RNA–Protein interactions for RNA: ENST00000514929.1

SNF8-213, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 775 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-213ENST00000514929 KLQ9UEF7 1012 aa24.56■■□□□ 1.52
SNF8-213ENST00000514929 AMACRQ9UHK6 382 aa24.56■■□□□ 1.52
SNF8-213ENST00000514929 DOLKQ9UPQ8 538 aa24.56■■□□□ 1.52
SNF8-213ENST00000514929 CLCA2Q9UQC9 943 aa24.56■■□□□ 1.52
SNF8-213ENST00000514929 GOLGA4Q13439 2230 aaKnown RBP24.55■■□□□ 1.52
SNF8-213ENST00000514929 LY6G6EA0A0G2JKS1 128 aa24.55■■□□□ 1.52
SNF8-213ENST00000514929 ZNF487B1APH4 448 aa24.55■■□□□ 1.52
SNF8-213ENST00000514929 LMO7DNF2Z398 122 aa24.55■■□□□ 1.52
SNF8-213ENST00000514929 CACNB4O00305 520 aaPredicted RBP24.55■■□□□ 1.52
SNF8-213ENST00000514929 HEXIM1O94992 359 aaKnown RBP24.55■■□□□ 1.52
SNF8-213ENST00000514929 KRT10P13645 584 aa24.55■■□□□ 1.52
SNF8-213ENST00000514929 TNNT1P13805 278 aa24.55■■□□□ 1.52
SNF8-213ENST00000514929 TSHRP16473 764 aa24.55■■□□□ 1.52
SNF8-213ENST00000514929 GM2AP17900 193 aa24.55■■□□□ 1.52
SNF8-213ENST00000514929 CES1P23141 567 aa24.55■■□□□ 1.52
SNF8-213ENST00000514929 SLC1A1P43005 524 aa24.55■■□□□ 1.52
SNF8-213ENST00000514929 MAGEA1P43355 309 aa24.55■■□□□ 1.52
SNF8-213ENST00000514929 DSC2Q02487 901 aa24.55■■□□□ 1.52
SNF8-213ENST00000514929 SLC10A2Q12908 348 aaPredicted RBP24.55■■□□□ 1.52
SNF8-213ENST00000514929 TCEAL1Q15170 157 aa24.55■■□□□ 1.52
SNF8-213ENST00000514929 USP45Q70EL2 814 aa24.55■■□□□ 1.52
SNF8-213ENST00000514929 RHOT1Q8IXI2 618 aa24.55■■□□□ 1.52
SNF8-213ENST00000514929 NDUFAF2Q8N183 169 aa24.55■■□□□ 1.52
SNF8-213ENST00000514929 FSTL5Q8N475 847 aaPredicted RBP24.55■■□□□ 1.52
SNF8-213ENST00000514929 GLMNQ92990 594 aa24.55■■□□□ 1.52
SNF8-213ENST00000514929 HDAC11Q96DB2 347 aa24.55■■□□□ 1.52
SNF8-213ENST00000514929 NUS1Q96E22 293 aa24.55■■□□□ 1.52
SNF8-213ENST00000514929 SCRN2Q96FV2 425 aa24.55■■□□□ 1.52
SNF8-213ENST00000514929 COQ10AQ96MF6 247 aa24.55■■□□□ 1.52
SNF8-213ENST00000514929 CLPBQ9H078 707 aa24.55■■□□□ 1.52
SNF8-213ENST00000514929 HEY1Q9Y5J3 304 aa24.55■■□□□ 1.52
SNF8-213ENST00000514929 U3KQA8 63 aa24.55■■□□□ 1.52
SNF8-213ENST00000514929 FREM2Q5SZK8 3169 aa24.54■■□□□ 1.52
SNF8-213ENST00000514929 TAF4O00268 1085 aa24.54■■□□□ 1.52
SNF8-213ENST00000514929 SPOPO43791 374 aa24.54■■□□□ 1.52
SNF8-213ENST00000514929 GP1BAP07359 652 aa24.54■■□□□ 1.52
SNF8-213ENST00000514929 CTPS1P17812 591 aa24.54■■□□□ 1.52
SNF8-213ENST00000514929 NOP2P46087 812 aaKnown RBP24.54■■□□□ 1.52
SNF8-213ENST00000514929 SRP54P61011 504 aaKnown RBP24.54■■□□□ 1.52
SNF8-213ENST00000514929 CYP4F3Q08477 520 aa24.54■■□□□ 1.52
SNF8-213ENST00000514929 ARHGEF7Q14155 803 aa24.54■■□□□ 1.52
SNF8-213ENST00000514929 ELOCQ15369 112 aa24.54■■□□□ 1.52
SNF8-213ENST00000514929 CDKN3Q16667 212 aa24.54■■□□□ 1.52
SNF8-213ENST00000514929 LRRC38Q5VT99 294 aa24.54■■□□□ 1.52
SNF8-213ENST00000514929 ESRP1Q6NXG1 681 aaKnown RBP24.54■■□□□ 1.52
SNF8-213ENST00000514929 VSIG1Q86XK7 387 aa24.54■■□□□ 1.52
SNF8-213ENST00000514929 CCDC13Q8IYE1 715 aa24.54■■□□□ 1.52
SNF8-213ENST00000514929 IFI44Q8TCB0 444 aa24.54■■□□□ 1.52
SNF8-213ENST00000514929 FUBP1Q96AE4 644 aaKnown RBP24.54■■□□□ 1.52
SNF8-213ENST00000514929 KCTD5Q9NXV2 234 aa24.54■■□□□ 1.52
SNF8-213ENST00000514929 HYOU1Q9Y4L1 999 aa24.54■■□□□ 1.52
SNF8-213ENST00000514929 CPED1A4D0V7 1026 aa24.53■■□□□ 1.52
SNF8-213ENST00000514929 NPIPB15A6NHN6 443 aaPredicted RBP24.53■■□□□ 1.52
SNF8-213ENST00000514929 APOL1O14791 398 aa24.53■■□□□ 1.52
SNF8-213ENST00000514929 YY2O15391 372 aa24.53■■□□□ 1.52
SNF8-213ENST00000514929 PDHA1P08559 390 aa24.53■■□□□ 1.52
SNF8-213ENST00000514929 ALPIP09923 528 aa24.53■■□□□ 1.52
SNF8-213ENST00000514929 KELP23276 732 aa24.53■■□□□ 1.52
SNF8-213ENST00000514929 EPHB1P54762 984 aa24.53■■□□□ 1.52
SNF8-213ENST00000514929 KIAA1024LP59773 190 aa24.53■■□□□ 1.52
SNF8-213ENST00000514929 NR0B2Q15466 257 aa24.53■■□□□ 1.52
SNF8-213ENST00000514929 TCEA2Q15560 299 aa24.53■■□□□ 1.52
SNF8-213ENST00000514929 C6orf132Q5T0Z8 1188 aa24.53■■□□□ 1.52
SNF8-213ENST00000514929 ALG1LQ6GMV1 187 aa24.53■■□□□ 1.52
SNF8-213ENST00000514929 PLD5Q8N7P1 536 aa24.53■■□□□ 1.52
SNF8-213ENST00000514929 TPCN2Q8NHX9 752 aa24.53■■□□□ 1.52
SNF8-213ENST00000514929 PIH1D2Q8WWB5 315 aa24.53■■□□□ 1.52
SNF8-213ENST00000514929 RNF25Q96BH1 459 aaPredicted RBP24.53■■□□□ 1.52
SNF8-213ENST00000514929 NXPE2Q96DL1 559 aa24.53■■□□□ 1.52
SNF8-213ENST00000514929 MCCC1Q96RQ3 725 aaPredicted RBP24.53■■□□□ 1.52
SNF8-213ENST00000514929 ABCG4Q9H172 646 aa24.53■■□□□ 1.52
SNF8-213ENST00000514929 RBSNQ9H1K0 784 aa24.53■■□□□ 1.52
SNF8-213ENST00000514929 WDR26Q9H7D7 661 aa24.53■■□□□ 1.52
SNF8-213ENST00000514929 DDX56Q9NY93 547 aaKnown RBP24.53■■□□□ 1.52
SNF8-213ENST00000514929 C3orf70A6NLC5 250 aaPredicted RBP24.52■■□□□ 1.52
SNF8-213ENST00000514929 OPA1O60313 960 aa24.52■■□□□ 1.52
SNF8-213ENST00000514929 FZD6O60353 706 aa24.52■■□□□ 1.52
SNF8-213ENST00000514929 MT-CO3P00414 261 aa24.52■■□□□ 1.52
SNF8-213ENST00000514929 TNFP01375 233 aa24.52■■□□□ 1.52
SNF8-213ENST00000514929 HLA-DQB2P05538 268 aa24.52■■□□□ 1.52
SNF8-213ENST00000514929 COMTP21964 271 aa24.52■■□□□ 1.52
SNF8-213ENST00000514929 CA4P22748 312 aa24.52■■□□□ 1.52
SNF8-213ENST00000514929 LHCGRP22888 699 aa24.52■■□□□ 1.52
SNF8-213ENST00000514929 RPIAP49247 311 aa24.52■■□□□ 1.52
SNF8-213ENST00000514929 ZNF75DP51815 510 aa24.52■■□□□ 1.52
SNF8-213ENST00000514929 PTPRRQ15256 657 aa24.52■■□□□ 1.52
SNF8-213ENST00000514929 SPA17Q15506 151 aa24.52■■□□□ 1.52
SNF8-213ENST00000514929 SLC9A4Q6AI14 798 aa24.52■■□□□ 1.52
SNF8-213ENST00000514929 PNCKQ6P2M8 343 aa24.52■■□□□ 1.52
SNF8-213ENST00000514929 EFL1Q7Z2Z2 1120 aaKnown RBP24.52■■□□□ 1.52
SNF8-213ENST00000514929 TSPAN33Q86UF1 283 aa24.52■■□□□ 1.52
SNF8-213ENST00000514929 RFX6Q8HWS3 928 aa24.52■■□□□ 1.52
SNF8-213ENST00000514929 CACTIN-AS1Q8N1I8 211 aa24.52■■□□□ 1.52
SNF8-213ENST00000514929 OR56A4Q8NGH8 313 aa24.52■■□□□ 1.52
SNF8-213ENST00000514929 SCG3Q8WXD2 468 aaKnown RBP24.52■■□□□ 1.52
SNF8-213ENST00000514929 PDXPQ96GD0 296 aa24.52■■□□□ 1.52
SNF8-213ENST00000514929 LGMNQ99538 433 aa24.52■■□□□ 1.52
SNF8-213ENST00000514929 BOCQ9BWV1 1114 aa24.52■■□□□ 1.52
SNF8-213ENST00000514929 DKK4Q9UBT3 224 aa24.52■■□□□ 1.52
SNF8-213ENST00000514929 PPIL1Q9Y3C6 166 aa24.52■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms