 aa10.86□□□□□ -0.67
PCDHGA1-202ENST00000517417 STAG3L4Q8TBR4 150 aa10.86□□□□□ -0.67
PCDHGA1-202ENST00000517417 SPPL2AQ8TCT8 520 aa10.86□□□□□ -0.67
PCDHGA1-202ENST00000517417 AGAP2Q99490 1192 aa10.86□□□□□ -0.67
PCDHGA1-202ENST00000517417 SH3GL1Q99961 368 aa10.86□□□□□ -0.67
PCDHGA1-202ENST00000517417 PLGRKTQ9HBL7 147 aa10.86□□□□□ -0.67
PCDHGA1-202ENST00000517417 SPAG4Q9NPE6 437 aa10.86□□□□□ -0.67
PCDHGA1-202ENST00000517417 VPS45Q9NRW7 570 aa10.86□□□□□ -0.67
PCDHGA1-202ENST00000517417 GIT1Q9Y2X7 761 aa10.86□□□□□ -0.67
PCDHGA1-202ENST00000517417 PCDHB9Q9Y5E1 797 aa10.86□□□□□ -0.67
PCDHGA1-202ENST00000517417 PTCH2Q9Y6C5 1203 aa10.86□□□□□ -0.67
PCDHGA1-202ENST00000517417 KDM1AO60341 852 aa10.86□□□□□ -0.67
PCDHGA1-202ENST00000517417 TSPAN1O60635 241 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms